EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000003765 (Gene tree)
Gene ID: 102027391
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 17361 bases
Position: chrJH721925.1:6336209-6353569
Accession: 102027391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005306	zf-U11-48K	PF05253.12	1.7e-09	1	1
ENSCLAP00000005305	zf-U11-48K	PF05253.12	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005402	SNRNP48-202	852	-	ENSCLAP00000005306	283 (aa)	-	-
ENSCLAT00000005401	SNRNP48-201	5037	XM_005398851	ENSCLAP00000005305	339 (aa)	XP_005398908	UPI00038E9642

Gene Model

Click here to download ENSCLAG00000003765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003765	SNRNP48	100	90.560	ENSG00000168566	SNRNP48	100	90.560	Homo_sapiens
ENSCLAG00000003765	SNRNP48	81	48.057	ENSAPOG00000021430	snrnp48	83	47.751	Acanthochromis_polyacanthus
ENSCLAG00000003765	SNRNP48	99	85.591	ENSAMEG00000017349	SNRNP48	100	84.726	Ailuropoda_melanoleuca
ENSCLAG00000003765	SNRNP48	98	43.824	ENSACIG00000002032	snrnp48	98	41.311	Amphilophus_citrinellus
ENSCLAG00000003765	SNRNP48	81	47.350	ENSAOCG00000010562	snrnp48	92	43.284	Amphiprion_ocellaris
ENSCLAG00000003765	SNRNP48	81	48.399	ENSAPEG00000003231	snrnp48	92	43.844	Amphiprion_percula
ENSCLAG00000003765	SNRNP48	77	50.000	ENSATEG00000020210	snrnp48	81	49.643	Anabas_testudineus
ENSCLAG00000003765	SNRNP48	85	62.416	ENSACAG00000002811	SNRNP48	89	63.448	Anolis_carolinensis
ENSCLAG00000003765	SNRNP48	100	89.971	ENSANAG00000033538	SNRNP48	100	89.971	Aotus_nancymaae
ENSCLAG00000003765	SNRNP48	93	45.141	ENSAMXG00000015309	snrnp48	84	47.183	Astyanax_mexicanus
ENSCLAG00000003765	SNRNP48	100	84.706	ENSBTAG00000001123	SNRNP48	100	85.000	Bos_taurus
ENSCLAG00000003765	SNRNP48	100	90.560	ENSCJAG00000021330	SNRNP48	100	90.560	Callithrix_jacchus
ENSCLAG00000003765	SNRNP48	99	87.798	ENSCAFG00000009574	SNRNP48	83	87.798	Canis_familiaris
ENSCLAG00000003765	SNRNP48	99	88.095	ENSCAFG00020013203	SNRNP48	99	88.095	Canis_lupus_dingo
ENSCLAG00000003765	SNRNP48	100	86.176	ENSCHIG00000015216	SNRNP48	100	86.471	Capra_hircus
ENSCLAG00000003765	SNRNP48	100	90.560	ENSTSYG00000000698	SNRNP48	100	90.560	Carlito_syrichta
ENSCLAG00000003765	SNRNP48	91	89.935	ENSCAPG00000006768	SNRNP48	100	88.925	Cavia_aperea
ENSCLAG00000003765	SNRNP48	100	94.100	ENSCPOG00000007910	SNRNP48	100	94.100	Cavia_porcellus
ENSCLAG00000003765	SNRNP48	100	89.086	ENSCCAG00000035652	SNRNP48	100	89.086	Cebus_capucinus
ENSCLAG00000003765	SNRNP48	100	90.265	ENSCATG00000033947	SNRNP48	100	90.265	Cercocebus_atys
