EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000003643 (Gene tree)
Gene ID: 102029868
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 146359 bases
Position: chrJH721881.1:3707510-3853868
Accession: 102029868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005132	UvrD-helicase	PF00580.21	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005225	TRANK1-201	10769	XM_005383682	ENSCLAP00000005132	2900 (aa)	XP_005383739	UPI00038E98BD

Gene Model

Click here to download ENSCLAG00000003643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003643's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003643	TRANK1	85	57.792	ENSAPLG00000010356	TRANK1	99	57.832	Anas_platyrhynchos
ENSCLAG00000003643	TRANK1	53	79.737	ENSCAFG00020001387	TRANK1	96	79.086	Canis_lupus_dingo
ENSCLAG00000003643	TRANK1	99	82.403	ENSTSYG00000025860	TRANK1	99	82.539	Carlito_syrichta
ENSCLAG00000003643	TRANK1	97	64.020	ENSCPBG00000013529	TRANK1	98	63.647	Chrysemys_picta_bellii
ENSCLAG00000003643	TRANK1	99	83.533	ENSCANG00000039915	TRANK1	99	82.429	Colobus_angolensis_palliatus
ENSCLAG00000003643	TRANK1	97	79.742	ENSDNOG00000003573	TRANK1	98	77.770	Dasypus_novemcinctus
ENSCLAG00000003643	TRANK1	99	81.610	ENSEASG00005007374	TRANK1	98	81.758	Equus_asinus_asinus
ENSCLAG00000003643	TRANK1	99	80.634	ENSECAG00000018264	TRANK1	98	80.736	Equus_caballus
ENSCLAG00000003643	TRANK1	83	79.496	ENSEEUG00000008528	TRANK1	100	79.496	Erinaceus_europaeus
ENSCLAG00000003643	TRANK1	99	56.026	ENSFALG00000002875	TRANK1	99	56.155	Ficedula_albicollis
ENSCLAG00000003643	TRANK1	71	60.313	ENSGALG00000037629	TRANK1	97	60.224	Gallus_gallus
ENSCLAG00000003643	TRANK1	90	62.491	ENSGAGG00000009012	TRANK1	100	62.288	Gopherus_agassizii
ENSCLAG00000003643	TRANK1	98	47.274	ENSLOCG00000004808	TRANK1	99	46.662	Lepisosteus_oculatus
ENSCLAG00000003643	TRANK1	99	56.935	ENSMGAG00000011934	TRANK1	99	56.733	Meleagris_gallopavo
ENSCLAG00000003643	TRANK1	99	82.191	ENSMLUG00000003537	TRANK1	100	82.365	Myotis_lucifugus
ENSCLAG00000003643	TRANK1	99	94.555	ENSODEG00000003882	TRANK1	98	93.815	Octodon_degus
ENSCLAG00000003643	TRANK1	98	61.057	ENSPSIG00000010217	TRANK1	98	61.162	Pelodiscus_sinensis
ENSCLAG00000003643	TRANK1	67	72.038	ENSPCAG00000002172	-	87	72.123	Procavia_capensis
ENSCLAG00000003643	TRANK1	82	75.653	ENSPVAG00000004199	TRANK1	100	75.702	Pteropus_vampyrus
ENSCLAG00000003643	TRANK1	99	83.635	ENSRBIG00000012281	TRANK1	99	82.481	Rhinopithecus_bieti
ENSCLAG00000003643	TRANK1	99	83.652	ENSRROG00000044487	TRANK1	99	82.584	Rhinopithecus_roxellana
ENSCLAG00000003643	TRANK1	61	86.992	ENSSARG00000007861	-	74	86.992	Sorex_araneus
ENSCLAG00000003643	TRANK1	74	66.544	ENSSPUG00000015974	TRANK1	93	76.923	Sphenodon_punctatus
ENSCLAG00000003643	TRANK1	84	58.333	ENSTGUG00000005694	TRANK1	100	58.481	Taeniopygia_guttata
ENSCLAG00000003643	TRANK1	53	80.339	ENSUAMG00000027609	-	97	79.386	Ursus_americanus
ENSCLAG00000003643	TRANK1	53	79.460	ENSUMAG00000006416	TRANK1	97	78.509	Ursus_maritimus
ENSCLAG00000003643	TRANK1	53	79.425	ENSVVUG00000007788	TRANK1	96	78.773	Vulpes_vulpes