EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000003338 (Gene tree)
Gene ID: 102003266
Gene Symbol: PRPF19
Alias: NMP200|PRP19|PSO4|SNEV|UBOX4|hPSO4
Full Name: pre-mRNA processing factor 19
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 11804 bases
Position: chrJH721971.1:5545989-5557792
Accession: 102003266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000004692	Prp19	PF08606.11	4.9e-33	1	1
ENSCLAP00000004693	Prp19	PF08606.11	5e-33	1	1
ENSCLAP00000004691	Prp19	PF08606.11	5.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000004777	PRPF19-201	1993	-	ENSCLAP00000004691	510 (aa)	-	-
ENSCLAT00000004778	PRPF19-202	2192	XM_005408116	ENSCLAP00000004692	497 (aa)	XP_005408173	-
ENSCLAT00000004779	PRPF19-203	1515	-	ENSCLAP00000004693	504 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000003338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000003338	PRPF19	58	35.200	ENSCLAG00000013342	TBL3	65	35.200
ENSCLAG00000003338	PRPF19	55	34.862	ENSCLAG00000010593	POC1A	80	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003338	PRPF19	100	99.396	ENSG00000110107	PRPF19	100	100.000	Homo_sapiens
ENSCLAG00000003338	PRPF19	100	86.345	ENSAPOG00000017823	prpf19	100	85.776	Acanthochromis_polyacanthus
ENSCLAG00000003338	PRPF19	100	99.184	ENSAMEG00000007375	PRPF19	98	98.982	Ailuropoda_melanoleuca
ENSCLAG00000003338	PRPF19	100	85.714	ENSACIG00000015876	prpf19	98	85.714	Amphilophus_citrinellus
ENSCLAG00000003338	PRPF19	100	86.345	ENSAOCG00000020444	prpf19	99	86.345	Amphiprion_ocellaris
ENSCLAG00000003338	PRPF19	100	86.345	ENSAPEG00000016076	prpf19	99	86.345	Amphiprion_percula
ENSCLAG00000003338	PRPF19	100	86.345	ENSATEG00000008840	prpf19	99	86.345	Anabas_testudineus
ENSCLAG00000003338	PRPF19	100	97.787	ENSACAG00000017797	PRPF19	99	97.787	Anolis_carolinensis
ENSCLAG00000003338	PRPF19	100	98.994	ENSANAG00000021762	PRPF19	99	98.994	Aotus_nancymaae
ENSCLAG00000003338	PRPF19	100	85.542	ENSACLG00000009416	prpf19	100	84.914	Astatotilapia_calliptera
ENSCLAG00000003338	PRPF19	100	86.145	ENSAMXG00000011547	prpf19	99	86.145	Astyanax_mexicanus
ENSCLAG00000003338	PRPF19	100	99.598	ENSBTAG00000014366	PRPF19	99	99.598	Bos_taurus
ENSCLAG00000003338	PRPF19	100	51.703	WBGene00020423	prp-19	99	51.786	Caenorhabditis_elegans
ENSCLAG00000003338	PRPF19	100	99.195	ENSCJAG00000016509	PRPF19	99	99.195	Callithrix_jacchus
ENSCLAG00000003338	PRPF19	100	99.195	ENSCAFG00000016438	PRPF19	98	98.603	Canis_familiaris
ENSCLAG00000003338	PRPF19	100	99.195	ENSCAFG00020012565	PRPF19	99	99.195	Canis_lupus_dingo
ENSCLAG00000003338	PRPF19	100	99.598	ENSCHIG00000018281	PRPF19	99	99.598	Capra_hircus
ENSCLAG00000003338	PRPF19	100	98.793	ENSTSYG00000006860	PRPF19	99	98.793	Carlito_syrichta
ENSCLAG00000003338	PRPF19	100	100.000	ENSCAPG00000016225	PRPF19	100	99.599	Cavia_aperea