ENSCLAG00000003765	SNRNP48	100	90.560	ENSCSAG00000007409	SNRNP48	100	90.560	Chlorocebus_sabaeus
ENSCLAG00000003765	SNRNP48	85	63.907	ENSCPBG00000019146	SNRNP48	90	64.746	Chrysemys_picta_bellii
ENSCLAG00000003765	SNRNP48	94	30.982	ENSCING00000004121	-	70	32.794	Ciona_intestinalis
ENSCLAG00000003765	SNRNP48	100	90.560	ENSCANG00000030017	SNRNP48	100	90.560	Colobus_angolensis_palliatus
ENSCLAG00000003765	SNRNP48	99	68.955	ENSCGRG00001008805	-	95	67.164	Cricetulus_griseus_chok1gshd
ENSCLAG00000003765	SNRNP48	100	87.021	ENSCGRG00001001076	-	100	86.136	Cricetulus_griseus_chok1gshd
ENSCLAG00000003765	SNRNP48	100	87.021	ENSCGRG00000007781	Snrnp48	100	86.136	Cricetulus_griseus_crigri
ENSCLAG00000003765	SNRNP48	76	48.106	ENSCSEG00000000722	snrnp48	72	48.462	Cynoglossus_semilaevis
ENSCLAG00000003765	SNRNP48	89	46.645	ENSCVAG00000019829	snrnp48	62	51.822	Cyprinodon_variegatus
ENSCLAG00000003765	SNRNP48	81	46.479	ENSDARG00000039989	snrnp48	83	45.172	Danio_rerio
ENSCLAG00000003765	SNRNP48	100	86.765	ENSDNOG00000014978	SNRNP48	100	86.765	Dasypus_novemcinctus
ENSCLAG00000003765	SNRNP48	99	87.906	ENSDORG00000015140	Snrnp48	99	87.611	Dipodomys_ordii
ENSCLAG00000003765	SNRNP48	52	33.766	ENSEBUG00000016376	-	67	34.302	Eptatretus_burgeri
ENSCLAG00000003765	SNRNP48	99	89.053	ENSEASG00005012021	SNRNP48	99	89.053	Equus_asinus_asinus
ENSCLAG00000003765	SNRNP48	100	89.676	ENSECAG00000026937	SNRNP48	100	89.676	Equus_caballus
ENSCLAG00000003765	SNRNP48	100	67.647	ENSEEUG00000015437	SNRNP48	99	65.000	Erinaceus_europaeus
ENSCLAG00000003765	SNRNP48	88	47.213	ENSELUG00000009766	snrnp48	78	47.350	Esox_lucius
ENSCLAG00000003765	SNRNP48	100	88.496	ENSFCAG00000018853	SNRNP48	100	88.496	Felis_catus
ENSCLAG00000003765	SNRNP48	83	66.781	ENSFALG00000007797	SNRNP48	92	66.782	Ficedula_albicollis
ENSCLAG00000003765	SNRNP48	99	92.604	ENSFDAG00000009231	SNRNP48	100	92.330	Fukomys_damarensis
ENSCLAG00000003765	SNRNP48	59	55.941	ENSFHEG00000014647	snrnp48	97	45.455	Fundulus_heteroclitus
ENSCLAG00000003765	SNRNP48	73	46.774	ENSGMOG00000018599	-	77	46.850	Gadus_morhua
ENSCLAG00000003765	SNRNP48	77	69.373	ENSGALG00000013005	SNRNP48	82	70.370	Gallus_gallus
ENSCLAG00000003765	SNRNP48	82	48.592	ENSGAFG00000021639	snrnp48	81	44.109	Gambusia_affinis
ENSCLAG00000003765	SNRNP48	73	49.801	ENSGACG00000017756	-	84	48.084	Gasterosteus_aculeatus
ENSCLAG00000003765	SNRNP48	83	63.423	ENSGAGG00000000865	SNRNP48	96	63.729	Gopherus_agassizii
