EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000003707 (Gene tree)
Gene ID: 102025576
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 30587 bases
Position: chrJH721939.1:9319555-9350141
Accession: 102025576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005221	RRM_1	PF00076.22	2e-43	1	3
ENSCLAP00000005221	RRM_1	PF00076.22	2e-43	2	3
ENSCLAP00000005221	RRM_1	PF00076.22	2e-43	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005317	RBM28-201	2166	XM_013503290	ENSCLAP00000005221	721 (aa)	XP_013358744	-

Gene Model

Click here to download ENSCLAG00000003707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003707	RBM28	90	95.000	ENSG00000106344	RBM28	100	80.158	Homo_sapiens
ENSCLAG00000003707	RBM28	100	89.583	ENSAMEG00000004776	RBM28	92	89.583	Ailuropoda_melanoleuca
ENSCLAG00000003707	RBM28	58	55.374	ENSACIG00000023153	rbm28	99	51.674	Amphilophus_citrinellus
ENSCLAG00000003707	RBM28	60	54.091	ENSAOCG00000000462	rbm28	60	53.579	Amphiprion_ocellaris
ENSCLAG00000003707	RBM28	60	53.864	ENSAPEG00000012996	rbm28	62	52.083	Amphiprion_percula
ENSCLAG00000003707	RBM28	61	51.899	ENSATEG00000001672	rbm28	64	50.913	Anabas_testudineus
ENSCLAG00000003707	RBM28	100	80.662	ENSANAG00000033922	RBM28	100	79.735	Aotus_nancymaae
ENSCLAG00000003707	RBM28	100	47.547	ENSACLG00000025024	rbm28	100	45.455	Astatotilapia_calliptera
ENSCLAG00000003707	RBM28	60	57.175	ENSAMXG00000000763	rbm28	99	60.183	Astyanax_mexicanus
ENSCLAG00000003707	RBM28	90	95.000	ENSBTAG00000017001	RBM28	100	95.000	Bos_taurus
ENSCLAG00000003707	RBM28	100	79.396	ENSCJAG00000017731	RBM28	100	78.215	Callithrix_jacchus
ENSCLAG00000003707	RBM28	100	79.548	ENSCAFG00000001667	RBM28	100	79.548	Canis_familiaris
ENSCLAG00000003707	RBM28	100	79.548	ENSCAFG00020021648	RBM28	100	79.548	Canis_lupus_dingo
ENSCLAG00000003707	RBM28	100	79.283	ENSCHIG00000014146	RBM28	100	79.150	Capra_hircus
ENSCLAG00000003707	RBM28	90	90.000	ENSTSYG00000002892	RBM28	100	90.000	Carlito_syrichta
ENSCLAG00000003707	RBM28	83	63.434	ENSCAPG00000013218	RBM28	100	63.116	Cavia_aperea
ENSCLAG00000003707	RBM28	100	86.280	ENSCPOG00000006253	RBM28	100	85.488	Cavia_porcellus
ENSCLAG00000003707	RBM28	100	79.447	ENSCCAG00000035105	RBM28	100	79.051	Cebus_capucinus
ENSCLAG00000003707	RBM28	90	92.500	ENSCATG00000040497	RBM28	100	78.609	Cercocebus_atys
ENSCLAG00000003707	RBM28	100	80.501	ENSCSAG00000010161	RBM28	100	79.578	Chlorocebus_sabaeus
ENSCLAG00000003707	RBM28	59	87.097	ENSCHOG00000001994	-	63	87.097	Choloepus_hoffmanni
ENSCLAG00000003707	RBM28	52	61.628	ENSCPBG00000018088	RBM28	80	61.628	Chrysemys_picta_bellii
ENSCLAG00000003707	RBM28	71	42.082	ENSCING00000009238	-	85	40.000	Ciona_intestinalis
ENSCLAG00000003707	RBM28	80	95.000	ENSCANG00000038397	RBM28	100	80.368	Colobus_angolensis_palliatus
ENSCLAG00000003707	RBM28	69	82.828	ENSCGRG00001021278	Rbm28	100	75.320	Cricetulus_griseus_chok1gshd
ENSCLAG00000003707	RBM28	100	76.540	ENSCGRG00000005098	Rbm28	100	76.540	Cricetulus_griseus_crigri
ENSCLAG00000003707	RBM28	100	48.214	ENSCSEG00000004212	rbm28	64	53.086	Cynoglossus_semilaevis