ENSCLAG00000003338	PRPF19	100	100.000	ENSCPOG00000020688	PRPF19	99	100.000	Cavia_porcellus
ENSCLAG00000003338	PRPF19	100	99.195	ENSCCAG00000025839	PRPF19	99	99.195	Cebus_capucinus
ENSCLAG00000003338	PRPF19	100	99.396	ENSCATG00000041921	PRPF19	99	99.396	Cercocebus_atys
ENSCLAG00000003338	PRPF19	100	99.396	ENSCSAG00000006254	PRPF19	99	99.396	Chlorocebus_sabaeus
ENSCLAG00000003338	PRPF19	61	87.171	ENSCHOG00000005840	PRPF19	99	86.364	Choloepus_hoffmanni
ENSCLAG00000003338	PRPF19	100	97.419	ENSCPBG00000027061	PRPF19	99	97.384	Chrysemys_picta_bellii
ENSCLAG00000003338	PRPF19	100	68.276	ENSCING00000016625	-	99	68.349	Ciona_intestinalis
ENSCLAG00000003338	PRPF19	100	68.563	ENSCSAVG00000002027	-	99	68.072	Ciona_savignyi
ENSCLAG00000003338	PRPF19	100	98.693	ENSCANG00000027155	PRPF19	99	46.050	Colobus_angolensis_palliatus
ENSCLAG00000003338	PRPF19	100	99.598	ENSCGRG00001002699	Prpf19	99	99.598	Cricetulus_griseus_chok1gshd
ENSCLAG00000003338	PRPF19	100	99.598	ENSCGRG00000008964	Prpf19	99	99.598	Cricetulus_griseus_crigri
ENSCLAG00000003338	PRPF19	100	85.341	ENSCSEG00000010411	prpf19	99	85.341	Cynoglossus_semilaevis
ENSCLAG00000003338	PRPF19	99	84.909	ENSCVAG00000012011	prpf19	99	84.970	Cyprinodon_variegatus
ENSCLAG00000003338	PRPF19	100	85.743	ENSDARG00000015239	prpf19	99	85.743	Danio_rerio
ENSCLAG00000003338	PRPF19	100	99.195	ENSDNOG00000005797	PRPF19	99	99.195	Dasypus_novemcinctus
ENSCLAG00000003338	PRPF19	100	99.598	ENSDORG00000006906	Prpf19	99	99.598	Dipodomys_ordii
ENSCLAG00000003338	PRPF19	100	66.203	FBgn0261119	Prp19	99	66.272	Drosophila_melanogaster
ENSCLAG00000003338	PRPF19	100	86.519	ENSETEG00000012295	PRPF19	99	86.519	Echinops_telfairi
ENSCLAG00000003338	PRPF19	84	77.143	ENSEBUG00000013075	prpf19	100	77.143	Eptatretus_burgeri
ENSCLAG00000003338	PRPF19	100	99.147	ENSEASG00005008056	PRPF19	97	98.520	Equus_asinus_asinus
ENSCLAG00000003338	PRPF19	100	99.396	ENSECAG00000007322	PRPF19	99	99.396	Equus_caballus
ENSCLAG00000003338	PRPF19	100	78.873	ENSELUG00000004578	prpf19	99	78.873	Esox_lucius
ENSCLAG00000003338	PRPF19	100	84.940	ENSELUG00000020276	-	99	84.940	Esox_lucius
ENSCLAG00000003338	PRPF19	100	99.195	ENSFCAG00000013668	PRPF19	99	99.195	Felis_catus
ENSCLAG00000003338	PRPF19	100	97.183	ENSFALG00000012084	PRPF19	99	97.183	Ficedula_albicollis
ENSCLAG00000003338	PRPF19	85	99.763	ENSFDAG00000009420	PRPF19	96	99.763	Fukomys_damarensis
ENSCLAG00000003338	PRPF19	99	85.312	ENSFHEG00000022135	prpf19	99	84.970	Fundulus_heteroclitus
ENSCLAG00000003338	PRPF19	100	86.546	ENSGMOG00000014756	prpf19	99	86.546	Gadus_morhua
ENSCLAG00000003338	PRPF19	100	97.183	ENSGALG00000036530	PRPF19	99	97.183	Gallus_gallus
ENSCLAG00000003338	PRPF19	99	84.708	ENSGAFG00000008931	prpf19	99	84.369	Gambusia_affinis
