EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000003912 (Gene tree)
Gene ID: -
Gene Symbol: GTF3A
Alias: AP2|TFIIIA
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 8876 bases
Position: chrJH721957.1:6842960-6851835
Accession: 102015124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005518	zf-C2H2	PF00096.26	1.6e-36	1	7
ENSCLAP00000005518	zf-C2H2	PF00096.26	1.6e-36	2	7
ENSCLAP00000005518	zf-C2H2	PF00096.26	1.6e-36	3	7
ENSCLAP00000005518	zf-C2H2	PF00096.26	1.6e-36	4	7
ENSCLAP00000005518	zf-C2H2	PF00096.26	1.6e-36	5	7
ENSCLAP00000005518	zf-C2H2	PF00096.26	1.6e-36	6	7
ENSCLAP00000005518	zf-C2H2	PF00096.26	1.6e-36	7	7
ENSCLAP00000005518	zf-met	PF12874.7	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005619	GTF3A-201	984	XM_013505454	ENSCLAP00000005518	328 (aa)	XP_013360908	-

Gene Model

Click here to download ENSCLAG00000003912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000003912	GTF3A	86	34.259	ENSCLAG00000013368	ZNF652	52	34.259
ENSCLAG00000003912	GTF3A	83	37.647	ENSCLAG00000003116	ZNF2	66	33.984
ENSCLAG00000003912	GTF3A	86	35.714	ENSCLAG00000003065	ZNF226	68	35.714
ENSCLAG00000003912	GTF3A	87	32.069	ENSCLAG00000014648	-	73	33.579
ENSCLAG00000003912	GTF3A	80	37.828	ENSCLAG00000001377	-	74	37.828
ENSCLAG00000003912	GTF3A	84	38.028	ENSCLAG00000003483	ZNF112	63	38.028
ENSCLAG00000003912	GTF3A	82	39.506	ENSCLAG00000010195	-	73	39.506
ENSCLAG00000003912	GTF3A	80	36.757	ENSCLAG00000000758	-	60	36.757
ENSCLAG00000003912	GTF3A	90	33.969	ENSCLAG00000001537	ZNF81	63	33.969
ENSCLAG00000003912	GTF3A	81	40.000	ENSCLAG00000011533	ZNF768	50	36.310
ENSCLAG00000003912	GTF3A	86	38.889	ENSCLAG00000012556	-	72	42.593
ENSCLAG00000003912	GTF3A	83	30.576	ENSCLAG00000008329	ZFP64	63	30.263
ENSCLAG00000003912	GTF3A	79	34.459	ENSCLAG00000000250	ZNF550	56	34.459
ENSCLAG00000003912	GTF3A	79	34.310	ENSCLAG00000004223	ZFP1	62	37.063
ENSCLAG00000003912	GTF3A	82	38.938	ENSCLAG00000007793	ZNF236	53	36.585
ENSCLAG00000003912	GTF3A	85	35.238	ENSCLAG00000006252	ZNF574	61	34.711
ENSCLAG00000003912	GTF3A	88	33.562	ENSCLAG00000005392	PRDM5	74	32.491

