EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000003230 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 1098 bases
Position: chrJH721934.1:8331666-8332763
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000004542	MMR_HSR1	PF01926.23	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000004627	-	948	-	ENSCLAP00000004542	315 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000003230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000003230	-	83	30.892	ENSCLAG00000017190	SEPT3	88	32.215
ENSCLAG00000003230	-	76	30.847	ENSCLAG00000005493	SEPT14	66	30.847
ENSCLAG00000003230	-	88	40.341	ENSCLAG00000015333	-	96	40.678
ENSCLAG00000003230	-	87	42.330	ENSCLAG00000012112	SEPT4	97	45.246
ENSCLAG00000003230	-	80	41.883	ENSCLAG00000009369	-	74	41.590
ENSCLAG00000003230	-	85	37.283	ENSCLAG00000010486	SEPT1	94	37.283
ENSCLAG00000003230	-	84	30.938	ENSCLAG00000016684	SEPT9	59	40.541
ENSCLAG00000003230	-	98	55.623	ENSCLAG00000007700	-	100	55.319
ENSCLAG00000003230	-	98	72.452	ENSCLAG00000002255	-	100	72.176
ENSCLAG00000003230	-	91	30.636	ENSCLAG00000013502	SEPT8	63	31.731
ENSCLAG00000003230	-	80	30.032	ENSCLAG00000011397	SEPT12	86	30.032
ENSCLAG00000003230	-	74	30.000	ENSCLAG00000006114	SEPT11	67	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003230	-	91	62.079	ENSAPOG00000001837	sept2	94	61.714	Acanthochromis_polyacanthus
ENSCLAG00000003230	-	89	71.343	ENSAMEG00000016539	SEPT2	100	70.556	Ailuropoda_melanoleuca
ENSCLAG00000003230	-	83	64.127	ENSACIG00000021718	sept2	92	64.127	Amphilophus_citrinellus
ENSCLAG00000003230	-	91	64.723	ENSAOCG00000000954	sept2	94	64.392	Amphiprion_ocellaris
ENSCLAG00000003230	-	91	62.647	ENSAPEG00000013904	sept2	94	61.714	Amphiprion_percula
ENSCLAG00000003230	-	97	63.260	ENSATEG00000019489	sept2	94	64.688	Anabas_testudineus
ENSCLAG00000003230	-	97	67.033	ENSACAG00000001408	SEPT2	99	67.308	Anolis_carolinensis
ENSCLAG00000003230	-	90	71.598	ENSANAG00000023789	SEPT2	100	69.169	Aotus_nancymaae
ENSCLAG00000003230	-	97	61.560	ENSACLG00000009428	sept2	94	62.874	Astatotilapia_calliptera
ENSCLAG00000003230	-	96	63.305	ENSAMXG00000039525	sept2	94	64.392	Astyanax_mexicanus
ENSCLAG00000003230	-	98	69.972	ENSBTAG00000002608	SEPT2	100	69.697	Bos_taurus
ENSCLAG00000003230	-	98	71.625	ENSCJAG00000006122	-	100	69.169	Callithrix_jacchus
ENSCLAG00000003230	-	95	70.986	ENSCAFG00000012960	SEPT2	100	70.704	Canis_familiaris
ENSCLAG00000003230	-	97	70.718	ENSCAFG00020025094	-	99	70.442	Canis_lupus_dingo
ENSCLAG00000003230	-	90	71.006	ENSCHIG00000026614	SEPT2	100	69.972	Capra_hircus
ENSCLAG00000003230	-	98	72.176	ENSTSYG00000003579	-	100	71.901	Carlito_syrichta
