EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000003497 (Gene tree)
Gene ID: 102021339
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 31394 bases
Position: chrJH721938.1:8010056-8041449
Accession: 102021339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000004926	ResIII	PF04851.15	5.5e-07	1	1
ENSCLAP00000004926	DEAD	PF00270.29	5.5e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005018	DDX42-201	2793	XM_005402189	ENSCLAP00000004926	930 (aa)	XP_005402246	-

Gene Model

Click here to download ENSCLAG00000003497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000003497	DDX42	58	38.036	ENSCLAG00000006874	DDX5	91	37.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003497	DDX42	100	95.319	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSCLAG00000003497	DDX42	91	76.796	ENSAPOG00000017675	ddx42	99	72.807	Acanthochromis_polyacanthus
ENSCLAG00000003497	DDX42	100	96.257	ENSAMEG00000003200	DDX42	100	96.257	Ailuropoda_melanoleuca
ENSCLAG00000003497	DDX42	84	71.627	ENSACIG00000007376	ddx42	99	73.208	Amphilophus_citrinellus
ENSCLAG00000003497	DDX42	91	76.706	ENSAOCG00000003520	ddx42	99	72.853	Amphiprion_ocellaris
ENSCLAG00000003497	DDX42	91	76.769	ENSAPEG00000000984	ddx42	99	72.950	Amphiprion_percula
ENSCLAG00000003497	DDX42	99	71.279	ENSATEG00000022920	ddx42	99	73.461	Anabas_testudineus
ENSCLAG00000003497	DDX42	100	85.048	ENSAPLG00000010544	DDX42	100	85.248	Anas_platyrhynchos
ENSCLAG00000003497	DDX42	100	84.485	ENSACAG00000003994	DDX42	99	84.926	Anolis_carolinensis
ENSCLAG00000003497	DDX42	100	96.348	ENSANAG00000035693	DDX42	100	96.348	Aotus_nancymaae
ENSCLAG00000003497	DDX42	91	76.415	ENSACLG00000025113	ddx42	99	73.383	Astatotilapia_calliptera
ENSCLAG00000003497	DDX42	78	80.926	ENSAMXG00000011435	ddx42	100	70.124	Astyanax_mexicanus
ENSCLAG00000003497	DDX42	100	94.771	ENSBTAG00000021058	DDX42	100	95.299	Bos_taurus
ENSCLAG00000003497	DDX42	64	52.673	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSCLAG00000003497	DDX42	100	96.455	ENSCJAG00000019649	DDX42	99	98.564	Callithrix_jacchus
ENSCLAG00000003497	DDX42	100	96.364	ENSCAFG00000012818	DDX42	100	96.364	Canis_familiaris
ENSCLAG00000003497	DDX42	100	96.471	ENSCAFG00020026631	DDX42	100	96.471	Canis_lupus_dingo
ENSCLAG00000003497	DDX42	100	95.106	ENSCHIG00000014431	DDX42	100	95.106	Capra_hircus
ENSCLAG00000003497	DDX42	100	95.091	ENSTSYG00000001380	DDX42	100	95.091	Carlito_syrichta
ENSCLAG00000003497	DDX42	73	77.548	ENSCAPG00000013621	DDX42	94	77.548	Cavia_aperea
ENSCLAG00000003497	DDX42	100	98.281	ENSCPOG00000005633	DDX42	100	98.281	Cavia_porcellus
ENSCLAG00000003497	DDX42	100	91.192	ENSCCAG00000020612	DDX42	100	95.320	Cebus_capucinus
ENSCLAG00000003497	DDX42	100	96.026	ENSCATG00000030490	DDX42	100	96.026	Cercocebus_atys
