EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000003854 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 57724 bases
Position: chrJH721988.1:220449-278172
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005438	PRP1_N	PF06424.12	1.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005535	PRPF6-201	2766	-	ENSCLAP00000005438	921 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000003854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003854	PRPF6	100	94.049	ENSG00000101161	PRPF6	100	94.049	Homo_sapiens
ENSCLAG00000003854	PRPF6	100	89.373	ENSAPOG00000010395	prpf6	96	89.798	Acanthochromis_polyacanthus
ENSCLAG00000003854	PRPF6	100	93.631	ENSAMEG00000001916	PRPF6	99	93.631	Ailuropoda_melanoleuca
ENSCLAG00000003854	PRPF6	100	89.160	ENSACIG00000019862	prpf6	96	89.586	Amphilophus_citrinellus
ENSCLAG00000003854	PRPF6	100	89.267	ENSAOCG00000012988	prpf6	96	89.692	Amphiprion_ocellaris
ENSCLAG00000003854	PRPF6	100	82.784	ENSAPEG00000008301	prpf6	100	83.103	Amphiprion_percula
ENSCLAG00000003854	PRPF6	100	88.948	ENSATEG00000005581	prpf6	96	89.373	Anabas_testudineus
ENSCLAG00000003854	PRPF6	100	94.261	ENSACAG00000006464	PRPF6	95	94.261	Anolis_carolinensis
ENSCLAG00000003854	PRPF6	100	94.155	ENSANAG00000012661	PRPF6	100	94.346	Aotus_nancymaae
ENSCLAG00000003854	PRPF6	100	89.267	ENSACLG00000025875	prpf6	96	89.692	Astatotilapia_calliptera
ENSCLAG00000003854	PRPF6	99	89.468	ENSAMXG00000001929	prpf6	96	89.894	Astyanax_mexicanus
ENSCLAG00000003854	PRPF6	100	95.396	ENSBTAG00000011656	PRPF6	100	95.396	Bos_taurus
ENSCLAG00000003854	PRPF6	100	94.155	ENSCJAG00000010616	PRPF6	100	94.155	Callithrix_jacchus
ENSCLAG00000003854	PRPF6	100	94.687	ENSCAFG00000013165	PRPF6	100	94.687	Canis_familiaris
ENSCLAG00000003854	PRPF6	100	94.687	ENSCAFG00020002050	PRPF6	100	94.687	Canis_lupus_dingo
ENSCLAG00000003854	PRPF6	100	94.474	ENSCHIG00000018187	PRPF6	100	94.474	Capra_hircus
ENSCLAG00000003854	PRPF6	100	94.793	ENSTSYG00000007814	PRPF6	100	94.793	Carlito_syrichta
ENSCLAG00000003854	PRPF6	97	94.547	ENSCAPG00000015077	PRPF6	100	94.547	Cavia_aperea
ENSCLAG00000003854	PRPF6	100	95.962	ENSCPOG00000007518	PRPF6	100	95.962	Cavia_porcellus
ENSCLAG00000003854	PRPF6	100	90.967	ENSCCAG00000024564	PRPF6	100	90.967	Cebus_capucinus
ENSCLAG00000003854	PRPF6	100	93.943	ENSCATG00000037473	PRPF6	100	93.943	Cercocebus_atys
ENSCLAG00000003854	PRPF6	100	88.912	ENSCSAG00000016742	PRPF6	100	88.912	Chlorocebus_sabaeus
ENSCLAG00000003854	PRPF6	84	75.081	ENSCHOG00000003315	-	98	74.669	Choloepus_hoffmanni