ENSCLAG00000003765	SNRNP48	100	90.855	ENSGGOG00000013220	SNRNP48	100	90.855	Gorilla_gorilla
ENSCLAG00000003765	SNRNP48	76	49.042	ENSHBUG00000017066	snrnp48	83	46.939	Haplochromis_burtoni
ENSCLAG00000003765	SNRNP48	99	94.970	ENSHGLG00000015241	SNRNP48	100	94.690	Heterocephalus_glaber_female
ENSCLAG00000003765	SNRNP48	99	94.970	ENSHGLG00100010027	SNRNP48	100	94.690	Heterocephalus_glaber_male
ENSCLAG00000003765	SNRNP48	72	48.374	ENSHCOG00000014066	snrnp48	81	45.804	Hippocampus_comes
ENSCLAG00000003765	SNRNP48	100	92.625	ENSSTOG00000014635	SNRNP48	100	94.000	Ictidomys_tridecemlineatus
ENSCLAG00000003765	SNRNP48	100	84.661	ENSJJAG00000011495	Snrnp48	100	84.661	Jaculus_jaculus
ENSCLAG00000003765	SNRNP48	87	46.128	ENSKMAG00000016514	snrnp48	80	46.263	Kryptolebias_marmoratus
ENSCLAG00000003765	SNRNP48	81	49.104	ENSLBEG00000026249	snrnp48	97	44.092	Labrus_bergylta
ENSCLAG00000003765	SNRNP48	98	52.819	ENSLACG00000003958	SNRNP48	99	51.594	Latimeria_chalumnae
ENSCLAG00000003765	SNRNP48	83	52.941	ENSLOCG00000004187	snrnp48	95	49.852	Lepisosteus_oculatus
ENSCLAG00000003765	SNRNP48	100	85.841	ENSLAFG00000011152	SNRNP48	100	85.841	Loxodonta_africana
ENSCLAG00000003765	SNRNP48	100	90.855	ENSMFAG00000045216	SNRNP48	100	90.855	Macaca_fascicularis
ENSCLAG00000003765	SNRNP48	100	90.855	ENSMMUG00000014785	SNRNP48	100	90.855	Macaca_mulatta
ENSCLAG00000003765	SNRNP48	100	90.560	ENSMNEG00000042269	SNRNP48	100	90.560	Macaca_nemestrina
ENSCLAG00000003765	SNRNP48	100	90.855	ENSMLEG00000034004	SNRNP48	100	90.855	Mandrillus_leucophaeus
ENSCLAG00000003765	SNRNP48	76	47.909	ENSMAMG00000018673	snrnp48	71	47.331	Mastacembelus_armatus
ENSCLAG00000003765	SNRNP48	83	67.466	ENSMGAG00000006037	SNRNP48	99	66.781	Meleagris_gallopavo
ENSCLAG00000003765	SNRNP48	100	87.611	ENSMAUG00000011944	Snrnp48	100	86.726	Mesocricetus_auratus
ENSCLAG00000003765	SNRNP48	100	87.611	ENSMICG00000012497	SNRNP48	100	87.611	Microcebus_murinus
ENSCLAG00000003765	SNRNP48	100	87.316	ENSMOCG00000015555	Snrnp48	100	86.431	Microtus_ochrogaster
ENSCLAG00000003765	SNRNP48	54	53.514	ENSMMOG00000003072	-	58	53.514	Mola_mola
ENSCLAG00000003765	SNRNP48	98	69.767	ENSMODG00000009996	SNRNP48	93	69.186	Monodelphis_domestica
ENSCLAG00000003765	SNRNP48	74	51.181	ENSMALG00000005725	snrnp48	82	47.183	Monopterus_albus
ENSCLAG00000003765	SNRNP48	100	87.316	MGP_CAROLIEiJ_G0018441	Snrnp48	100	86.431	Mus_caroli
ENSCLAG00000003765	SNRNP48	100	86.431	ENSMUSG00000021431	Snrnp48	100	85.546	Mus_musculus