ENSCLAG00000003497	DDX42	100	91.534	ENSCSAG00000003914	DDX42	100	91.534	Chlorocebus_sabaeus
ENSCLAG00000003497	DDX42	79	95.536	ENSCHOG00000006241	DDX42	79	95.536	Choloepus_hoffmanni
ENSCLAG00000003497	DDX42	100	84.150	ENSCPBG00000026682	DDX42	100	84.672	Chrysemys_picta_bellii
ENSCLAG00000003497	DDX42	100	96.133	ENSCANG00000034663	DDX42	99	97.410	Colobus_angolensis_palliatus
ENSCLAG00000003497	DDX42	100	95.918	ENSCGRG00001009775	Ddx42	100	96.348	Cricetulus_griseus_chok1gshd
ENSCLAG00000003497	DDX42	100	95.918	ENSCGRG00000011718	Ddx42	100	96.348	Cricetulus_griseus_crigri
ENSCLAG00000003497	DDX42	91	74.498	ENSCSEG00000021574	ddx42	99	71.154	Cynoglossus_semilaevis
ENSCLAG00000003497	DDX42	100	70.940	ENSCVAG00000011404	ddx42	99	72.175	Cyprinodon_variegatus
ENSCLAG00000003497	DDX42	100	69.804	ENSDARG00000037928	ddx42	99	71.234	Danio_rerio
ENSCLAG00000003497	DDX42	100	89.670	ENSDNOG00000007961	DDX42	100	89.670	Dasypus_novemcinctus
ENSCLAG00000003497	DDX42	100	88.210	ENSDORG00000004199	Ddx42	100	87.889	Dipodomys_ordii
ENSCLAG00000003497	DDX42	66	60.514	FBgn0036104	CG6418	92	54.025	Drosophila_melanogaster
ENSCLAG00000003497	DDX42	84	70.833	ENSEBUG00000001155	ddx42	94	70.833	Eptatretus_burgeri
ENSCLAG00000003497	DDX42	100	97.222	ENSEASG00005013089	DDX42	100	97.222	Equus_asinus_asinus
ENSCLAG00000003497	DDX42	100	97.115	ENSECAG00000022684	DDX42	100	97.115	Equus_caballus
ENSCLAG00000003497	DDX42	67	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSCLAG00000003497	DDX42	100	69.937	ENSELUG00000020593	ddx42	100	70.768	Esox_lucius
ENSCLAG00000003497	DDX42	100	97.005	ENSFCAG00000003499	DDX42	100	97.005	Felis_catus
ENSCLAG00000003497	DDX42	94	85.941	ENSFALG00000004675	DDX42	77	85.941	Ficedula_albicollis
ENSCLAG00000003497	DDX42	100	98.605	ENSFDAG00000020516	DDX42	100	98.605	Fukomys_damarensis
ENSCLAG00000003497	DDX42	100	70.224	ENSFHEG00000023290	ddx42	99	71.535	Fundulus_heteroclitus
ENSCLAG00000003497	DDX42	76	78.138	ENSGMOG00000004595	ddx42	88	78.138	Gadus_morhua
ENSCLAG00000003497	DDX42	100	82.762	ENSGALG00000000581	DDX42	100	83.385	Gallus_gallus
ENSCLAG00000003497	DDX42	91	74.823	ENSGAFG00000011846	ddx42	96	73.444	Gambusia_affinis
ENSCLAG00000003497	DDX42	99	68.844	ENSGACG00000009782	ddx42	100	68.522	Gasterosteus_aculeatus
ENSCLAG00000003497	DDX42	100	84.293	ENSGAGG00000024411	DDX42	99	84.293	Gopherus_agassizii
ENSCLAG00000003497	DDX42	100	96.348	ENSGGOG00000006779	DDX42	100	96.348	Gorilla_gorilla
ENSCLAG00000003497	DDX42	91	76.651	ENSHBUG00000008705	ddx42	99	73.595	Haplochromis_burtoni
ENSCLAG00000003497	DDX42	100	94.086	ENSHGLG00000010024	DDX42	100	94.086	Heterocephalus_glaber_female
ENSCLAG00000003497	DDX42	94	75.402	ENSHGLG00100007138	-	95	75.402	Heterocephalus_glaber_male
