EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000003228 (Gene tree)
Gene ID: 102014496
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 22725 bases
Position: chrJH721899.1:21035825-21058549
Accession: 102014496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000004536	CAF1	PF04857.20	4.9e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000004621	PNLDC1-201	6173	XM_005390708	ENSCLAP00000004536	531 (aa)	XP_005390765	UPI00038EDF7A

Gene Model

Click here to download ENSCLAG00000003228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003228	PNLDC1	99	83.962	ENSG00000146453	PNLDC1	99	83.962	Homo_sapiens
ENSCLAG00000003228	PNLDC1	99	83.144	ENSAMEG00000015371	PNLDC1	99	83.144	Ailuropoda_melanoleuca
ENSCLAG00000003228	PNLDC1	95	59.412	ENSAPLG00000007014	PNLDC1	97	59.412	Anas_platyrhynchos
ENSCLAG00000003228	PNLDC1	99	58.757	ENSACAG00000013667	PNLDC1	99	58.757	Anolis_carolinensis
ENSCLAG00000003228	PNLDC1	99	82.264	ENSANAG00000034713	PNLDC1	100	82.779	Aotus_nancymaae
ENSCLAG00000003228	PNLDC1	95	85.288	ENSBTAG00000015166	PNLDC1	95	85.288	Bos_taurus
ENSCLAG00000003228	PNLDC1	99	82.264	ENSCJAG00000011865	PNLDC1	99	82.264	Callithrix_jacchus
ENSCLAG00000003228	PNLDC1	99	84.848	ENSCAFG00000000740	PNLDC1	99	84.848	Canis_familiaris
ENSCLAG00000003228	PNLDC1	99	82.264	ENSCAFG00020017742	PNLDC1	94	88.291	Canis_lupus_dingo
ENSCLAG00000003228	PNLDC1	99	82.674	ENSCHIG00000003141	PNLDC1	99	82.674	Capra_hircus
ENSCLAG00000003228	PNLDC1	99	81.698	ENSTSYG00000005606	PNLDC1	99	81.698	Carlito_syrichta
ENSCLAG00000003228	PNLDC1	99	69.811	ENSCAPG00000011893	PNLDC1	99	69.811	Cavia_aperea
ENSCLAG00000003228	PNLDC1	99	87.382	ENSCPOG00000019565	PNLDC1	99	87.382	Cavia_porcellus
ENSCLAG00000003228	PNLDC1	99	82.264	ENSCCAG00000026232	PNLDC1	99	82.264	Cebus_capucinus
ENSCLAG00000003228	PNLDC1	99	84.528	ENSCATG00000033196	PNLDC1	99	84.528	Cercocebus_atys
ENSCLAG00000003228	PNLDC1	95	83.268	ENSCSAG00000012478	PNLDC1	97	83.268	Chlorocebus_sabaeus
ENSCLAG00000003228	PNLDC1	96	65.820	ENSCPBG00000004050	PNLDC1	100	65.820	Chrysemys_picta_bellii
ENSCLAG00000003228	PNLDC1	95	84.356	ENSCANG00000043076	PNLDC1	97	84.356	Colobus_angolensis_palliatus
ENSCLAG00000003228	PNLDC1	99	63.019	ENSCGRG00001011981	-	99	63.019	Cricetulus_griseus_chok1gshd
ENSCLAG00000003228	PNLDC1	99	79.434	ENSCGRG00001007470	-	99	79.434	Cricetulus_griseus_chok1gshd
ENSCLAG00000003228	PNLDC1	99	79.434	ENSCGRG00000010221	-	99	79.434	Cricetulus_griseus_crigri
ENSCLAG00000003228	PNLDC1	99	65.472	ENSCGRG00000003103	-	99	65.472	Cricetulus_griseus_crigri
ENSCLAG00000003228	PNLDC1	99	82.955	ENSDNOG00000013709	PNLDC1	99	82.955	Dasypus_novemcinctus
ENSCLAG00000003228	PNLDC1	99	78.987	ENSDORG00000011517	Pnldc1	99	86.262	Dipodomys_ordii
ENSCLAG00000003228	PNLDC1	93	72.819	ENSETEG00000007587	PNLDC1	99	72.819	Echinops_telfairi