ENSCLAG00000003230	-	98	69.970	ENSCPOG00000034399	-	100	69.970	Cavia_porcellus
ENSCLAG00000003230	-	98	72.176	ENSCPOG00000013687	-	100	71.901	Cavia_porcellus
ENSCLAG00000003230	-	75	71.530	ENSCCAG00000031252	SEPT2	100	63.277	Cebus_capucinus
ENSCLAG00000003230	-	98	71.350	ENSCATG00000033533	SEPT2	100	71.625	Cercocebus_atys
ENSCLAG00000003230	-	98	71.350	ENSCSAG00000005773	SEPT2	100	71.625	Chlorocebus_sabaeus
ENSCLAG00000003230	-	90	69.452	ENSCHOG00000008715	SEPT2	100	68.817	Choloepus_hoffmanni
ENSCLAG00000003230	-	98	67.308	ENSCPBG00000002410	SEPT2	100	67.033	Chrysemys_picta_bellii
ENSCLAG00000003230	-	85	55.864	ENSCSAVG00000003688	-	93	59.636	Ciona_savignyi
ENSCLAG00000003230	-	98	71.350	ENSCANG00000034470	SEPT2	98	70.440	Colobus_angolensis_palliatus
ENSCLAG00000003230	-	98	71.074	ENSCGRG00001009996	-	100	70.799	Cricetulus_griseus_chok1gshd
ENSCLAG00000003230	-	96	70.506	ENSCGRG00000014494	-	100	70.225	Cricetulus_griseus_crigri
ENSCLAG00000003230	-	89	60.661	ENSCSEG00000017561	sept2	95	61.587	Cynoglossus_semilaevis
ENSCLAG00000003230	-	75	63.415	ENSCVAG00000008351	sept2	88	63.415	Cyprinodon_variegatus
ENSCLAG00000003230	-	91	65.497	ENSDARG00000027590	sept2	95	62.464	Danio_rerio
ENSCLAG00000003230	-	90	71.302	ENSDNOG00000013772	SEPT2	100	70.523	Dasypus_novemcinctus
ENSCLAG00000003230	-	98	71.901	ENSDORG00000000106	-	100	71.625	Dipodomys_ordii
ENSCLAG00000003230	-	84	84.956	ENSETEG00000001868	-	76	84.956	Echinops_telfairi
ENSCLAG00000003230	-	86	43.695	ENSEBUG00000009786	-	96	43.284	Eptatretus_burgeri
ENSCLAG00000003230	-	84	57.658	ENSEBUG00000006082	sept2	72	57.612	Eptatretus_burgeri
ENSCLAG00000003230	-	98	71.901	ENSEASG00005008254	SEPT2	100	71.625	Equus_asinus_asinus
ENSCLAG00000003230	-	98	71.901	ENSECAG00000017553	SEPT2	100	71.625	Equus_caballus
ENSCLAG00000003230	-	94	61.157	ENSELUG00000018507	sept2	95	62.275	Esox_lucius
ENSCLAG00000003230	-	90	71.006	ENSFCAG00000002797	SEPT2	98	70.523	Felis_catus
ENSCLAG00000003230	-	98	68.407	ENSFALG00000003429	SEPT2	100	68.132	Ficedula_albicollis
ENSCLAG00000003230	-	98	72.452	ENSFDAG00000005819	SEPT2	100	72.176	Fukomys_damarensis
ENSCLAG00000003230	-	95	60.452	ENSFHEG00000017419	sept2	95	60.947	Fundulus_heteroclitus
ENSCLAG00000003230	-	96	63.128	ENSGMOG00000017631	sept2	86	65.075	Gadus_morhua
ENSCLAG00000003230	-	98	68.956	ENSGALG00000005809	SEPT2	100	68.681	Gallus_gallus
ENSCLAG00000003230	-	95	60.929	ENSGAFG00000018172	sept2	95	61.976	Gambusia_affinis
ENSCLAG00000003230	-	96	63.128	ENSGACG00000015721	sept2	91	65.950	Gasterosteus_aculeatus
ENSCLAG00000003230	-	98	68.132	ENSGAGG00000004594	SEPT2	100	67.857	Gopherus_agassizii