ENSCLAG00000003497	DDX42	100	97.754	ENSHGLG00100004479	-	100	97.754	Heterocephalus_glaber_male
ENSCLAG00000003497	DDX42	84	78.173	ENSHCOG00000003357	ddx42	99	70.204	Hippocampus_comes
ENSCLAG00000003497	DDX42	80	79.657	ENSIPUG00000013327	ddx42	100	70.359	Ictalurus_punctatus
ENSCLAG00000003497	DDX42	100	97.747	ENSSTOG00000008922	DDX42	100	97.747	Ictidomys_tridecemlineatus
ENSCLAG00000003497	DDX42	100	96.344	ENSJJAG00000011727	Ddx42	100	96.344	Jaculus_jaculus
ENSCLAG00000003497	DDX42	99	71.489	ENSKMAG00000009914	ddx42	99	72.487	Kryptolebias_marmoratus
ENSCLAG00000003497	DDX42	100	67.918	ENSLBEG00000004687	ddx42	99	67.373	Labrus_bergylta
ENSCLAG00000003497	DDX42	99	76.502	ENSLACG00000013476	DDX42	97	78.433	Latimeria_chalumnae
ENSCLAG00000003497	DDX42	100	75.000	ENSLOCG00000011764	ddx42	100	75.241	Lepisosteus_oculatus
ENSCLAG00000003497	DDX42	100	96.245	ENSLAFG00000003249	DDX42	100	96.245	Loxodonta_africana
ENSCLAG00000003497	DDX42	100	96.026	ENSMFAG00000031356	DDX42	100	96.026	Macaca_fascicularis
ENSCLAG00000003497	DDX42	100	96.022	ENSMMUG00000016762	DDX42	100	96.022	Macaca_mulatta
ENSCLAG00000003497	DDX42	100	96.026	ENSMNEG00000038250	DDX42	100	96.026	Macaca_nemestrina
ENSCLAG00000003497	DDX42	100	95.319	ENSMLEG00000043080	DDX42	100	95.319	Mandrillus_leucophaeus
ENSCLAG00000003497	DDX42	91	77.541	ENSMAMG00000021888	ddx42	98	73.016	Mastacembelus_armatus
ENSCLAG00000003497	DDX42	91	76.415	ENSMZEG00005023103	ddx42	99	73.383	Maylandia_zebra
ENSCLAG00000003497	DDX42	100	83.058	ENSMGAG00000001822	DDX42	100	83.161	Meleagris_gallopavo
ENSCLAG00000003497	DDX42	76	97.301	ENSMAUG00000020774	-	94	97.301	Mesocricetus_auratus
ENSCLAG00000003497	DDX42	100	96.992	ENSMICG00000009952	DDX42	100	96.992	Microcebus_murinus
ENSCLAG00000003497	DDX42	100	95.166	ENSMOCG00000015504	Ddx42	100	95.166	Microtus_ochrogaster
ENSCLAG00000003497	DDX42	90	72.976	ENSMMOG00000016963	ddx42	87	71.314	Mola_mola
ENSCLAG00000003497	DDX42	50	98.073	ENSMODG00000009917	-	98	98.073	Monodelphis_domestica
ENSCLAG00000003497	DDX42	99	72.068	ENSMALG00000007800	ddx42	99	72.601	Monopterus_albus
ENSCLAG00000003497	DDX42	100	95.918	MGP_CAROLIEiJ_G0017314	Ddx42	100	96.348	Mus_caroli
ENSCLAG00000003497	DDX42	100	95.918	ENSMUSG00000020705	Ddx42	100	96.348	Mus_musculus
ENSCLAG00000003497	DDX42	79	99.553	MGP_PahariEiJ_G0018444	-	100	99.553	Mus_pahari
ENSCLAG00000003497	DDX42	100	95.918	MGP_SPRETEiJ_G0018158	Ddx42	100	96.348	Mus_spretus
ENSCLAG00000003497	DDX42	100	96.277	ENSMPUG00000014921	DDX42	100	96.277	Mustela_putorius_furo
ENSCLAG00000003497	DDX42	100	95.053	ENSMLUG00000011645	DDX42	100	95.053	Myotis_lucifugus
ENSCLAG00000003497	DDX42	100	96.022	ENSNGAG00000021897	Ddx42	100	96.022	Nannospalax_galili