ENSCLAG00000003228	PNLDC1	99	78.318	ENSEASG00005019029	PNLDC1	99	78.318	Equus_asinus_asinus
ENSCLAG00000003228	PNLDC1	99	85.606	ENSECAG00000012898	PNLDC1	99	85.606	Equus_caballus
ENSCLAG00000003228	PNLDC1	67	78.125	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
ENSCLAG00000003228	PNLDC1	99	85.985	ENSFCAG00000002848	PNLDC1	99	85.985	Felis_catus
ENSCLAG00000003228	PNLDC1	94	58.847	ENSFALG00000012081	PNLDC1	99	58.847	Ficedula_albicollis
ENSCLAG00000003228	PNLDC1	99	92.642	ENSFDAG00000021334	PNLDC1	99	92.642	Fukomys_damarensis
ENSCLAG00000003228	PNLDC1	79	59.857	ENSGALG00000011624	PNLDC1	82	59.857	Gallus_gallus
ENSCLAG00000003228	PNLDC1	99	66.226	ENSGAGG00000015276	PNLDC1	100	67.355	Gopherus_agassizii
ENSCLAG00000003228	PNLDC1	99	83.774	ENSGGOG00000014077	PNLDC1	99	83.774	Gorilla_gorilla
ENSCLAG00000003228	PNLDC1	99	94.528	ENSHGLG00000006889	PNLDC1	99	94.528	Heterocephalus_glaber_female
ENSCLAG00000003228	PNLDC1	99	94.528	ENSHGLG00100018275	PNLDC1	99	94.528	Heterocephalus_glaber_male
ENSCLAG00000003228	PNLDC1	99	87.335	ENSSTOG00000005595	PNLDC1	99	87.335	Ictidomys_tridecemlineatus
ENSCLAG00000003228	PNLDC1	99	78.558	ENSJJAG00000009937	Pnldc1	99	78.558	Jaculus_jaculus
ENSCLAG00000003228	PNLDC1	59	82.222	ENSLAFG00000030189	PNLDC1	92	82.222	Loxodonta_africana
ENSCLAG00000003228	PNLDC1	99	84.528	ENSMFAG00000041296	PNLDC1	99	84.528	Macaca_fascicularis
ENSCLAG00000003228	PNLDC1	99	84.528	ENSMMUG00000004181	PNLDC1	99	84.528	Macaca_mulatta
ENSCLAG00000003228	PNLDC1	99	84.340	ENSMNEG00000034271	PNLDC1	99	84.340	Macaca_nemestrina
ENSCLAG00000003228	PNLDC1	99	81.887	ENSMLEG00000044059	PNLDC1	99	81.887	Mandrillus_leucophaeus
ENSCLAG00000003228	PNLDC1	95	60.039	ENSMGAG00000012470	PNLDC1	97	60.039	Meleagris_gallopavo
ENSCLAG00000003228	PNLDC1	99	65.226	ENSMAUG00000012298	Pnldc1	100	65.226	Mesocricetus_auratus
ENSCLAG00000003228	PNLDC1	99	82.453	ENSMICG00000008021	PNLDC1	99	82.453	Microcebus_murinus
ENSCLAG00000003228	PNLDC1	99	84.398	ENSMOCG00000014287	Pnldc1	99	84.398	Microtus_ochrogaster
ENSCLAG00000003228	PNLDC1	99	74.291	ENSMODG00000007420	PNLDC1	99	74.291	Monodelphis_domestica
ENSCLAG00000003228	PNLDC1	99	85.606	MGP_CAROLIEiJ_G0021045	Pnldc1	99	85.606	Mus_caroli
ENSCLAG00000003228	PNLDC1	99	85.985	ENSMUSG00000073460	Pnldc1	100	88.254	Mus_musculus
ENSCLAG00000003228	PNLDC1	99	85.444	MGP_PahariEiJ_G0023361	Pnldc1	99	85.444	Mus_pahari
ENSCLAG00000003228	PNLDC1	99	85.227	MGP_SPRETEiJ_G0021975	Pnldc1	99	85.227	Mus_spretus
ENSCLAG00000003228	PNLDC1	99	84.659	ENSMPUG00000004920	PNLDC1	99	84.659	Mustela_putorius_furo
ENSCLAG00000003228	PNLDC1	99	84.091	ENSMLUG00000000747	PNLDC1	99	84.091	Myotis_lucifugus
ENSCLAG00000003228	PNLDC1	99	86.038	ENSNGAG00000017714	Pnldc1	99	86.038	Nannospalax_galili
ENSCLAG00000003228	PNLDC1	95	83.399	ENSNLEG00000011282	PNLDC1	97	83.399	Nomascus_leucogenys
ENSCLAG00000003228	PNLDC1	54	65.278	ENSMEUG00000014042	-	100	65.278	Notamacropus_eugenii