ENSCLAG00000003338	PRPF19	100	85.341	ENSGACG00000017976	prpf19	99	85.341	Gasterosteus_aculeatus
ENSCLAG00000003338	PRPF19	100	97.586	ENSGAGG00000013328	PRPF19	99	97.586	Gopherus_agassizii
ENSCLAG00000003338	PRPF19	100	99.396	ENSGGOG00000008648	PRPF19	99	99.396	Gorilla_gorilla
ENSCLAG00000003338	PRPF19	100	85.542	ENSHBUG00000008394	prpf19	99	85.542	Haplochromis_burtoni
ENSCLAG00000003338	PRPF19	100	99.598	ENSHGLG00000003934	PRPF19	99	99.598	Heterocephalus_glaber_female
ENSCLAG00000003338	PRPF19	100	80.907	ENSHGLG00100010649	PRPF19	100	80.885	Heterocephalus_glaber_male
ENSCLAG00000003338	PRPF19	100	84.137	ENSHCOG00000016720	prpf19	99	84.137	Hippocampus_comes
ENSCLAG00000003338	PRPF19	100	86.145	ENSIPUG00000013084	prpf19	99	86.145	Ictalurus_punctatus
ENSCLAG00000003338	PRPF19	100	99.195	ENSSTOG00000001598	PRPF19	99	99.195	Ictidomys_tridecemlineatus
ENSCLAG00000003338	PRPF19	100	99.396	ENSJJAG00000020609	Prpf19	99	99.396	Jaculus_jaculus
ENSCLAG00000003338	PRPF19	99	85.714	ENSKMAG00000010257	prpf19	99	85.371	Kryptolebias_marmoratus
ENSCLAG00000003338	PRPF19	100	85.743	ENSLBEG00000027436	prpf19	99	85.743	Labrus_bergylta
ENSCLAG00000003338	PRPF19	100	90.342	ENSLACG00000003434	PRPF19	99	90.342	Latimeria_chalumnae
ENSCLAG00000003338	PRPF19	93	74.414	ENSLOCG00000008123	prpf19	100	74.414	Lepisosteus_oculatus
ENSCLAG00000003338	PRPF19	100	95.720	ENSLAFG00000002644	PRPF19	99	95.720	Loxodonta_africana
ENSCLAG00000003338	PRPF19	100	99.396	ENSMFAG00000036743	PRPF19	99	99.396	Macaca_fascicularis
ENSCLAG00000003338	PRPF19	100	99.396	ENSMMUG00000014530	PRPF19	99	99.396	Macaca_mulatta
ENSCLAG00000003338	PRPF19	100	99.396	ENSMNEG00000044485	PRPF19	99	99.396	Macaca_nemestrina
ENSCLAG00000003338	PRPF19	100	99.396	ENSMLEG00000043312	PRPF19	99	99.396	Mandrillus_leucophaeus
ENSCLAG00000003338	PRPF19	100	85.743	ENSMAMG00000006843	prpf19	100	85.345	Mastacembelus_armatus
ENSCLAG00000003338	PRPF19	100	85.542	ENSMZEG00005013356	prpf19	99	85.542	Maylandia_zebra
ENSCLAG00000003338	PRPF19	99	90.180	ENSMGAG00000003180	PRPF19	100	90.180	Meleagris_gallopavo
ENSCLAG00000003338	PRPF19	100	99.598	ENSMAUG00000012585	Prpf19	99	99.598	Mesocricetus_auratus
ENSCLAG00000003338	PRPF19	100	99.396	ENSMICG00000011236	PRPF19	99	99.396	Microcebus_murinus
ENSCLAG00000003338	PRPF19	100	99.598	ENSMOCG00000010383	Prpf19	99	99.598	Microtus_ochrogaster
ENSCLAG00000003338	PRPF19	100	85.312	ENSMMOG00000003138	prpf19	99	85.312	Mola_mola
ENSCLAG00000003338	PRPF19	100	98.994	ENSMODG00000020338	PRPF19	99	98.994	Monodelphis_domestica
ENSCLAG00000003338	PRPF19	100	77.712	ENSMALG00000010981	prpf19	99	77.407	Monopterus_albus
ENSCLAG00000003338	PRPF19	100	99.598	MGP_CAROLIEiJ_G0022704	Prpf19	99	99.598	Mus_caroli
ENSCLAG00000003338	PRPF19	100	99.598	ENSMUSG00000024735	Prpf19	99	99.598	Mus_musculus