ENSCLAG00000003765	SNRNP48	100	87.021	MGP_PahariEiJ_G0019509	Snrnp48	100	86.136	Mus_pahari
ENSCLAG00000003765	SNRNP48	100	85.841	MGP_SPRETEiJ_G0019321	Snrnp48	100	84.956	Mus_spretus
ENSCLAG00000003765	SNRNP48	99	86.686	ENSNGAG00000004849	Snrnp48	99	86.686	Nannospalax_galili
ENSCLAG00000003765	SNRNP48	98	44.477	ENSNBRG00000012127	snrnp48	97	41.127	Neolamprologus_brichardi
ENSCLAG00000003765	SNRNP48	100	90.855	ENSNLEG00000011667	SNRNP48	100	90.855	Nomascus_leucogenys
ENSCLAG00000003765	SNRNP48	95	78.638	ENSOPRG00000015471	SNRNP48	100	78.328	Ochotona_princeps
ENSCLAG00000003765	SNRNP48	96	45.317	ENSONIG00000001520	snrnp48	96	41.643	Oreochromis_niloticus
ENSCLAG00000003765	SNRNP48	60	60.000	ENSOANG00000019888	-	100	63.942	Ornithorhynchus_anatinus
ENSCLAG00000003765	SNRNP48	84	88.112	ENSOCUG00000005168	SNRNP48	100	87.500	Oryctolagus_cuniculus
ENSCLAG00000003765	SNRNP48	87	47.855	ENSORLG00000015654	snrnp48	81	48.421	Oryzias_latipes
ENSCLAG00000003765	SNRNP48	87	46.865	ENSORLG00020015976	snrnp48	69	47.719	Oryzias_latipes_hni
ENSCLAG00000003765	SNRNP48	87	47.855	ENSORLG00015022379	snrnp48	69	48.772	Oryzias_latipes_hsok
ENSCLAG00000003765	SNRNP48	82	47.535	ENSOMEG00000022007	snrnp48	81	47.887	Oryzias_melastigma
ENSCLAG00000003765	SNRNP48	92	86.817	ENSOGAG00000005275	SNRNP48	96	87.066	Otolemur_garnettii
ENSCLAG00000003765	SNRNP48	84	87.063	ENSOARG00000017319	SNRNP48	99	87.279	Ovis_aries
ENSCLAG00000003765	SNRNP48	100	90.855	ENSPPAG00000032873	SNRNP48	100	90.855	Pan_paniscus
ENSCLAG00000003765	SNRNP48	100	88.791	ENSPPRG00000004283	SNRNP48	100	88.791	Panthera_pardus
ENSCLAG00000003765	SNRNP48	84	90.210	ENSPTIG00000013502	SNRNP48	99	90.459	Panthera_tigris_altaica
ENSCLAG00000003765	SNRNP48	100	90.855	ENSPTRG00000017703	SNRNP48	100	90.855	Pan_troglodytes
ENSCLAG00000003765	SNRNP48	100	90.855	ENSPANG00000000771	SNRNP48	100	90.855	Papio_anubis
ENSCLAG00000003765	SNRNP48	94	46.131	ENSPKIG00000013703	snrnp48	59	49.825	Paramormyrops_kingsleyae
ENSCLAG00000003765	SNRNP48	84	63.000	ENSPSIG00000002213	SNRNP48	92	63.481	Pelodiscus_sinensis
ENSCLAG00000003765	SNRNP48	75	48.649	ENSPMGG00000008120	snrnp48	90	48.249	Periophthalmus_magnuspinnatus
ENSCLAG00000003765	SNRNP48	100	87.316	ENSPEMG00000008872	Snrnp48	100	86.431	Peromyscus_maniculatus_bairdii
ENSCLAG00000003765	SNRNP48	95	45.122	ENSPFOG00000003578	snrnp48	93	44.970	Poecilia_formosa
ENSCLAG00000003765	SNRNP48	68	50.427	ENSPLAG00000002290	snrnp48	79	50.427	Poecilia_latipinna
ENSCLAG00000003765	SNRNP48	95	44.512	ENSPMEG00000018033	snrnp48	93	44.379	Poecilia_mexicana