ENSCLAG00000003497	DDX42	91	75.383	ENSNBRG00000004466	ddx42	99	72.046	Neolamprologus_brichardi
ENSCLAG00000003497	DDX42	100	95.914	ENSNLEG00000004248	DDX42	99	97.270	Nomascus_leucogenys
ENSCLAG00000003497	DDX42	74	82.788	ENSMEUG00000013227	-	85	82.788	Notamacropus_eugenii
ENSCLAG00000003497	DDX42	100	94.675	ENSOPRG00000014960	DDX42	100	94.675	Ochotona_princeps
ENSCLAG00000003497	DDX42	100	95.484	ENSODEG00000007810	DDX42	100	95.484	Octodon_degus
ENSCLAG00000003497	DDX42	91	76.796	ENSONIG00000000734	ddx42	99	73.418	Oreochromis_niloticus
ENSCLAG00000003497	DDX42	58	92.393	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSCLAG00000003497	DDX42	95	95.179	ENSOCUG00000004304	DDX42	88	95.179	Oryctolagus_cuniculus
ENSCLAG00000003497	DDX42	100	71.672	ENSORLG00000002395	ddx42	100	70.864	Oryzias_latipes
ENSCLAG00000003497	DDX42	100	72.021	ENSORLG00020011621	ddx42	100	72.553	Oryzias_latipes_hni
ENSCLAG00000003497	DDX42	100	71.580	ENSORLG00015004487	ddx42	100	72.340	Oryzias_latipes_hsok
ENSCLAG00000003497	DDX42	90	76.576	ENSOMEG00000020093	ddx42	100	71.911	Oryzias_melastigma
ENSCLAG00000003497	DDX42	100	96.060	ENSOGAG00000006872	DDX42	100	96.060	Otolemur_garnettii
ENSCLAG00000003497	DDX42	100	93.783	ENSOARG00000013540	DDX42	100	94.304	Ovis_aries
ENSCLAG00000003497	DDX42	100	96.133	ENSPPAG00000007496	DDX42	100	96.133	Pan_paniscus
ENSCLAG00000003497	DDX42	100	97.112	ENSPPRG00000002740	DDX42	100	97.112	Panthera_pardus
ENSCLAG00000003497	DDX42	100	97.005	ENSPTIG00000009932	DDX42	100	97.005	Panthera_tigris_altaica
ENSCLAG00000003497	DDX42	100	96.133	ENSPTRG00000009523	DDX42	100	96.133	Pan_troglodytes
ENSCLAG00000003497	DDX42	100	96.026	ENSPANG00000020990	DDX42	100	96.026	Papio_anubis
ENSCLAG00000003497	DDX42	100	70.588	ENSPKIG00000002901	ddx42	100	70.909	Paramormyrops_kingsleyae
ENSCLAG00000003497	DDX42	86	92.298	ENSPSIG00000010289	DDX42	98	92.118	Pelodiscus_sinensis
ENSCLAG00000003497	DDX42	100	67.091	ENSPMGG00000009323	ddx42	100	68.326	Periophthalmus_magnuspinnatus
ENSCLAG00000003497	DDX42	100	96.567	ENSPEMG00000006755	Ddx42	100	96.567	Peromyscus_maniculatus_bairdii
ENSCLAG00000003497	DDX42	80	72.346	ENSPMAG00000005580	ddx42	100	73.263	Petromyzon_marinus
ENSCLAG00000003497	DDX42	100	91.958	ENSPCIG00000009093	DDX42	100	92.169	Phascolarctos_cinereus
ENSCLAG00000003497	DDX42	100	69.710	ENSPFOG00000014104	ddx42	99	72.093	Poecilia_formosa
ENSCLAG00000003497	DDX42	100	69.710	ENSPLAG00000010522	ddx42	99	72.093	Poecilia_latipinna
ENSCLAG00000003497	DDX42	100	70.031	ENSPMEG00000010744	ddx42	99	71.639	Poecilia_mexicana
ENSCLAG00000003497	DDX42	100	69.247	ENSPREG00000009926	ddx42	99	71.042	Poecilia_reticulata
ENSCLAG00000003497	DDX42	100	93.432	ENSPPYG00000008531	DDX42	100	93.432	Pongo_abelii