ENSCLAG00000003338	PRPF19	100	99.598	MGP_PahariEiJ_G0014198	Prpf19	99	99.598	Mus_pahari
ENSCLAG00000003338	PRPF19	100	99.598	MGP_SPRETEiJ_G0023618	Prpf19	99	99.598	Mus_spretus
ENSCLAG00000003338	PRPF19	100	99.195	ENSMPUG00000014432	PRPF19	99	99.195	Mustela_putorius_furo
ENSCLAG00000003338	PRPF19	100	94.727	ENSMLUG00000017597	PRPF19	99	94.727	Myotis_lucifugus
ENSCLAG00000003338	PRPF19	100	98.994	ENSNGAG00000012671	Prpf19	99	98.996	Nannospalax_galili
ENSCLAG00000003338	PRPF19	100	85.542	ENSNBRG00000000055	prpf19	99	85.542	Neolamprologus_brichardi
ENSCLAG00000003338	PRPF19	100	99.396	ENSNLEG00000013618	PRPF19	99	99.396	Nomascus_leucogenys
ENSCLAG00000003338	PRPF19	100	95.372	ENSOPRG00000008630	PRPF19	100	95.372	Ochotona_princeps
ENSCLAG00000003338	PRPF19	100	99.396	ENSODEG00000004043	PRPF19	99	99.396	Octodon_degus
ENSCLAG00000003338	PRPF19	100	85.542	ENSONIG00000004880	prpf19	99	85.542	Oreochromis_niloticus
ENSCLAG00000003338	PRPF19	100	95.367	ENSOCUG00000015689	PRPF19	99	95.367	Oryctolagus_cuniculus
ENSCLAG00000003338	PRPF19	99	85.513	ENSORLG00000004666	prpf19	99	85.170	Oryzias_latipes
ENSCLAG00000003338	PRPF19	99	85.513	ENSORLG00020013561	prpf19	99	85.170	Oryzias_latipes_hni
ENSCLAG00000003338	PRPF19	99	85.513	ENSORLG00015022196	prpf19	99	85.170	Oryzias_latipes_hsok
ENSCLAG00000003338	PRPF19	99	84.708	ENSOMEG00000004424	prpf19	99	84.677	Oryzias_melastigma
ENSCLAG00000003338	PRPF19	100	99.195	ENSOGAG00000016756	PRPF19	99	99.195	Otolemur_garnettii
ENSCLAG00000003338	PRPF19	100	99.598	ENSOARG00000015596	PRPF19	99	99.598	Ovis_aries
ENSCLAG00000003338	PRPF19	100	97.614	ENSPPAG00000030246	PRPF19	99	97.619	Pan_paniscus
ENSCLAG00000003338	PRPF19	100	99.195	ENSPPRG00000002470	PRPF19	99	99.195	Panthera_pardus
ENSCLAG00000003338	PRPF19	100	99.195	ENSPTIG00000006541	PRPF19	99	99.195	Panthera_tigris_altaica
ENSCLAG00000003338	PRPF19	100	99.396	ENSPTRG00000003724	PRPF19	99	99.396	Pan_troglodytes
ENSCLAG00000003338	PRPF19	100	99.396	ENSPANG00000002762	PRPF19	99	99.396	Papio_anubis
ENSCLAG00000003338	PRPF19	100	85.341	ENSPKIG00000019715	prpf19	99	85.341	Paramormyrops_kingsleyae
ENSCLAG00000003338	PRPF19	84	97.136	ENSPSIG00000007497	PRPF19	100	97.136	Pelodiscus_sinensis
ENSCLAG00000003338	PRPF19	100	85.312	ENSPMGG00000017527	prpf19	99	85.312	Periophthalmus_magnuspinnatus
ENSCLAG00000003338	PRPF19	100	99.396	ENSPEMG00000019270	Prpf19	99	99.396	Peromyscus_maniculatus_bairdii
ENSCLAG00000003338	PRPF19	100	98.925	ENSPCIG00000003485	PRPF19	79	98.927	Phascolarctos_cinereus
ENSCLAG00000003338	PRPF19	99	84.708	ENSPFOG00000002558	prpf19	99	84.369	Poecilia_formosa
ENSCLAG00000003338	PRPF19	99	84.708	ENSPLAG00000017942	prpf19	99	84.369	Poecilia_latipinna
ENSCLAG00000003338	PRPF19	99	84.708	ENSPMEG00000008638	prpf19	99	84.369	Poecilia_mexicana
