EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000003235 (Gene tree)
Gene ID: 102009263
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 9791 bases
Position: chrJH721925.1:8540459-8550249
Accession: 102009263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000004548	Ribonuc_P_40	PF08584.11	7.6e-94	1	1
ENSCLAP00000004549	Ribonuc_P_40	PF08584.11	8.1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000004633	RPP40-201	1716	XM_005398880	ENSCLAP00000004548	363 (aa)	XP_005398937	UPI00038ECE48
ENSCLAT00000004634	RPP40-202	1023	-	ENSCLAP00000004549	340 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000003235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003235	RPP40	100	84.573	ENSG00000124787	RPP40	100	85.149	Homo_sapiens
ENSCLAG00000003235	RPP40	88	32.776	ENSAPOG00000008660	rpp40	92	32.776	Acanthochromis_polyacanthus
ENSCLAG00000003235	RPP40	100	86.226	ENSAMEG00000012938	RPP40	100	86.226	Ailuropoda_melanoleuca
ENSCLAG00000003235	RPP40	98	37.255	ENSACIG00000003617	rpp40	98	37.255	Amphilophus_citrinellus
ENSCLAG00000003235	RPP40	98	38.375	ENSAOCG00000011846	rpp40	99	38.375	Amphiprion_ocellaris
ENSCLAG00000003235	RPP40	98	38.375	ENSAPEG00000001322	rpp40	99	38.375	Amphiprion_percula
ENSCLAG00000003235	RPP40	98	38.997	ENSATEG00000006584	rpp40	99	38.997	Anabas_testudineus
ENSCLAG00000003235	RPP40	83	70.199	ENSAPLG00000005691	RPP40	99	70.199	Anas_platyrhynchos
ENSCLAG00000003235	RPP40	99	64.624	ENSACAG00000006550	RPP40	88	64.624	Anolis_carolinensis
ENSCLAG00000003235	RPP40	100	82.645	ENSANAG00000029246	RPP40	100	82.645	Aotus_nancymaae
ENSCLAG00000003235	RPP40	97	38.177	ENSACLG00000015883	rpp40	95	38.177	Astatotilapia_calliptera
ENSCLAG00000003235	RPP40	98	47.339	ENSAMXG00000001755	rpp40	99	47.339	Astyanax_mexicanus
ENSCLAG00000003235	RPP40	100	83.471	ENSBTAG00000003332	RPP40	100	83.471	Bos_taurus
ENSCLAG00000003235	RPP40	100	83.196	ENSCJAG00000021373	RPP40	100	83.196	Callithrix_jacchus
ENSCLAG00000003235	RPP40	100	86.501	ENSCAFG00000009435	RPP40	100	86.501	Canis_familiaris
ENSCLAG00000003235	RPP40	100	86.501	ENSCAFG00020013380	RPP40	100	86.501	Canis_lupus_dingo
ENSCLAG00000003235	RPP40	100	83.196	ENSCHIG00000016849	RPP40	100	83.196	Capra_hircus
ENSCLAG00000003235	RPP40	100	85.675	ENSTSYG00000032857	RPP40	100	85.809	Carlito_syrichta
ENSCLAG00000003235	RPP40	90	83.792	ENSCAPG00000004957	RPP40	98	83.792	Cavia_aperea
ENSCLAG00000003235	RPP40	100	91.765	ENSCPOG00000005855	RPP40	100	91.765	Cavia_porcellus
ENSCLAG00000003235	RPP40	100	83.235	ENSCCAG00000019809	RPP40	100	83.235	Cebus_capucinus
ENSCLAG00000003235	RPP40	100	83.471	ENSCATG00000038787	RPP40	100	83.471	Cercocebus_atys
ENSCLAG00000003235	RPP40	100	83.747	ENSCSAG00000007307	RPP40	100	83.747	Chlorocebus_sabaeus