ENSCLAG00000003228	PNLDC1	60	60.938	ENSMEUG00000011926	-	64	60.938	Notamacropus_eugenii
ENSCLAG00000003228	PNLDC1	79	82.447	ENSOPRG00000003813	PNLDC1	79	82.447	Ochotona_princeps
ENSCLAG00000003228	PNLDC1	99	93.573	ENSODEG00000008047	PNLDC1	99	93.573	Octodon_degus
ENSCLAG00000003228	PNLDC1	100	58.083	ENSOANG00000012199	PNLDC1	100	59.586	Ornithorhynchus_anatinus
ENSCLAG00000003228	PNLDC1	99	84.151	ENSOCUG00000013867	PNLDC1	99	84.151	Oryctolagus_cuniculus
ENSCLAG00000003228	PNLDC1	99	83.554	ENSOGAG00000007331	PNLDC1	100	83.554	Otolemur_garnettii
ENSCLAG00000003228	PNLDC1	99	83.019	ENSOARG00000004585	PNLDC1	99	83.019	Ovis_aries
ENSCLAG00000003228	PNLDC1	99	83.396	ENSPPAG00000026651	PNLDC1	99	83.396	Pan_paniscus
ENSCLAG00000003228	PNLDC1	99	85.606	ENSPPRG00000012854	PNLDC1	99	85.606	Panthera_pardus
ENSCLAG00000003228	PNLDC1	99	80.952	ENSPTIG00000011501	PNLDC1	99	80.952	Panthera_tigris_altaica
ENSCLAG00000003228	PNLDC1	99	83.396	ENSPTRG00000018762	PNLDC1	99	83.396	Pan_troglodytes
ENSCLAG00000003228	PNLDC1	99	84.717	ENSPANG00000022009	PNLDC1	99	84.717	Papio_anubis
ENSCLAG00000003228	PNLDC1	99	85.472	ENSPEMG00000016301	Pnldc1	99	85.472	Peromyscus_maniculatus_bairdii
ENSCLAG00000003228	PNLDC1	83	76.310	ENSPCIG00000023412	PNLDC1	100	76.310	Phascolarctos_cinereus
ENSCLAG00000003228	PNLDC1	99	77.944	ENSPPYG00000017148	PNLDC1	99	77.944	Pongo_abelii
ENSCLAG00000003228	PNLDC1	99	72.453	ENSPCAG00000014169	PNLDC1	99	72.453	Procavia_capensis
ENSCLAG00000003228	PNLDC1	99	83.208	ENSPCOG00000025722	PNLDC1	99	83.208	Propithecus_coquereli
ENSCLAG00000003228	PNLDC1	73	88.312	ENSPVAG00000005325	PNLDC1	73	88.312	Pteropus_vampyrus
ENSCLAG00000003228	PNLDC1	99	84.906	ENSRNOG00000023140	Pnldc1	100	89.375	Rattus_norvegicus
ENSCLAG00000003228	PNLDC1	99	84.659	ENSRBIG00000033806	PNLDC1	99	84.659	Rhinopithecus_bieti
ENSCLAG00000003228	PNLDC1	95	84.752	ENSRROG00000043919	PNLDC1	97	84.752	Rhinopithecus_roxellana
ENSCLAG00000003228	PNLDC1	99	82.264	ENSSBOG00000019135	PNLDC1	99	82.264	Saimiri_boliviensis_boliviensis
ENSCLAG00000003228	PNLDC1	95	75.644	ENSSHAG00000015192	PNLDC1	97	75.644	Sarcophilus_harrisii
ENSCLAG00000003228	PNLDC1	54	65.734	ENSSPUG00000004627	PNLDC1	100	65.929	Sphenodon_punctatus
ENSCLAG00000003228	PNLDC1	95	83.432	ENSSSCG00000004046	PNLDC1	99	83.432	Sus_scrofa
ENSCLAG00000003228	PNLDC1	91	59.588	ENSTGUG00000011418	PNLDC1	99	59.588	Taeniopygia_guttata
ENSCLAG00000003228	PNLDC1	96	75.246	ENSTBEG00000009131	PNLDC1	98	75.246	Tupaia_belangeri
ENSCLAG00000003228	PNLDC1	73	80.570	ENSTTRG00000010409	PNLDC1	73	80.570	Tursiops_truncatus
ENSCLAG00000003228	PNLDC1	99	72.097	ENSUAMG00000015783	PNLDC1	99	72.097	Ursus_americanus
ENSCLAG00000003228	PNLDC1	95	76.667	ENSUMAG00000011903	PNLDC1	99	76.667	Ursus_maritimus
ENSCLAG00000003228	PNLDC1	96	85.323	ENSVVUG00000006586	PNLDC1	98	84.504	Vulpes_vulpes