ENSCLAG00000003707	RBM28	61	56.674	ENSCVAG00000010493	rbm28	61	54.316	Cyprinodon_variegatus
ENSCLAG00000003707	RBM28	100	78.760	ENSDNOG00000001124	RBM28	100	78.760	Dasypus_novemcinctus
ENSCLAG00000003707	RBM28	68	82.863	ENSDORG00000004184	Rbm28	97	83.065	Dipodomys_ordii
ENSCLAG00000003707	RBM28	66	36.311	FBgn0260456	CG4806	92	32.053	Drosophila_melanogaster
ENSCLAG00000003707	RBM28	100	67.593	ENSETEG00000007130	RBM28	99	67.593	Echinops_telfairi
ENSCLAG00000003707	RBM28	82	46.083	ENSEBUG00000004419	rbm28	98	39.067	Eptatretus_burgeri
ENSCLAG00000003707	RBM28	100	79.400	ENSEASG00005008528	RBM28	100	79.661	Equus_asinus_asinus
ENSCLAG00000003707	RBM28	100	78.646	ENSECAG00000007745	RBM28	100	78.906	Equus_caballus
ENSCLAG00000003707	RBM28	100	70.249	ENSEEUG00000002389	RBM28	100	70.249	Erinaceus_europaeus
ENSCLAG00000003707	RBM28	100	47.832	ENSELUG00000020602	rbm28	100	48.608	Esox_lucius
ENSCLAG00000003707	RBM28	90	95.000	ENSFCAG00000000946	RBM28	100	95.000	Felis_catus
ENSCLAG00000003707	RBM28	100	86.968	ENSFDAG00000010169	RBM28	100	86.303	Fukomys_damarensis
ENSCLAG00000003707	RBM28	84	52.620	ENSGMOG00000007091	rbm28	65	50.746	Gadus_morhua
ENSCLAG00000003707	RBM28	60	56.125	ENSGAFG00000004802	rbm28	97	56.125	Gambusia_affinis
ENSCLAG00000003707	RBM28	60	55.125	ENSGACG00000012612	rbm28	100	48.153	Gasterosteus_aculeatus
ENSCLAG00000003707	RBM28	70	80.220	ENSGAGG00000008873	RBM28	86	80.220	Gopherus_agassizii
ENSCLAG00000003707	RBM28	95	79.612	ENSGGOG00000004644	RBM28	97	79.334	Gorilla_gorilla
ENSCLAG00000003707	RBM28	93	47.059	ENSHBUG00000009611	rbm28	59	55.125	Haplochromis_burtoni
ENSCLAG00000003707	RBM28	100	85.771	ENSHGLG00000005409	RBM28	100	85.375	Heterocephalus_glaber_female
ENSCLAG00000003707	RBM28	100	85.771	ENSHGLG00100016458	RBM28	100	85.372	Heterocephalus_glaber_male
ENSCLAG00000003707	RBM28	99	40.716	ENSHCOG00000010597	rbm28	99	40.915	Hippocampus_comes
ENSCLAG00000003707	RBM28	58	52.019	ENSIPUG00000007103	rbm28	92	49.462	Ictalurus_punctatus
ENSCLAG00000003707	RBM28	100	80.418	ENSSTOG00000002169	RBM28	100	80.679	Ictidomys_tridecemlineatus
ENSCLAG00000003707	RBM28	100	75.815	ENSJJAG00000022400	Rbm28	100	76.495	Jaculus_jaculus
ENSCLAG00000003707	RBM28	87	56.027	ENSLBEG00000012998	rbm28	100	46.716	Labrus_bergylta
ENSCLAG00000003707	RBM28	100	77.381	ENSLAFG00000010717	RBM28	100	76.587	Loxodonta_africana
ENSCLAG00000003707	RBM28	90	92.500	ENSMFAG00000031036	RBM28	100	78.740	Macaca_fascicularis
ENSCLAG00000003707	RBM28	90	92.500	ENSMMUG00000007250	RBM28	100	79.030	Macaca_mulatta
ENSCLAG00000003707	RBM28	90	92.500	ENSMNEG00000036970	RBM28	100	78.996	Macaca_nemestrina
ENSCLAG00000003707	RBM28	83	78.443	ENSMLEG00000037717	RBM28	100	78.443	Mandrillus_leucophaeus
ENSCLAG00000003707	RBM28	100	48.087	ENSMAMG00000008525	rbm28	100	48.105	Mastacembelus_armatus
ENSCLAG00000003707	RBM28	93	47.035	ENSMZEG00005019625	rbm28	67	54.582	Maylandia_zebra
ENSCLAG00000003707	RBM28	69	81.010	ENSMAUG00000002263	Rbm28	100	74.422	Mesocricetus_auratus
ENSCLAG00000003707	RBM28	93	76.593	ENSMICG00000000107	RBM28	100	76.177	Microcebus_murinus