ENSCLAG00000003235	RPP40	74	66.400	ENSCHOG00000005856	-	100	66.400	Choloepus_hoffmanni
ENSCLAG00000003235	RPP40	99	70.833	ENSCPBG00000009003	RPP40	99	70.833	Chrysemys_picta_bellii
ENSCLAG00000003235	RPP40	100	84.022	ENSCANG00000033965	RPP40	100	84.022	Colobus_angolensis_palliatus
ENSCLAG00000003235	RPP40	100	79.614	ENSCGRG00001018328	Rpp40	100	79.614	Cricetulus_griseus_chok1gshd
ENSCLAG00000003235	RPP40	100	79.614	ENSCGRG00000011344	Rpp40	100	79.614	Cricetulus_griseus_crigri
ENSCLAG00000003235	RPP40	98	36.517	ENSCSEG00000015006	-	98	36.517	Cynoglossus_semilaevis
ENSCLAG00000003235	RPP40	74	35.055	ENSCVAG00000012169	rpp40	100	35.055	Cyprinodon_variegatus
ENSCLAG00000003235	RPP40	98	50.000	ENSDARG00000017605	rpp40	99	50.000	Danio_rerio
ENSCLAG00000003235	RPP40	82	78.788	ENSDNOG00000048136	RPP40	99	78.788	Dasypus_novemcinctus
ENSCLAG00000003235	RPP40	100	81.543	ENSDORG00000029944	-	100	81.543	Dipodomys_ordii
ENSCLAG00000003235	RPP40	100	61.473	ENSDORG00000011196	-	100	61.473	Dipodomys_ordii
ENSCLAG00000003235	RPP40	100	65.565	ENSETEG00000007458	RPP40	100	65.565	Echinops_telfairi
ENSCLAG00000003235	RPP40	98	43.944	ENSEBUG00000000386	rpp40	99	43.944	Eptatretus_burgeri
ENSCLAG00000003235	RPP40	100	86.501	ENSEASG00005012116	RPP40	80	86.501	Equus_asinus_asinus
ENSCLAG00000003235	RPP40	100	86.226	ENSECAG00000017247	RPP40	80	86.226	Equus_caballus
ENSCLAG00000003235	RPP40	68	82.927	ENSEEUG00000012087	RPP40	100	63.636	Erinaceus_europaeus
ENSCLAG00000003235	RPP40	99	48.747	ENSELUG00000017004	rpp40	99	48.747	Esox_lucius
ENSCLAG00000003235	RPP40	100	87.353	ENSFCAG00000009249	RPP40	100	87.353	Felis_catus
ENSCLAG00000003235	RPP40	85	67.081	ENSFALG00000013166	RPP40	98	67.081	Ficedula_albicollis
ENSCLAG00000003235	RPP40	100	91.460	ENSFDAG00000013001	-	100	91.460	Fukomys_damarensis
ENSCLAG00000003235	RPP40	81	73.220	ENSFDAG00000000265	-	100	73.220	Fukomys_damarensis
ENSCLAG00000003235	RPP40	98	40.896	ENSFHEG00000021429	rpp40	88	40.896	Fundulus_heteroclitus
ENSCLAG00000003235	RPP40	89	39.130	ENSGMOG00000018653	rpp40	100	39.130	Gadus_morhua
ENSCLAG00000003235	RPP40	99	66.667	ENSGALG00000036074	RPP40	99	66.667	Gallus_gallus
ENSCLAG00000003235	RPP40	82	34.899	ENSGAFG00000004189	-	98	34.899	Gambusia_affinis
ENSCLAG00000003235	RPP40	98	39.216	ENSGACG00000002472	rpp40	99	39.216	Gasterosteus_aculeatus
ENSCLAG00000003235	RPP40	99	70.556	ENSGAGG00000012918	RPP40	99	70.556	Gopherus_agassizii
ENSCLAG00000003235	RPP40	100	84.022	ENSGGOG00000013764	RPP40	100	84.022	Gorilla_gorilla
ENSCLAG00000003235	RPP40	90	37.273	ENSHBUG00000009378	rpp40	93	37.273	Haplochromis_burtoni
ENSCLAG00000003235	RPP40	100	90.909	ENSHGLG00000004871	RPP40	100	90.909	Heterocephalus_glaber_female