ENSCLAG00000003854	PRPF6	100	94.580	ENSCPBG00000013964	PRPF6	96	94.580	Chrysemys_picta_bellii
ENSCLAG00000003854	PRPF6	99	70.930	ENSCING00000008817	-	99	70.930	Ciona_intestinalis
ENSCLAG00000003854	PRPF6	100	93.943	ENSCANG00000038230	PRPF6	100	93.943	Colobus_angolensis_palliatus
ENSCLAG00000003854	PRPF6	100	95.537	ENSCGRG00001022666	Prpf6	100	95.537	Cricetulus_griseus_chok1gshd
ENSCLAG00000003854	PRPF6	100	83.741	ENSCSEG00000018561	prpf6	100	84.166	Cynoglossus_semilaevis
ENSCLAG00000003854	PRPF6	100	89.373	ENSCVAG00000010550	prpf6	96	89.904	Cyprinodon_variegatus
ENSCLAG00000003854	PRPF6	100	89.373	ENSDARG00000091367	prpf6	99	89.798	Danio_rerio
ENSCLAG00000003854	PRPF6	100	93.836	ENSDNOG00000040544	PRPF6	100	93.836	Dasypus_novemcinctus
ENSCLAG00000003854	PRPF6	91	94.179	ENSDORG00000005406	Prpf6	100	94.179	Dipodomys_ordii
ENSCLAG00000003854	PRPF6	99	69.957	FBgn0036828	CG6841	98	70.386	Drosophila_melanogaster
ENSCLAG00000003854	PRPF6	85	90.789	ENSETEG00000004447	PRPF6	85	90.789	Echinops_telfairi
ENSCLAG00000003854	PRPF6	99	83.987	ENSEBUG00000008835	prpf6	99	83.987	Eptatretus_burgeri
ENSCLAG00000003854	PRPF6	100	94.687	ENSEASG00005023115	PRPF6	100	94.687	Equus_asinus_asinus
ENSCLAG00000003854	PRPF6	100	88.098	ENSECAG00000013983	PRPF6	100	90.436	Equus_caballus
ENSCLAG00000003854	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	79	100.000	Erinaceus_europaeus
ENSCLAG00000003854	PRPF6	100	87.991	ENSELUG00000001945	prpf6	93	87.991	Esox_lucius
ENSCLAG00000003854	PRPF6	100	94.687	ENSFCAG00000001183	PRPF6	100	94.687	Felis_catus
ENSCLAG00000003854	PRPF6	100	94.474	ENSFALG00000010326	-	97	94.474	Ficedula_albicollis
ENSCLAG00000003854	PRPF6	100	87.141	ENSFALG00000006046	-	97	87.141	Ficedula_albicollis
ENSCLAG00000003854	PRPF6	100	94.474	ENSFDAG00000006451	PRPF6	100	95.692	Fukomys_damarensis
ENSCLAG00000003854	PRPF6	100	89.904	ENSFHEG00000000560	prpf6	96	89.904	Fundulus_heteroclitus
ENSCLAG00000003854	PRPF6	100	86.152	ENSGMOG00000015622	prpf6	99	86.152	Gadus_morhua
ENSCLAG00000003854	PRPF6	100	94.261	ENSGALG00000006001	PRPF6	100	94.261	Gallus_gallus
ENSCLAG00000003854	PRPF6	100	84.803	ENSGAFG00000021109	prpf6	96	85.228	Gambusia_affinis
ENSCLAG00000003854	PRPF6	100	88.098	ENSGACG00000002576	prpf6	99	88.098	Gasterosteus_aculeatus
ENSCLAG00000003854	PRPF6	100	94.474	ENSGAGG00000008653	PRPF6	96	94.474	Gopherus_agassizii
ENSCLAG00000003854	PRPF6	100	94.049	ENSGGOG00000016876	PRPF6	100	94.049	Gorilla_gorilla
ENSCLAG00000003854	PRPF6	100	89.267	ENSHBUG00000004496	prpf6	96	89.692	Haplochromis_burtoni
ENSCLAG00000003854	PRPF6	100	95.749	ENSHGLG00000009222	PRPF6	100	95.749	Heterocephalus_glaber_female