ENSCLAG00000003230	-	98	71.350	ENSGGOG00000004597	SEPT2	100	71.625	Gorilla_gorilla
ENSCLAG00000003230	-	97	61.067	ENSHBUG00000007012	sept2	94	62.286	Haplochromis_burtoni
ENSCLAG00000003230	-	98	68.639	ENSHGLG00000014923	-	100	68.343	Heterocephalus_glaber_female
ENSCLAG00000003230	-	98	72.452	ENSHGLG00000005291	SEPT2	100	72.176	Heterocephalus_glaber_female
ENSCLAG00000003230	-	98	72.452	ENSHGLG00100018899	SEPT2	100	72.176	Heterocephalus_glaber_male
ENSCLAG00000003230	-	98	68.639	ENSHGLG00100001715	-	100	68.343	Heterocephalus_glaber_male
ENSCLAG00000003230	-	96	63.889	ENSIPUG00000017270	sept2	98	63.889	Ictalurus_punctatus
ENSCLAG00000003230	-	97	71.944	ENSSTOG00000013357	SEPT2	100	71.667	Ictidomys_tridecemlineatus
ENSCLAG00000003230	-	98	71.625	ENSJJAG00000019868	-	100	71.350	Jaculus_jaculus
ENSCLAG00000003230	-	95	63.380	ENSKMAG00000002786	sept2	95	64.392	Kryptolebias_marmoratus
ENSCLAG00000003230	-	96	60.753	ENSLBEG00000007372	sept2	94	62.025	Labrus_bergylta
ENSCLAG00000003230	-	91	60.548	ENSLOCG00000006303	sept2	97	60.167	Lepisosteus_oculatus
ENSCLAG00000003230	-	98	69.697	ENSLAFG00000030960	-	100	69.421	Loxodonta_africana
ENSCLAG00000003230	-	90	71.598	ENSLAFG00000011964	-	100	70.799	Loxodonta_africana
ENSCLAG00000003230	-	98	71.350	ENSMFAG00000039700	SEPT2	100	71.625	Macaca_fascicularis
ENSCLAG00000003230	-	98	71.350	ENSMMUG00000004736	SEPT2	93	81.618	Macaca_mulatta
ENSCLAG00000003230	-	98	71.350	ENSMNEG00000004313	SEPT2	100	71.625	Macaca_nemestrina
ENSCLAG00000003230	-	98	71.350	ENSMLEG00000043469	SEPT2	100	71.625	Mandrillus_leucophaeus
ENSCLAG00000003230	-	95	63.739	ENSMAMG00000004271	sept2	95	64.907	Mastacembelus_armatus
ENSCLAG00000003230	-	97	63.260	ENSMZEG00005005022	sept2	94	64.688	Maylandia_zebra
ENSCLAG00000003230	-	97	68.508	ENSMGAG00000003759	SEPT2	99	68.232	Meleagris_gallopavo
ENSCLAG00000003230	-	97	71.111	ENSMAUG00000011950	-	100	70.833	Mesocricetus_auratus
ENSCLAG00000003230	-	98	71.901	ENSMICG00000000909	SEPT2	100	71.625	Microcebus_murinus
ENSCLAG00000003230	-	98	71.625	ENSMOCG00000014906	-	100	71.350	Microtus_ochrogaster
ENSCLAG00000003230	-	95	61.582	ENSMMOG00000018068	sept2	95	62.130	Mola_mola
ENSCLAG00000003230	-	97	68.508	ENSMODG00000016041	SEPT2	99	68.232	Monodelphis_domestica
ENSCLAG00000003230	-	95	63.739	ENSMALG00000002736	sept2	94	64.392	Monopterus_albus
ENSCLAG00000003230	-	98	71.625	MGP_CAROLIEiJ_G0014457	-	100	85.833	Mus_caroli
ENSCLAG00000003230	-	98	71.350	ENSMUSG00000116048	Sept2	100	71.074	Mus_musculus
ENSCLAG00000003230	-	98	71.350	ENSMUSG00000026276	Sept2	100	85.833	Mus_musculus
ENSCLAG00000003230	-	98	71.625	MGP_PahariEiJ_G0027693	-	100	85.833	Mus_pahari