ENSCLAG00000003235	RPP40	100	91.185	ENSHGLG00100002080	RPP40	100	91.185	Heterocephalus_glaber_male
ENSCLAG00000003235	RPP40	97	32.295	ENSHCOG00000013264	-	94	32.295	Hippocampus_comes
ENSCLAG00000003235	RPP40	99	46.389	ENSIPUG00000008951	RPP40	99	46.389	Ictalurus_punctatus
ENSCLAG00000003235	RPP40	100	84.573	ENSSTOG00000011199	RPP40	100	84.573	Ictidomys_tridecemlineatus
ENSCLAG00000003235	RPP40	100	80.882	ENSJJAG00000020629	Rpp40	100	80.882	Jaculus_jaculus
ENSCLAG00000003235	RPP40	98	37.815	ENSKMAG00000019358	rpp40	99	37.815	Kryptolebias_marmoratus
ENSCLAG00000003235	RPP40	98	39.496	ENSLBEG00000022724	rpp40	99	39.496	Labrus_bergylta
ENSCLAG00000003235	RPP40	99	59.722	ENSLACG00000014848	RPP40	99	59.722	Latimeria_chalumnae
ENSCLAG00000003235	RPP40	100	53.168	ENSLOCG00000011650	rpp40	100	53.168	Lepisosteus_oculatus
ENSCLAG00000003235	RPP40	83	83.168	ENSLAFG00000007530	RPP40	100	83.168	Loxodonta_africana
ENSCLAG00000003235	RPP40	100	83.471	ENSMFAG00000043100	RPP40	100	83.471	Macaca_fascicularis
ENSCLAG00000003235	RPP40	100	83.196	ENSMMUG00000004966	RPP40	100	83.196	Macaca_mulatta
ENSCLAG00000003235	RPP40	100	84.022	ENSMNEG00000041986	RPP40	100	84.488	Macaca_nemestrina
ENSCLAG00000003235	RPP40	98	74.925	ENSMLEG00000040851	RPP40	100	81.818	Mandrillus_leucophaeus
ENSCLAG00000003235	RPP40	98	39.496	ENSMAMG00000019551	rpp40	98	39.496	Mastacembelus_armatus
ENSCLAG00000003235	RPP40	98	38.655	ENSMZEG00005019475	rpp40	99	38.655	Maylandia_zebra
ENSCLAG00000003235	RPP40	89	67.702	ENSMGAG00000004009	RPP40	89	67.702	Meleagris_gallopavo
ENSCLAG00000003235	RPP40	100	82.941	ENSMAUG00000010268	Rpp40	100	82.941	Mesocricetus_auratus
ENSCLAG00000003235	RPP40	100	86.226	ENSMICG00000003297	RPP40	100	86.176	Microcebus_murinus
ENSCLAG00000003235	RPP40	100	82.353	ENSMOCG00000000305	Rpp40	100	82.353	Microtus_ochrogaster
ENSCLAG00000003235	RPP40	98	34.320	ENSMMOG00000020591	-	99	34.320	Mola_mola
ENSCLAG00000003235	RPP40	100	78.297	ENSMODG00000009826	RPP40	100	78.297	Monodelphis_domestica
ENSCLAG00000003235	RPP40	98	38.095	ENSMALG00000020133	rpp40	99	38.095	Monopterus_albus
ENSCLAG00000003235	RPP40	100	82.647	MGP_CAROLIEiJ_G0018429	Rpp40	100	82.647	Mus_caroli
ENSCLAG00000003235	RPP40	100	84.118	ENSMUSG00000021418	Rpp40	100	84.118	Mus_musculus
ENSCLAG00000003235	RPP40	100	82.941	MGP_PahariEiJ_G0019497	Rpp40	100	82.941	Mus_pahari
ENSCLAG00000003235	RPP40	100	83.529	MGP_SPRETEiJ_G0019309	Rpp40	100	83.529	Mus_spretus
ENSCLAG00000003235	RPP40	100	85.950	ENSMPUG00000000530	RPP40	93	85.950	Mustela_putorius_furo
ENSCLAG00000003235	RPP40	100	84.298	ENSMLUG00000000501	RPP40	100	84.298	Myotis_lucifugus
ENSCLAG00000003235	RPP40	95	74.566	ENSNGAG00000022529	-	100	74.566	Nannospalax_galili