ENSCLAG00000003854	PRPF6	97	95.638	ENSHGLG00100016600	PRPF6	100	95.638	Heterocephalus_glaber_male
ENSCLAG00000003854	PRPF6	100	88.098	ENSHCOG00000011513	prpf6	96	88.523	Hippocampus_comes
ENSCLAG00000003854	PRPF6	100	90.117	ENSIPUG00000004912	prpf6	96	90.117	Ictalurus_punctatus
ENSCLAG00000003854	PRPF6	100	92.994	ENSSTOG00000002922	PRPF6	100	92.781	Ictidomys_tridecemlineatus
ENSCLAG00000003854	PRPF6	100	95.749	ENSJJAG00000000836	Prpf6	100	95.749	Jaculus_jaculus
ENSCLAG00000003854	PRPF6	100	88.735	ENSKMAG00000017800	prpf6	96	89.160	Kryptolebias_marmoratus
ENSCLAG00000003854	PRPF6	100	88.523	ENSLBEG00000012582	prpf6	96	88.523	Labrus_bergylta
ENSCLAG00000003854	PRPF6	100	91.180	ENSLOCG00000004827	prpf6	96	90.223	Lepisosteus_oculatus
ENSCLAG00000003854	PRPF6	100	93.943	ENSLAFG00000005272	PRPF6	100	93.943	Loxodonta_africana
ENSCLAG00000003854	PRPF6	100	93.943	ENSMFAG00000037542	PRPF6	100	93.943	Macaca_fascicularis
ENSCLAG00000003854	PRPF6	100	87.367	ENSMMUG00000015558	PRPF6	98	93.068	Macaca_mulatta
ENSCLAG00000003854	PRPF6	100	80.021	ENSMNEG00000045555	PRPF6	100	80.021	Macaca_nemestrina
ENSCLAG00000003854	PRPF6	100	89.054	ENSMAMG00000010718	prpf6	96	89.479	Mastacembelus_armatus
ENSCLAG00000003854	PRPF6	100	88.747	ENSMZEG00005015261	-	99	89.172	Maylandia_zebra
ENSCLAG00000003854	PRPF6	94	88.549	ENSMZEG00005026539	prpf6	100	89.002	Maylandia_zebra
ENSCLAG00000003854	PRPF6	97	94.329	ENSMGAG00000006634	PRPF6	100	94.329	Meleagris_gallopavo
ENSCLAG00000003854	PRPF6	100	95.643	ENSMAUG00000013969	Prpf6	100	95.643	Mesocricetus_auratus
ENSCLAG00000003854	PRPF6	87	93.674	ENSMICG00000017793	PRPF6	98	93.588	Microcebus_murinus
ENSCLAG00000003854	PRPF6	100	95.537	ENSMOCG00000001701	Prpf6	100	95.537	Microtus_ochrogaster
ENSCLAG00000003854	PRPF6	100	88.098	ENSMMOG00000020419	prpf6	100	88.523	Mola_mola
ENSCLAG00000003854	PRPF6	99	94.451	ENSMODG00000017051	PRPF6	99	94.451	Monodelphis_domestica
ENSCLAG00000003854	PRPF6	99	89.259	ENSMALG00000000089	prpf6	100	89.259	Monopterus_albus
ENSCLAG00000003854	PRPF6	100	88.948	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSCLAG00000003854	PRPF6	100	95.643	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSCLAG00000003854	PRPF6	100	95.643	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSCLAG00000003854	PRPF6	100	95.643	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSCLAG00000003854	PRPF6	91	93.683	ENSMPUG00000008673	PRPF6	99	93.683	Mustela_putorius_furo
ENSCLAG00000003854	PRPF6	100	95.855	ENSNGAG00000003365	Prpf6	100	95.855	Nannospalax_galili