ENSCLAG00000003230	-	98	71.350	MGP_SPRETEiJ_G0015261	-	100	85.833	Mus_spretus
ENSCLAG00000003230	-	90	71.893	ENSMPUG00000000166	SEPT2	100	71.350	Mustela_putorius_furo
ENSCLAG00000003230	-	97	70.556	ENSMLUG00000007108	SEPT2	100	70.278	Myotis_lucifugus
ENSCLAG00000003230	-	98	71.350	ENSNGAG00000022412	-	100	71.074	Nannospalax_galili
ENSCLAG00000003230	-	97	63.260	ENSNBRG00000003359	sept2	94	64.688	Neolamprologus_brichardi
ENSCLAG00000003230	-	98	71.350	ENSNLEG00000013873	SEPT2	100	71.625	Nomascus_leucogenys
ENSCLAG00000003230	-	74	65.480	ENSMEUG00000007833	-	99	65.480	Notamacropus_eugenii
ENSCLAG00000003230	-	82	63.312	ENSMEUG00000016519	-	93	63.140	Notamacropus_eugenii
ENSCLAG00000003230	-	98	69.272	ENSOPRG00000013796	SEPT2	100	69.003	Ochotona_princeps
ENSCLAG00000003230	-	85	70.440	ENSODEG00000018677	-	98	70.126	Octodon_degus
ENSCLAG00000003230	-	98	72.176	ENSODEG00000010316	-	100	71.901	Octodon_degus
ENSCLAG00000003230	-	98	72.176	ENSODEG00000019855	-	100	72.176	Octodon_degus
ENSCLAG00000003230	-	97	63.260	ENSONIG00000010605	sept2	94	64.688	Oreochromis_niloticus
ENSCLAG00000003230	-	98	69.697	ENSOANG00000011758	-	100	69.421	Ornithorhynchus_anatinus
ENSCLAG00000003230	-	98	70.799	ENSOCUG00000015500	SEPT2	100	70.523	Oryctolagus_cuniculus
ENSCLAG00000003230	-	86	64.526	ENSORLG00000004835	sept2	96	64.486	Oryzias_latipes
ENSCLAG00000003230	-	91	61.798	ENSORLG00020003263	sept2	96	61.714	Oryzias_latipes_hni
ENSCLAG00000003230	-	91	61.798	ENSORLG00015006412	sept2	96	61.714	Oryzias_latipes_hsok
ENSCLAG00000003230	-	91	64.723	ENSOMEG00000008923	sept2	95	64.392	Oryzias_melastigma
ENSCLAG00000003230	-	98	70.799	ENSOGAG00000004457	SEPT2	100	71.074	Otolemur_garnettii
ENSCLAG00000003230	-	90	70.060	ENSOARG00000017810	-	99	68.802	Ovis_aries
ENSCLAG00000003230	-	98	71.350	ENSPPAG00000034127	SEPT2	100	71.625	Pan_paniscus
ENSCLAG00000003230	-	90	71.006	ENSPPRG00000012154	SEPT2	100	70.248	Panthera_pardus
ENSCLAG00000003230	-	90	71.006	ENSPTIG00000004202	SEPT2	100	70.248	Panthera_tigris_altaica
ENSCLAG00000003230	-	98	71.350	ENSPTRG00000023481	SEPT2	100	69.705	Pan_troglodytes
ENSCLAG00000003230	-	98	71.350	ENSPANG00000007917	SEPT2	100	71.625	Papio_anubis
ENSCLAG00000003230	-	95	60.763	ENSPKIG00000002533	sept2	94	61.429	Paramormyrops_kingsleyae
ENSCLAG00000003230	-	98	67.857	ENSPSIG00000009642	SEPT2	100	67.582	Pelodiscus_sinensis
ENSCLAG00000003230	-	95	63.662	ENSPMGG00000012338	sept2	89	64.307	Periophthalmus_magnuspinnatus
ENSCLAG00000003230	-	98	71.625	ENSPEMG00000022937	-	100	71.350	Peromyscus_maniculatus_bairdii