ENSCLAG00000003235	RPP40	100	84.573	ENSNGAG00000023955	-	100	84.573	Nannospalax_galili
ENSCLAG00000003235	RPP40	87	36.667	ENSNBRG00000017465	rpp40	86	36.842	Neolamprologus_brichardi
ENSCLAG00000003235	RPP40	100	84.573	ENSNLEG00000034397	RPP40	100	84.573	Nomascus_leucogenys
ENSCLAG00000003235	RPP40	100	73.554	ENSMEUG00000005300	RPP40	100	73.554	Notamacropus_eugenii
ENSCLAG00000003235	RPP40	100	84.848	ENSODEG00000018153	-	100	84.848	Octodon_degus
ENSCLAG00000003235	RPP40	88	88.963	ENSODEG00000006170	-	100	88.963	Octodon_degus
ENSCLAG00000003235	RPP40	100	89.532	ENSODEG00000007255	-	100	89.532	Octodon_degus
ENSCLAG00000003235	RPP40	98	38.655	ENSONIG00000014016	rpp40	98	38.655	Oreochromis_niloticus
ENSCLAG00000003235	RPP40	83	72.277	ENSOANG00000001200	RPP40	99	72.277	Ornithorhynchus_anatinus
ENSCLAG00000003235	RPP40	99	75.346	ENSOCUG00000000354	RPP40	99	75.346	Oryctolagus_cuniculus
ENSCLAG00000003235	RPP40	99	37.500	ENSORLG00000008242	-	100	37.500	Oryzias_latipes
ENSCLAG00000003235	RPP40	99	37.500	ENSORLG00020013745	-	91	37.500	Oryzias_latipes_hni
ENSCLAG00000003235	RPP40	99	37.778	ENSORLG00015000887	-	100	37.778	Oryzias_latipes_hsok
ENSCLAG00000003235	RPP40	99	39.612	ENSOMEG00000002747	rpp40	100	39.612	Oryzias_melastigma
ENSCLAG00000003235	RPP40	100	85.675	ENSOGAG00000006055	RPP40	100	85.675	Otolemur_garnettii
ENSCLAG00000003235	RPP40	91	80.180	ENSOARG00000018783	RPP40	100	82.838	Ovis_aries
ENSCLAG00000003235	RPP40	100	83.747	ENSPPAG00000023703	RPP40	100	83.747	Pan_paniscus
ENSCLAG00000003235	RPP40	100	87.059	ENSPPRG00000005612	RPP40	100	87.059	Panthera_pardus
ENSCLAG00000003235	RPP40	100	80.716	ENSPTIG00000018847	RPP40	100	80.716	Panthera_tigris_altaica
ENSCLAG00000003235	RPP40	100	84.298	ENSPTRG00000017690	RPP40	100	84.298	Pan_troglodytes
ENSCLAG00000003235	RPP40	100	84.022	ENSPANG00000017865	RPP40	100	84.022	Papio_anubis
ENSCLAG00000003235	RPP40	98	49.441	ENSPKIG00000006311	rpp40	99	49.441	Paramormyrops_kingsleyae
ENSCLAG00000003235	RPP40	65	70.721	ENSPSIG00000007854	RPP40	100	70.721	Pelodiscus_sinensis
ENSCLAG00000003235	RPP40	92	79.299	ENSPEMG00000020809	Rpp40	91	79.299	Peromyscus_maniculatus_bairdii
ENSCLAG00000003235	RPP40	75	47.810	ENSPMAG00000008412	rpp40	99	47.810	Petromyzon_marinus
ENSCLAG00000003235	RPP40	100	80.165	ENSPCIG00000010682	RPP40	100	80.165	Phascolarctos_cinereus
ENSCLAG00000003235	RPP40	98	36.769	ENSPFOG00000011460	rpp40	98	36.769	Poecilia_formosa
ENSCLAG00000003235	RPP40	98	37.255	ENSPLAG00000001334	rpp40	99	37.255	Poecilia_latipinna
ENSCLAG00000003235	RPP40	98	36.975	ENSPMEG00000007721	rpp40	99	36.975	Poecilia_mexicana
ENSCLAG00000003235	RPP40	98	37.535	ENSPREG00000009215	rpp40	99	37.535	Poecilia_reticulata
ENSCLAG00000003235	RPP40	100	84.298	ENSPPYG00000016194	RPP40	100	84.298	Pongo_abelii