ENSCLAG00000003854	PRPF6	100	89.160	ENSNBRG00000015025	prpf6	96	89.586	Neolamprologus_brichardi
ENSCLAG00000003854	PRPF6	100	93.943	ENSNLEG00000010208	PRPF6	100	93.943	Nomascus_leucogenys
ENSCLAG00000003854	PRPF6	100	89.130	ENSMEUG00000009824	-	90	89.130	Notamacropus_eugenii
ENSCLAG00000003854	PRPF6	100	89.692	ENSODEG00000004841	PRPF6	100	89.692	Octodon_degus
ENSCLAG00000003854	PRPF6	100	88.948	ENSONIG00000017406	prpf6	96	89.479	Oreochromis_niloticus
ENSCLAG00000003854	PRPF6	100	94.687	ENSOANG00000004920	PRPF6	100	94.687	Ornithorhynchus_anatinus
ENSCLAG00000003854	PRPF6	99	93.026	ENSOCUG00000014151	PRPF6	100	93.026	Oryctolagus_cuniculus
ENSCLAG00000003854	PRPF6	100	88.735	ENSORLG00000009592	prpf6	96	88.735	Oryzias_latipes
ENSCLAG00000003854	PRPF6	100	88.842	ENSORLG00020001458	prpf6	96	88.842	Oryzias_latipes_hni
ENSCLAG00000003854	PRPF6	100	88.842	ENSORLG00015018762	prpf6	96	88.842	Oryzias_latipes_hsok
ENSCLAG00000003854	PRPF6	100	88.735	ENSOMEG00000012174	prpf6	96	89.160	Oryzias_melastigma
ENSCLAG00000003854	PRPF6	100	87.261	ENSOGAG00000007573	PRPF6	100	87.261	Otolemur_garnettii
ENSCLAG00000003854	PRPF6	100	94.049	ENSOARG00000008776	PRPF6	99	94.049	Ovis_aries
ENSCLAG00000003854	PRPF6	100	94.049	ENSPPAG00000008686	PRPF6	100	94.049	Pan_paniscus
ENSCLAG00000003854	PRPF6	100	94.580	ENSPPRG00000008497	PRPF6	100	94.580	Panthera_pardus
ENSCLAG00000003854	PRPF6	97	94.438	ENSPTIG00000011184	PRPF6	97	94.438	Panthera_tigris_altaica
ENSCLAG00000003854	PRPF6	100	94.049	ENSPTRG00000013765	PRPF6	100	94.049	Pan_troglodytes
ENSCLAG00000003854	PRPF6	100	93.624	ENSPANG00000024135	PRPF6	100	93.624	Papio_anubis
ENSCLAG00000003854	PRPF6	100	90.861	ENSPKIG00000005627	prpf6	99	91.286	Paramormyrops_kingsleyae
ENSCLAG00000003854	PRPF6	94	94.444	ENSPSIG00000007717	PRPF6	100	94.444	Pelodiscus_sinensis
ENSCLAG00000003854	PRPF6	100	86.412	ENSPMGG00000008925	prpf6	96	86.624	Periophthalmus_magnuspinnatus
ENSCLAG00000003854	PRPF6	100	95.537	ENSPEMG00000016036	Prpf6	100	95.537	Peromyscus_maniculatus_bairdii
ENSCLAG00000003854	PRPF6	99	84.803	ENSPMAG00000006144	prpf6	99	84.803	Petromyzon_marinus
ENSCLAG00000003854	PRPF6	100	94.793	ENSPCIG00000017909	PRPF6	100	94.793	Phascolarctos_cinereus
ENSCLAG00000003854	PRPF6	100	89.479	ENSPFOG00000006431	prpf6	96	89.904	Poecilia_formosa
ENSCLAG00000003854	PRPF6	100	89.373	ENSPLAG00000005974	prpf6	96	89.798	Poecilia_latipinna
ENSCLAG00000003854	PRPF6	100	89.586	ENSPMEG00000009977	prpf6	96	90.011	Poecilia_mexicana
ENSCLAG00000003854	PRPF6	100	89.479	ENSPREG00000017993	prpf6	92	89.904	Poecilia_reticulata