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003912	GTF3A	93	86.184	ENSAMEG00000015824	GTF3A	85	85.209	Ailuropoda_melanoleuca
ENSCLAG00000003912	GTF3A	95	82.428	ENSBTAG00000012600	GTF3A	87	82.109	Bos_taurus
ENSCLAG00000003912	GTF3A	95	84.713	ENSCAFG00000006794	GTF3A	86	83.439	Canis_familiaris
ENSCLAG00000003912	GTF3A	95	82.748	ENSCHIG00000021040	-	74	81.150	Capra_hircus
ENSCLAG00000003912	GTF3A	95	82.428	ENSCHIG00000010341	-	87	80.831	Capra_hircus
ENSCLAG00000003912	GTF3A	84	85.091	ENSTSYG00000004206	GTF3A	81	86.029	Carlito_syrichta
ENSCLAG00000003912	GTF3A	88	88.095	ENSCAPG00000015862	GTF3A	98	88.095	Cavia_aperea
ENSCLAG00000003912	GTF3A	99	88.889	ENSCPOG00000010143	GTF3A	98	88.889	Cavia_porcellus
ENSCLAG00000003912	GTF3A	96	84.177	ENSDNOG00000037405	-	75	84.177	Dasypus_novemcinctus
ENSCLAG00000003912	GTF3A	95	84.270	ENSETEG00000003225	GTF3A	63	84.270	Echinops_telfairi
ENSCLAG00000003912	GTF3A	93	84.211	ENSEASG00005022495	-	69	83.280	Equus_asinus_asinus
ENSCLAG00000003912	GTF3A	94	72.258	ENSEASG00005013216	-	82	72.258	Equus_asinus_asinus
ENSCLAG00000003912	GTF3A	95	69.855	ENSECAG00000024825	-	64	80.727	Equus_caballus
ENSCLAG00000003912	GTF3A	93	85.197	ENSECAG00000014803	GTF3A	71	86.885	Equus_caballus
ENSCLAG00000003912	GTF3A	92	83.168	ENSEEUG00000004307	GTF3A	82	83.013	Erinaceus_europaeus
ENSCLAG00000003912	GTF3A	95	85.209	ENSFCAG00000006982	GTF3A	72	84.887	Felis_catus
ENSCLAG00000003912	GTF3A	98	89.164	ENSFDAG00000016841	GTF3A	99	89.164	Fukomys_damarensis
ENSCLAG00000003912	GTF3A	97	90.566	ENSHGLG00000004173	GTF3A	99	90.566	Heterocephalus_glaber_female
ENSCLAG00000003912	GTF3A	97	90.566	ENSHGLG00100011561	GTF3A	99	90.566	Heterocephalus_glaber_male
ENSCLAG00000003912	GTF3A	95	88.179	ENSSTOG00000013853	GTF3A	100	88.179	Ictidomys_tridecemlineatus
ENSCLAG00000003912	GTF3A	84	82.625	ENSJJAG00000011501	Gtf3a	96	77.358	Jaculus_jaculus
ENSCLAG00000003912	GTF3A	95	77.848	ENSLAFG00000027315	GTF3A	85	77.848	Loxodonta_africana
ENSCLAG00000003912	GTF3A	95	83.280	ENSMAUG00000016253	Gtf3a	84	81.672	Mesocricetus_auratus
ENSCLAG00000003912	GTF3A	93	85.855	ENSMICG00000014763	GTF3A	84	86.174	Microcebus_murinus
ENSCLAG00000003912	GTF3A	96	82.803	MGP_CAROLIEiJ_G0028031	Gtf3a	95	78.899	Mus_caroli
ENSCLAG00000003912	GTF3A	96	82.803	ENSMUSG00000016503	Gtf3a	95	78.899	Mus_musculus
ENSCLAG00000003912	GTF3A	96	81.905	MGP_PahariEiJ_G0024597	Gtf3a	92	80.317	Mus_pahari
ENSCLAG00000003912	GTF3A	96	82.803	MGP_SPRETEiJ_G0029029	Gtf3a	95	78.899	Mus_spretus
ENSCLAG00000003912	GTF3A	93	86.184	ENSMPUG00000005835	GTF3A	84	85.531	Mustela_putorius_furo
ENSCLAG00000003912	GTF3A	92	85.714	ENSMLUG00000002158	GTF3A	94	83.654	Myotis_lucifugus
ENSCLAG00000003912	GTF3A	93	87.829	ENSNLEG00000000331	GTF3A	85	88.103	Nomascus_leucogenys
ENSCLAG00000003912	GTF3A	93	55.844	ENSMEUG00000010089	GTF3A	86	57.388	Notamacropus_eugenii
ENSCLAG00000003912	GTF3A	95	77.814	ENSOPRG00000000854	-	78	77.170	Ochotona_princeps
ENSCLAG00000003912	GTF3A	95	91.318	ENSODEG00000006725	GTF3A	73	91.318	Octodon_degus
ENSCLAG00000003912	GTF3A	95	84.345	ENSOCUG00000011713	GTF3A	71	84.026	Oryctolagus_cuniculus
ENSCLAG00000003912	GTF3A	93	85.197	ENSOGAG00000014589	GTF3A	85	85.209	Otolemur_garnettii
ENSCLAG00000003912	GTF3A	95	77.316	ENSOARG00000012551	GTF3A	86	75.719	Ovis_aries
ENSCLAG00000003912	GTF3A	95	86.817	ENSPPRG00000002368	GTF3A	85	85.531	Panthera_pardus
ENSCLAG00000003912	GTF3A	84	87.295	ENSPTIG00000018958	GTF3A	67	87.295	Panthera_tigris_altaica
ENSCLAG00000003912	GTF3A	84	54.067	ENSPSIG00000011722	GTF3A	75	54.067	Pelodiscus_sinensis
ENSCLAG00000003912	GTF3A	91	87.584	ENSPPYG00000005235	GTF3A	85	87.869	Pongo_abelii
ENSCLAG00000003912	GTF3A	93	84.590	ENSPCOG00000016742	GTF3A	70	84.566	Propithecus_coquereli
ENSCLAG00000003912	GTF3A	95	83.923	ENSPVAG00000012837	GTF3A	73	82.958	Pteropus_vampyrus
ENSCLAG00000003912	GTF3A	93	79.605	ENSRROG00000043264	GTF3A	84	80.064	Rhinopithecus_roxellana
ENSCLAG00000003912	GTF3A	88	77.816	ENSSHAG00000016965	GTF3A	83	78.351	Sarcophilus_harrisii
ENSCLAG00000003912	GTF3A	95	75.884	ENSSARG00000010692	GTF3A	86	75.884	Sorex_araneus
ENSCLAG00000003912	GTF3A	89	70.748	ENSSPUG00000005307	GTF3A	74	73.551	Sphenodon_punctatus
ENSCLAG00000003912	GTF3A	93	45.603	ENSTRUG00000005241	gtf3ab	88	45.338	Takifugu_rubripes
ENSCLAG00000003912	GTF3A	85	86.290	ENSTBEG00000012075	GTF3A	59	86.290	Tupaia_belangeri
ENSCLAG00000003912	GTF3A	95	77.814	ENSTTRG00000008538	GTF3A	75	77.492	Tursiops_truncatus
ENSCLAG00000003912	GTF3A	93	87.171	ENSUAMG00000019189	GTF3A	85	86.174	Ursus_americanus
ENSCLAG00000003912	GTF3A	92	85.809	ENSUMAG00000016941	GTF3A	100	84.488	Ursus_maritimus
ENSCLAG00000003912	GTF3A	81	87.342	ENSVPAG00000004995	GTF3A	83	86.694	Vicugna_pacos
ENSCLAG00000003912	GTF3A	95	83.758	ENSVVUG00000009197	GTF3A	86	82.484	Vulpes_vulpes