ENSCLAG00000003765	SNRNP48	73	50.598	ENSPREG00000018541	snrnp48	80	48.936	Poecilia_reticulata
ENSCLAG00000003765	SNRNP48	100	89.676	ENSPPYG00000016209	SNRNP48	100	89.676	Pongo_abelii
ENSCLAG00000003765	SNRNP48	79	69.663	ENSPCAG00000011991	SNRNP48	99	69.663	Procavia_capensis
ENSCLAG00000003765	SNRNP48	100	87.021	ENSPVAG00000002854	SNRNP48	100	87.021	Pteropus_vampyrus
ENSCLAG00000003765	SNRNP48	76	49.425	ENSPNYG00000015399	snrnp48	92	47.279	Pundamilia_nyererei
ENSCLAG00000003765	SNRNP48	100	87.316	ENSRNOG00000013756	Snrnp48	100	86.431	Rattus_norvegicus
ENSCLAG00000003765	SNRNP48	91	90.000	ENSRBIG00000043856	SNRNP48	97	90.461	Rhinopithecus_bieti
ENSCLAG00000003765	SNRNP48	100	90.560	ENSRROG00000043229	SNRNP48	100	90.560	Rhinopithecus_roxellana
ENSCLAG00000003765	SNRNP48	100	90.560	ENSSBOG00000019486	SNRNP48	100	90.560	Saimiri_boliviensis_boliviensis
ENSCLAG00000003765	SNRNP48	98	71.014	ENSSHAG00000014483	SNRNP48	99	71.014	Sarcophilus_harrisii
ENSCLAG00000003765	SNRNP48	74	51.562	ENSSFOG00015006610	snrnp48	70	48.136	Scleropages_formosus
ENSCLAG00000003765	SNRNP48	88	47.541	ENSSDUG00000014953	snrnp48	97	42.899	Seriola_dumerili
ENSCLAG00000003765	SNRNP48	84	47.586	ENSSLDG00000005989	snrnp48	92	43.293	Seriola_lalandi_dorsalis
ENSCLAG00000003765	SNRNP48	83	64.189	ENSSPUG00000006257	SNRNP48	84	64.164	Sphenodon_punctatus
ENSCLAG00000003765	SNRNP48	81	46.831	ENSSPAG00000006454	snrnp48	80	47.857	Stegastes_partitus
ENSCLAG00000003765	SNRNP48	83	65.292	ENSTGUG00000007575	SNRNP48	92	65.972	Taeniopygia_guttata
ENSCLAG00000003765	SNRNP48	71	50.617	ENSTRUG00000007031	snrnp48	73	50.794	Takifugu_rubripes
ENSCLAG00000003765	SNRNP48	91	42.628	ENSTNIG00000012977	-	76	46.875	Tetraodon_nigroviridis
ENSCLAG00000003765	SNRNP48	100	72.861	ENSTBEG00000015620	SNRNP48	100	72.861	Tupaia_belangeri
ENSCLAG00000003765	SNRNP48	100	85.841	ENSTTRG00000016715	SNRNP48	100	85.841	Tursiops_truncatus
ENSCLAG00000003765	SNRNP48	100	88.496	ENSUAMG00000003690	SNRNP48	100	87.611	Ursus_americanus
ENSCLAG00000003765	SNRNP48	84	86.014	ENSVPAG00000003557	SNRNP48	99	85.866	Vicugna_pacos
ENSCLAG00000003765	SNRNP48	99	87.798	ENSVVUG00000004996	SNRNP48	99	87.798	Vulpes_vulpes
ENSCLAG00000003765	SNRNP48	86	53.000	ENSXETG00000020447	snrnp48	97	50.448	Xenopus_tropicalis
ENSCLAG00000003765	SNRNP48	69	49.787	ENSXCOG00000004478	snrnp48	69	51.304	Xiphophorus_couchianus
ENSCLAG00000003765	SNRNP48	83	48.944	ENSXMAG00000013595	snrnp48	81	45.399	Xiphophorus_maculatus