ENSCLAG00000003854	PRPF6	100	93.518	ENSPPYG00000011256	PRPF6	100	93.518	Pongo_abelii
ENSCLAG00000003854	PRPF6	95	98.230	ENSPCAG00000006536	PRPF6	88	98.230	Procavia_capensis
ENSCLAG00000003854	PRPF6	100	94.261	ENSPCOG00000016881	PRPF6	100	94.261	Propithecus_coquereli
ENSCLAG00000003854	PRPF6	100	90.011	ENSPVAG00000014316	PRPF6	100	90.011	Pteropus_vampyrus
ENSCLAG00000003854	PRPF6	100	72.824	ENSPNYG00000001939	prpf6	96	78.108	Pundamilia_nyererei
ENSCLAG00000003854	PRPF6	100	89.692	ENSPNAG00000015606	prpf6	96	90.117	Pygocentrus_nattereri
ENSCLAG00000003854	PRPF6	100	95.537	ENSRNOG00000051498	Prpf6	100	95.537	Rattus_norvegicus
ENSCLAG00000003854	PRPF6	100	93.943	ENSRBIG00000043613	PRPF6	100	93.943	Rhinopithecus_bieti
ENSCLAG00000003854	PRPF6	100	90.794	ENSRROG00000040969	PRPF6	100	90.794	Rhinopithecus_roxellana
ENSCLAG00000003854	PRPF6	91	88.319	ENSSBOG00000020632	PRPF6	91	88.319	Saimiri_boliviensis_boliviensis
ENSCLAG00000003854	PRPF6	100	94.793	ENSSHAG00000016810	PRPF6	100	94.793	Sarcophilus_harrisii
ENSCLAG00000003854	PRPF6	99	90.977	ENSSFOG00015020859	prpf6	100	91.407	Scleropages_formosus
ENSCLAG00000003854	PRPF6	100	88.735	ENSSMAG00000008112	prpf6	96	88.735	Scophthalmus_maximus
ENSCLAG00000003854	PRPF6	100	89.054	ENSSDUG00000016142	prpf6	96	89.479	Seriola_dumerili
ENSCLAG00000003854	PRPF6	100	88.948	ENSSLDG00000025283	prpf6	100	85.972	Seriola_lalandi_dorsalis
ENSCLAG00000003854	PRPF6	94	92.630	ENSSPUG00000018260	PRPF6	100	92.630	Sphenodon_punctatus
ENSCLAG00000003854	PRPF6	100	89.054	ENSSPAG00000015850	prpf6	96	89.586	Stegastes_partitus
ENSCLAG00000003854	PRPF6	100	94.580	ENSSSCG00000029119	PRPF6	100	94.218	Sus_scrofa
ENSCLAG00000003854	PRPF6	100	94.580	ENSTGUG00000007221	PRPF6	99	94.580	Taeniopygia_guttata
ENSCLAG00000003854	PRPF6	100	87.991	ENSTRUG00000002920	prpf6	96	88.417	Takifugu_rubripes
ENSCLAG00000003854	PRPF6	100	81.712	ENSTNIG00000017873	prpf6	100	82.135	Tetraodon_nigroviridis
ENSCLAG00000003854	PRPF6	88	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSCLAG00000003854	PRPF6	100	94.049	ENSTTRG00000013068	PRPF6	100	94.049	Tursiops_truncatus
ENSCLAG00000003854	PRPF6	98	93.043	ENSUMAG00000021631	PRPF6	98	93.043	Ursus_maritimus
ENSCLAG00000003854	PRPF6	100	94.687	ENSVVUG00000014948	PRPF6	100	94.687	Vulpes_vulpes
ENSCLAG00000003854	PRPF6	100	92.136	ENSXETG00000012054	prpf6	97	92.774	Xenopus_tropicalis
ENSCLAG00000003854	PRPF6	100	89.586	ENSXCOG00000008082	prpf6	96	90.011	Xiphophorus_couchianus
ENSCLAG00000003854	PRPF6	100	89.586	ENSXMAG00000015581	prpf6	96	90.011	Xiphophorus_maculatus