ENSCLAG00000003338	PRPF19	99	86.806	ENSPREG00000002489	prpf19	95	86.406	Poecilia_reticulata
ENSCLAG00000003338	PRPF19	100	97.908	ENSPPYG00000003202	PRPF19	92	97.303	Pongo_abelii
ENSCLAG00000003338	PRPF19	100	98.793	ENSPCAG00000001930	PRPF19	99	98.793	Procavia_capensis
ENSCLAG00000003338	PRPF19	100	99.570	ENSPCOG00000014017	PRPF19	99	99.570	Propithecus_coquereli
ENSCLAG00000003338	PRPF19	100	99.396	ENSPVAG00000014669	PRPF19	99	99.396	Pteropus_vampyrus
ENSCLAG00000003338	PRPF19	100	85.542	ENSPNYG00000000859	prpf19	99	85.542	Pundamilia_nyererei
ENSCLAG00000003338	PRPF19	100	86.546	ENSPNAG00000019245	prpf19	99	86.546	Pygocentrus_nattereri
ENSCLAG00000003338	PRPF19	100	99.598	ENSRNOG00000020897	Prpf19	99	99.598	Rattus_norvegicus
ENSCLAG00000003338	PRPF19	100	99.396	ENSRBIG00000036672	PRPF19	99	99.396	Rhinopithecus_bieti
ENSCLAG00000003338	PRPF19	100	99.396	ENSRROG00000041572	PRPF19	99	99.396	Rhinopithecus_roxellana
ENSCLAG00000003338	PRPF19	100	99.195	ENSSBOG00000022840	PRPF19	99	99.195	Saimiri_boliviensis_boliviensis
ENSCLAG00000003338	PRPF19	100	98.994	ENSSHAG00000009462	PRPF19	99	98.994	Sarcophilus_harrisii
ENSCLAG00000003338	PRPF19	100	83.300	ENSSFOG00015001236	prpf19	99	83.300	Scleropages_formosus
ENSCLAG00000003338	PRPF19	100	86.145	ENSSMAG00000002273	prpf19	99	86.145	Scophthalmus_maximus
ENSCLAG00000003338	PRPF19	100	85.944	ENSSDUG00000003299	prpf19	99	85.944	Seriola_dumerili
ENSCLAG00000003338	PRPF19	100	85.944	ENSSLDG00000003019	prpf19	99	85.944	Seriola_lalandi_dorsalis
ENSCLAG00000003338	PRPF19	100	96.781	ENSSPUG00000019328	PRPF19	99	96.781	Sphenodon_punctatus
ENSCLAG00000003338	PRPF19	100	86.145	ENSSPAG00000008546	prpf19	99	86.145	Stegastes_partitus
ENSCLAG00000003338	PRPF19	100	99.396	ENSSSCG00000013107	PRPF19	99	99.396	Sus_scrofa
ENSCLAG00000003338	PRPF19	100	97.183	ENSTGUG00000006319	PRPF19	99	97.183	Taeniopygia_guttata
ENSCLAG00000003338	PRPF19	99	84.909	ENSTRUG00000008502	prpf19	99	84.569	Takifugu_rubripes
ENSCLAG00000003338	PRPF19	99	80.466	ENSTNIG00000014219	prpf19	99	67.928	Tetraodon_nigroviridis
ENSCLAG00000003338	PRPF19	100	99.195	ENSTTRG00000012476	PRPF19	99	99.195	Tursiops_truncatus
ENSCLAG00000003338	PRPF19	100	99.195	ENSUAMG00000011280	PRPF19	99	99.195	Ursus_americanus
ENSCLAG00000003338	PRPF19	85	98.815	ENSUMAG00000011609	PRPF19	83	98.815	Ursus_maritimus
ENSCLAG00000003338	PRPF19	100	99.119	ENSVPAG00000010516	PRPF19	100	99.119	Vicugna_pacos
ENSCLAG00000003338	PRPF19	100	99.195	ENSVVUG00000005291	PRPF19	99	99.195	Vulpes_vulpes
ENSCLAG00000003338	PRPF19	100	85.648	ENSXETG00000011938	prpf19	99	85.450	Xenopus_tropicalis
ENSCLAG00000003338	PRPF19	99	84.708	ENSXCOG00000003141	prpf19	99	84.369	Xiphophorus_couchianus
ENSCLAG00000003338	PRPF19	99	84.909	ENSXMAG00000008485	prpf19	99	84.569	Xiphophorus_maculatus