ENSCLAG00000003230	-	98	69.146	ENSPCIG00000005866	SEPT2	99	69.909	Phascolarctos_cinereus
ENSCLAG00000003230	-	95	63.456	ENSPFOG00000017007	sept2	94	64.095	Poecilia_formosa
ENSCLAG00000003230	-	95	60.929	ENSPLAG00000003540	sept2	94	61.429	Poecilia_latipinna
ENSCLAG00000003230	-	95	60.929	ENSPMEG00000003785	sept2	94	61.429	Poecilia_mexicana
ENSCLAG00000003230	-	95	60.870	ENSPREG00000007538	sept2	95	61.321	Poecilia_reticulata
ENSCLAG00000003230	-	98	71.074	ENSPPYG00000013353	SEPT2	100	71.350	Pongo_abelii
ENSCLAG00000003230	-	85	69.401	ENSPCAG00000003337	SEPT2	99	69.085	Procavia_capensis
ENSCLAG00000003230	-	90	69.741	ENSPVAG00000000558	SEPT2	100	69.086	Pteropus_vampyrus
ENSCLAG00000003230	-	97	63.260	ENSPNYG00000000783	sept2	94	64.688	Pundamilia_nyererei
ENSCLAG00000003230	-	97	62.707	ENSPNAG00000010720	sept2	94	64.095	Pygocentrus_nattereri
ENSCLAG00000003230	-	98	70.799	ENSRNOG00000017952	Sept2	100	70.523	Rattus_norvegicus
ENSCLAG00000003230	-	98	71.350	ENSRBIG00000032420	SEPT2	91	71.350	Rhinopithecus_bieti
ENSCLAG00000003230	-	98	71.350	ENSRROG00000031700	SEPT2	100	71.350	Rhinopithecus_roxellana
ENSCLAG00000003230	-	98	71.625	ENSSBOG00000016731	SEPT2	100	71.350	Saimiri_boliviensis_boliviensis
ENSCLAG00000003230	-	98	69.146	ENSSHAG00000012877	SEPT2	100	68.871	Sarcophilus_harrisii
ENSCLAG00000003230	-	95	61.308	ENSSFOG00015018742	sept2	94	62.000	Scleropages_formosus
ENSCLAG00000003230	-	95	63.380	ENSSMAG00000007297	sept2	95	64.392	Scophthalmus_maximus
ENSCLAG00000003230	-	95	63.099	ENSSDUG00000011223	sept2	94	64.392	Seriola_dumerili
ENSCLAG00000003230	-	95	63.099	ENSSLDG00000016125	sept2	94	64.392	Seriola_lalandi_dorsalis
ENSCLAG00000003230	-	83	85.455	ENSSARG00000012133	-	76	85.455	Sorex_araneus
ENSCLAG00000003230	-	91	64.723	ENSSPAG00000001557	sept2	94	64.392	Stegastes_partitus
ENSCLAG00000003230	-	98	69.972	ENSSSCG00000016370	SEPT2	100	69.697	Sus_scrofa
ENSCLAG00000003230	-	98	68.956	ENSTGUG00000006160	SEPT2	100	68.681	Taeniopygia_guttata
ENSCLAG00000003230	-	95	64.124	ENSTRUG00000021827	sept2	94	64.985	Takifugu_rubripes
ENSCLAG00000003230	-	95	64.023	ENSTNIG00000007849	sept2	94	64.688	Tetraodon_nigroviridis
ENSCLAG00000003230	-	90	71.386	ENSUAMG00000017781	SEPT2	100	70.604	Ursus_americanus
ENSCLAG00000003230	-	90	71.598	ENSUMAG00000010525	SEPT2	100	70.799	Ursus_maritimus
ENSCLAG00000003230	-	98	71.074	ENSVVUG00000022793	-	100	70.799	Vulpes_vulpes
ENSCLAG00000003230	-	95	64.507	ENSXETG00000012166	sept2	95	64.897	Xenopus_tropicalis
ENSCLAG00000003230	-	95	58.610	ENSXCOG00000007338	sept2	94	59.048	Xiphophorus_couchianus
ENSCLAG00000003230	-	95	63.456	ENSXMAG00000004256	sept2	94	64.095	Xiphophorus_maculatus