ENSCLAG00000003707	RBM28	100	78.117	ENSMOCG00000014615	Rbm28	100	78.117	Microtus_ochrogaster
ENSCLAG00000003707	RBM28	60	54.713	ENSMMOG00000008600	rbm28	96	52.916	Mola_mola
ENSCLAG00000003707	RBM28	100	67.323	ENSMODG00000015151	RBM28	100	67.624	Monodelphis_domestica
ENSCLAG00000003707	RBM28	61	53.468	ENSMALG00000006419	rbm28	61	51.695	Monopterus_albus
ENSCLAG00000003707	RBM28	100	78.353	MGP_CAROLIEiJ_G0028162	Rbm28	100	78.353	Mus_caroli
ENSCLAG00000003707	RBM28	100	78.486	ENSMUSG00000029701	Rbm28	100	78.220	Mus_musculus
ENSCLAG00000003707	RBM28	100	78.780	MGP_PahariEiJ_G0021920	Rbm28	100	79.576	Mus_pahari
ENSCLAG00000003707	RBM28	100	78.619	MGP_SPRETEiJ_G0029162	Rbm28	100	78.353	Mus_spretus
ENSCLAG00000003707	RBM28	100	78.760	ENSMPUG00000006511	RBM28	100	78.760	Mustela_putorius_furo
ENSCLAG00000003707	RBM28	100	77.559	ENSMLUG00000002186	RBM28	100	78.478	Myotis_lucifugus
ENSCLAG00000003707	RBM28	100	78.088	ENSNGAG00000006480	-	100	78.088	Nannospalax_galili
ENSCLAG00000003707	RBM28	100	76.159	ENSNGAG00000017946	-	100	76.291	Nannospalax_galili
ENSCLAG00000003707	RBM28	90	95.000	ENSNLEG00000012307	RBM28	100	95.000	Nomascus_leucogenys
ENSCLAG00000003707	RBM28	80	71.175	ENSMEUG00000009611	RBM28	88	69.474	Notamacropus_eugenii
ENSCLAG00000003707	RBM28	90	69.939	ENSOPRG00000015140	RBM28	90	70.713	Ochotona_princeps
ENSCLAG00000003707	RBM28	100	84.197	ENSODEG00000003213	-	100	84.064	Octodon_degus
ENSCLAG00000003707	RBM28	76	94.221	ENSODEG00000013217	-	79	94.221	Octodon_degus
ENSCLAG00000003707	RBM28	61	54.367	ENSONIG00000014924	rbm28	100	47.282	Oreochromis_niloticus
ENSCLAG00000003707	RBM28	62	67.834	ENSOANG00000000815	-	100	61.599	Ornithorhynchus_anatinus
ENSCLAG00000003707	RBM28	100	76.402	ENSOCUG00000003009	RBM28	100	76.532	Oryctolagus_cuniculus
ENSCLAG00000003707	RBM28	99	47.730	ENSORLG00000009636	rbm28	62	54.603	Oryzias_latipes
ENSCLAG00000003707	RBM28	61	56.306	ENSORLG00020002123	rbm28	66	54.375	Oryzias_latipes_hni
ENSCLAG00000003707	RBM28	86	56.180	ENSORLG00015015030	rbm28	98	56.180	Oryzias_latipes_hsok
ENSCLAG00000003707	RBM28	61	57.206	ENSOMEG00000007801	rbm28	64	55.464	Oryzias_melastigma
ENSCLAG00000003707	RBM28	90	90.000	ENSOGAG00000006011	RBM28	100	90.000	Otolemur_garnettii
ENSCLAG00000003707	RBM28	100	78.808	ENSOARG00000002547	RBM28	100	78.808	Ovis_aries
ENSCLAG00000003707	RBM28	90	95.000	ENSPPAG00000041730	RBM28	100	79.685	Pan_paniscus
ENSCLAG00000003707	RBM28	90	95.000	ENSPPRG00000004420	RBM28	100	95.000	Panthera_pardus
ENSCLAG00000003707	RBM28	90	95.000	ENSPTIG00000008550	RBM28	100	95.000	Panthera_tigris_altaica
ENSCLAG00000003707	RBM28	90	95.000	ENSPTRG00000019659	RBM28	100	79.948	Pan_troglodytes
ENSCLAG00000003707	RBM28	90	92.500	ENSPANG00000022295	RBM28	100	79.030	Papio_anubis
ENSCLAG00000003707	RBM28	99	48.500	ENSPKIG00000023453	rbm28	64	51.992	Paramormyrops_kingsleyae
ENSCLAG00000003707	RBM28	83	54.846	ENSPMGG00000012840	rbm28	99	51.789	Periophthalmus_magnuspinnatus
ENSCLAG00000003707	RBM28	100	79.041	ENSPEMG00000020673	Rbm28	100	78.767	Peromyscus_maniculatus_bairdii
ENSCLAG00000003707	RBM28	50	46.011	ENSPMAG00000002948	-	99	46.505	Petromyzon_marinus