ENSCLAG00000003497	DDX42	92	90.603	ENSPCAG00000002474	DDX42	100	90.603	Procavia_capensis
ENSCLAG00000003497	DDX42	100	86.645	ENSPCOG00000001559	DDX42	98	89.396	Propithecus_coquereli
ENSCLAG00000003497	DDX42	100	92.209	ENSPVAG00000000160	DDX42	100	92.316	Pteropus_vampyrus
ENSCLAG00000003497	DDX42	75	74.184	ENSPNYG00000013954	ddx42	97	70.713	Pundamilia_nyererei
ENSCLAG00000003497	DDX42	81	77.349	ENSPNAG00000017352	ddx42	99	70.219	Pygocentrus_nattereri
ENSCLAG00000003497	DDX42	100	95.596	ENSRNOG00000009474	Ddx42	100	96.026	Rattus_norvegicus
ENSCLAG00000003497	DDX42	100	96.026	ENSRBIG00000004781	DDX42	99	97.410	Rhinopithecus_bieti
ENSCLAG00000003497	DDX42	100	96.133	ENSRROG00000029794	DDX42	100	96.133	Rhinopithecus_roxellana
ENSCLAG00000003497	DDX42	100	96.563	ENSSBOG00000029624	DDX42	100	96.563	Saimiri_boliviensis_boliviensis
ENSCLAG00000003497	DDX42	100	91.958	ENSSHAG00000012896	-	100	92.169	Sarcophilus_harrisii
ENSCLAG00000003497	DDX42	71	60.921	ENSSHAG00000007919	-	99	60.921	Sarcophilus_harrisii
ENSCLAG00000003497	DDX42	81	81.735	ENSSFOG00015014064	ddx42	81	81.866	Scleropages_formosus
ENSCLAG00000003497	DDX42	99	71.902	ENSSMAG00000009077	ddx42	99	72.574	Scophthalmus_maximus
ENSCLAG00000003497	DDX42	99	72.766	ENSSDUG00000022221	ddx42	99	73.355	Seriola_dumerili
ENSCLAG00000003497	DDX42	99	72.532	ENSSLDG00000018483	ddx42	99	72.805	Seriola_lalandi_dorsalis
ENSCLAG00000003497	DDX42	100	95.299	ENSSARG00000009847	DDX42	100	95.299	Sorex_araneus
ENSCLAG00000003497	DDX42	100	84.100	ENSSPUG00000018806	DDX42	100	84.100	Sphenodon_punctatus
ENSCLAG00000003497	DDX42	91	76.678	ENSSPAG00000013055	ddx42	99	72.708	Stegastes_partitus
ENSCLAG00000003497	DDX42	85	94.665	ENSSSCG00000017289	DDX42	97	94.665	Sus_scrofa
ENSCLAG00000003497	DDX42	100	83.246	ENSTGUG00000001931	DDX42	100	83.246	Taeniopygia_guttata
ENSCLAG00000003497	DDX42	99	70.236	ENSTRUG00000010711	ddx42	99	81.333	Takifugu_rubripes
ENSCLAG00000003497	DDX42	82	93.824	ENSTBEG00000010159	DDX42	100	93.824	Tupaia_belangeri
ENSCLAG00000003497	DDX42	100	96.158	ENSTTRG00000006962	DDX42	100	96.158	Tursiops_truncatus
ENSCLAG00000003497	DDX42	100	96.150	ENSUAMG00000007321	DDX42	100	96.150	Ursus_americanus
ENSCLAG00000003497	DDX42	100	95.401	ENSUMAG00000017438	DDX42	100	95.401	Ursus_maritimus
ENSCLAG00000003497	DDX42	100	86.966	ENSVPAG00000009633	DDX42	100	86.966	Vicugna_pacos
ENSCLAG00000003497	DDX42	100	96.684	ENSVVUG00000006095	DDX42	100	96.684	Vulpes_vulpes
ENSCLAG00000003497	DDX42	100	76.649	ENSXETG00000003245	ddx42	100	76.649	Xenopus_tropicalis
ENSCLAG00000003497	DDX42	85	70.338	ENSXCOG00000017560	ddx42	97	71.808	Xiphophorus_couchianus
ENSCLAG00000003497	DDX42	100	71.186	ENSXMAG00000008138	ddx42	99	72.650	Xiphophorus_maculatus