EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000003921 (Gene tree)
Gene ID: 102004819
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 49807 bases
Position: chrJH721944.1:3307794-3357600
Accession: 102004819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005531	CPSF_A	PF03178.15	2.1e-102	1	1
ENSCLAP00000005530	CPSF_A	PF03178.15	2.3e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005631	SF3B3-201	4422	XM_005403485	ENSCLAP00000005530	1217 (aa)	XP_005403542	UPI0000167878
ENSCLAT00000005632	SF3B3-202	3561	-	ENSCLAP00000005531	1186 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000003921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003921	SF3B3	100	100.000	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSCLAG00000003921	SF3B3	96	93.510	ENSAPOG00000006172	sf3b3	98	93.510	Acanthochromis_polyacanthus
ENSCLAG00000003921	SF3B3	100	99.672	ENSAMEG00000002187	SF3B3	100	99.672	Ailuropoda_melanoleuca
ENSCLAG00000003921	SF3B3	92	90.625	ENSACIG00000016487	sf3b3	100	90.625	Amphilophus_citrinellus
ENSCLAG00000003921	SF3B3	100	93.426	ENSAOCG00000007158	sf3b3	100	93.426	Amphiprion_ocellaris
ENSCLAG00000003921	SF3B3	100	93.426	ENSAPEG00000022786	sf3b3	100	93.426	Amphiprion_percula
ENSCLAG00000003921	SF3B3	100	93.509	ENSATEG00000013708	sf3b3	100	93.509	Anabas_testudineus
ENSCLAG00000003921	SF3B3	81	98.176	ENSAPLG00000004996	SF3B3	100	98.176	Anas_platyrhynchos
ENSCLAG00000003921	SF3B3	100	98.603	ENSACAG00000001817	SF3B3	100	98.603	Anolis_carolinensis
ENSCLAG00000003921	SF3B3	100	100.000	ENSANAG00000028001	SF3B3	100	100.000	Aotus_nancymaae
ENSCLAG00000003921	SF3B3	96	93.168	ENSACLG00000022555	sf3b3	98	93.168	Astatotilapia_calliptera
ENSCLAG00000003921	SF3B3	100	93.180	ENSAMXG00000003410	sf3b3	100	93.180	Astyanax_mexicanus
ENSCLAG00000003921	SF3B3	100	100.000	ENSBTAG00000010627	SF3B3	100	100.000	Bos_taurus
ENSCLAG00000003921	SF3B3	100	60.618	WBGene00019323	teg-4	100	60.618	Caenorhabditis_elegans
ENSCLAG00000003921	SF3B3	100	100.000	ENSCJAG00000014773	SF3B3	99	100.000	Callithrix_jacchus
ENSCLAG00000003921	SF3B3	100	99.918	ENSCAFG00000020151	SF3B3	100	99.918	Canis_familiaris
ENSCLAG00000003921	SF3B3	100	99.918	ENSCAFG00020020912	SF3B3	100	99.918	Canis_lupus_dingo
ENSCLAG00000003921	SF3B3	100	99.918	ENSCHIG00000019822	SF3B3	100	99.918	Capra_hircus
ENSCLAG00000003921	SF3B3	100	100.000	ENSTSYG00000007910	SF3B3	100	100.000	Carlito_syrichta
ENSCLAG00000003921	SF3B3	84	89.016	ENSCAPG00000001484	SF3B3	92	89.016	Cavia_aperea
ENSCLAG00000003921	SF3B3	100	98.685	ENSCPOG00000000586	SF3B3	100	98.685	Cavia_porcellus
ENSCLAG00000003921	SF3B3	100	100.000	ENSCCAG00000017736	SF3B3	100	100.000	Cebus_capucinus
ENSCLAG00000003921	SF3B3	100	100.000	ENSCATG00000036562	SF3B3	100	100.000	Cercocebus_atys