ENSCLAG00000003235	RPP40	51	82.609	ENSPCAG00000002700	-	99	82.609	Procavia_capensis
ENSCLAG00000003235	RPP40	100	87.059	ENSPCOG00000003907	RPP40	100	87.059	Propithecus_coquereli
ENSCLAG00000003235	RPP40	100	85.950	ENSPVAG00000011325	RPP40	100	85.950	Pteropus_vampyrus
ENSCLAG00000003235	RPP40	82	38.255	ENSPNYG00000004432	rpp40	98	38.255	Pundamilia_nyererei
ENSCLAG00000003235	RPP40	98	47.765	ENSPNAG00000019125	rpp40	99	47.765	Pygocentrus_nattereri
ENSCLAG00000003235	RPP40	100	83.196	ENSRNOG00000016226	Rpp40	100	83.196	Rattus_norvegicus
ENSCLAG00000003235	RPP40	100	84.298	ENSRBIG00000035800	RPP40	100	84.818	Rhinopithecus_bieti
ENSCLAG00000003235	RPP40	100	84.298	ENSRROG00000039116	RPP40	100	84.298	Rhinopithecus_roxellana
ENSCLAG00000003235	RPP40	100	82.920	ENSSBOG00000020297	RPP40	100	82.920	Saimiri_boliviensis_boliviensis
ENSCLAG00000003235	RPP40	77	77.338	ENSSHAG00000002102	RPP40	100	77.338	Sarcophilus_harrisii
ENSCLAG00000003235	RPP40	99	48.760	ENSSFOG00015001142	rpp40	81	48.760	Scleropages_formosus
ENSCLAG00000003235	RPP40	98	38.095	ENSSDUG00000007202	rpp40	99	38.095	Seriola_dumerili
ENSCLAG00000003235	RPP40	98	37.815	ENSSLDG00000017563	rpp40	99	37.815	Seriola_lalandi_dorsalis
ENSCLAG00000003235	RPP40	99	68.333	ENSSPUG00000017487	-	99	68.333	Sphenodon_punctatus
ENSCLAG00000003235	RPP40	81	68.136	ENSSPUG00000018950	-	100	68.136	Sphenodon_punctatus
ENSCLAG00000003235	RPP40	98	39.496	ENSSPAG00000022716	rpp40	99	39.496	Stegastes_partitus
ENSCLAG00000003235	RPP40	100	81.267	ENSSSCG00000000998	RPP40	100	81.267	Sus_scrofa
ENSCLAG00000003235	RPP40	52	70.056	ENSTGUG00000015246	-	100	70.056	Taeniopygia_guttata
ENSCLAG00000003235	RPP40	98	66.387	ENSTGUG00000002258	-	99	66.387	Taeniopygia_guttata
ENSCLAG00000003235	RPP40	97	38.810	ENSTRUG00000003755	rpp40	98	38.810	Takifugu_rubripes
ENSCLAG00000003235	RPP40	98	37.183	ENSTNIG00000003077	rpp40	98	37.183	Tetraodon_nigroviridis
ENSCLAG00000003235	RPP40	74	60.400	ENSTBEG00000014467	-	73	60.400	Tupaia_belangeri
ENSCLAG00000003235	RPP40	99	77.624	ENSTTRG00000007319	RPP40	100	77.624	Tursiops_truncatus
ENSCLAG00000003235	RPP40	100	86.501	ENSUAMG00000002159	RPP40	100	86.501	Ursus_americanus
ENSCLAG00000003235	RPP40	100	86.501	ENSUMAG00000018639	RPP40	94	86.501	Ursus_maritimus
ENSCLAG00000003235	RPP40	80	61.433	ENSVPAG00000004652	-	99	61.433	Vicugna_pacos
ENSCLAG00000003235	RPP40	100	86.226	ENSVVUG00000005451	RPP40	100	86.226	Vulpes_vulpes
ENSCLAG00000003235	RPP40	99	53.699	ENSXETG00000017617	rpp40	100	53.699	Xenopus_tropicalis
ENSCLAG00000003235	RPP40	57	40.458	ENSXCOG00000019991	-	87	30.172	Xiphophorus_couchianus
ENSCLAG00000003235	RPP40	98	32.081	ENSXMAG00000024940	rpp40	98	32.081	Xiphophorus_maculatus