ENSCLAG00000003707	RBM28	100	66.754	ENSPCIG00000012810	RBM28	100	66.754	Phascolarctos_cinereus
ENSCLAG00000003707	RBM28	60	55.804	ENSPFOG00000018209	rbm28	100	47.970	Poecilia_formosa
ENSCLAG00000003707	RBM28	60	55.481	ENSPLAG00000016078	rbm28	96	47.570	Poecilia_latipinna
ENSCLAG00000003707	RBM28	60	55.928	ENSPMEG00000004292	rbm28	100	48.030	Poecilia_mexicana
ENSCLAG00000003707	RBM28	59	55.378	ENSPREG00000014287	rbm28	98	47.294	Poecilia_reticulata
ENSCLAG00000003707	RBM28	100	80.501	ENSPPYG00000017975	RBM28	100	79.974	Pongo_abelii
ENSCLAG00000003707	RBM28	73	74.930	ENSPCAG00000008223	RBM28	83	74.792	Procavia_capensis
ENSCLAG00000003707	RBM28	90	95.000	ENSPCOG00000016797	RBM28	100	95.000	Propithecus_coquereli
ENSCLAG00000003707	RBM28	76	92.558	ENSPVAG00000005443	RBM28	77	92.558	Pteropus_vampyrus
ENSCLAG00000003707	RBM28	100	47.673	ENSPNYG00000014003	rbm28	63	53.521	Pundamilia_nyererei
ENSCLAG00000003707	RBM28	100	75.794	ENSRNOG00000005468	Rbm28	100	76.058	Rattus_norvegicus
ENSCLAG00000003707	RBM28	90	95.000	ENSRBIG00000033990	RBM28	100	79.058	Rhinopithecus_bieti
ENSCLAG00000003707	RBM28	90	95.000	ENSRROG00000040747	RBM28	100	79.161	Rhinopithecus_roxellana
ENSCLAG00000003707	RBM28	85	72.401	ENSSBOG00000012308	RBM28	100	68.690	Saimiri_boliviensis_boliviensis
ENSCLAG00000003707	RBM28	96	63.934	ENSSHAG00000017017	RBM28	99	63.661	Sarcophilus_harrisii
ENSCLAG00000003707	RBM28	61	56.473	ENSSFOG00015001231	rbm28	100	49.098	Scleropages_formosus
ENSCLAG00000003707	RBM28	61	53.288	ENSSMAG00000003885	rbm28	97	51.271	Scophthalmus_maximus
ENSCLAG00000003707	RBM28	71	49.714	ENSSDUG00000014270	rbm28	94	52.990	Seriola_dumerili
ENSCLAG00000003707	RBM28	61	55.310	ENSSLDG00000020099	rbm28	63	53.144	Seriola_lalandi_dorsalis
ENSCLAG00000003707	RBM28	76	86.577	ENSSARG00000008303	RBM28	76	86.577	Sorex_araneus
ENSCLAG00000003707	RBM28	64	75.862	ENSSPUG00000000838	RBM28	72	75.862	Sphenodon_punctatus
ENSCLAG00000003707	RBM28	60	52.655	ENSSPAG00000023305	rbm28	65	53.895	Stegastes_partitus
ENSCLAG00000003707	RBM28	100	77.302	ENSSSCG00000031847	RBM28	100	78.968	Sus_scrofa
ENSCLAG00000003707	RBM28	61	55.921	ENSTRUG00000013311	rbm28	99	46.154	Takifugu_rubripes
ENSCLAG00000003707	RBM28	99	48.649	ENSTNIG00000017962	rbm28	99	48.961	Tetraodon_nigroviridis
ENSCLAG00000003707	RBM28	85	88.095	ENSTBEG00000012749	RBM28	86	88.095	Tupaia_belangeri
ENSCLAG00000003707	RBM28	100	76.184	ENSTTRG00000013647	RBM28	100	76.184	Tursiops_truncatus
ENSCLAG00000003707	RBM28	100	73.333	ENSUAMG00000006949	RBM28	100	73.605	Ursus_americanus
ENSCLAG00000003707	RBM28	100	79.497	ENSUMAG00000005997	RBM28	100	79.497	Ursus_maritimus
ENSCLAG00000003707	RBM28	87	69.909	ENSVPAG00000008304	RBM28	87	70.213	Vicugna_pacos
ENSCLAG00000003707	RBM28	100	79.416	ENSVVUG00000007270	RBM28	100	79.416	Vulpes_vulpes
ENSCLAG00000003707	RBM28	99	51.531	ENSXETG00000009271	rbm28	99	52.753	Xenopus_tropicalis
ENSCLAG00000003707	RBM28	60	53.394	ENSXCOG00000020357	rbm28	98	51.805	Xiphophorus_couchianus
ENSCLAG00000003707	RBM28	60	54.788	ENSXMAG00000004415	rbm28	62	54.298	Xiphophorus_maculatus