ENSCLAG00000003921	SF3B3	100	99.918	ENSCSAG00000004371	SF3B3	100	99.918	Chlorocebus_sabaeus
ENSCLAG00000003921	SF3B3	90	92.835	ENSCHOG00000001878	SF3B3	90	92.835	Choloepus_hoffmanni
ENSCLAG00000003921	SF3B3	100	98.850	ENSCPBG00000015853	SF3B3	100	98.850	Chrysemys_picta_bellii
ENSCLAG00000003921	SF3B3	100	80.788	ENSCING00000001342	-	100	80.788	Ciona_intestinalis
ENSCLAG00000003921	SF3B3	99	79.475	ENSCSAVG00000011454	-	100	79.475	Ciona_savignyi
ENSCLAG00000003921	SF3B3	100	96.713	ENSCANG00000042920	SF3B3	100	96.713	Colobus_angolensis_palliatus
ENSCLAG00000003921	SF3B3	100	99.918	ENSCGRG00001015908	Sf3b3	100	99.918	Cricetulus_griseus_chok1gshd
ENSCLAG00000003921	SF3B3	100	99.918	ENSCGRG00000010180	Sf3b3	100	99.918	Cricetulus_griseus_crigri
ENSCLAG00000003921	SF3B3	82	92.515	ENSCSEG00000014192	sf3b3	99	92.515	Cynoglossus_semilaevis
ENSCLAG00000003921	SF3B3	100	92.605	ENSCVAG00000010459	sf3b3	100	92.605	Cyprinodon_variegatus
ENSCLAG00000003921	SF3B3	100	93.426	ENSDARG00000103553	sf3b3	100	93.426	Danio_rerio
ENSCLAG00000003921	SF3B3	85	100.000	ENSDNOG00000043626	SF3B3	100	100.000	Dasypus_novemcinctus
ENSCLAG00000003921	SF3B3	100	100.000	ENSDORG00000014176	Sf3b3	100	100.000	Dipodomys_ordii
ENSCLAG00000003921	SF3B3	100	75.143	FBgn0035162	Sf3b3	100	75.143	Drosophila_melanogaster
ENSCLAG00000003921	SF3B3	85	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSCLAG00000003921	SF3B3	100	87.757	ENSEBUG00000006117	sf3b3	100	87.757	Eptatretus_burgeri
ENSCLAG00000003921	SF3B3	100	99.918	ENSEASG00005013376	SF3B3	100	99.918	Equus_asinus_asinus
ENSCLAG00000003921	SF3B3	100	99.918	ENSECAG00000014053	SF3B3	100	99.918	Equus_caballus
ENSCLAG00000003921	SF3B3	93	99.643	ENSEEUG00000015611	SF3B3	93	99.643	Erinaceus_europaeus
ENSCLAG00000003921	SF3B3	100	91.393	ENSELUG00000015417	sf3b3	100	91.393	Esox_lucius
ENSCLAG00000003921	SF3B3	100	99.918	ENSFCAG00000009487	SF3B3	100	99.918	Felis_catus
ENSCLAG00000003921	SF3B3	100	98.932	ENSFALG00000007372	SF3B3	100	98.932	Ficedula_albicollis
ENSCLAG00000003921	SF3B3	100	99.918	ENSFDAG00000002608	SF3B3	100	99.918	Fukomys_damarensis
ENSCLAG00000003921	SF3B3	100	93.016	ENSFHEG00000017824	sf3b3	100	93.016	Fundulus_heteroclitus
ENSCLAG00000003921	SF3B3	100	89.409	ENSGMOG00000008139	sf3b3	100	89.409	Gadus_morhua
ENSCLAG00000003921	SF3B3	100	99.178	ENSGALG00000002531	SF3B3	100	99.178	Gallus_gallus
ENSCLAG00000003921	SF3B3	100	92.605	ENSGAFG00000015206	sf3b3	100	92.605	Gambusia_affinis
ENSCLAG00000003921	SF3B3	100	93.021	ENSGACG00000002646	sf3b3	100	93.021	Gasterosteus_aculeatus
ENSCLAG00000003921	SF3B3	96	98.890	ENSGAGG00000006746	SF3B3	97	98.890	Gopherus_agassizii
ENSCLAG00000003921	SF3B3	100	100.000	ENSGGOG00000003246	SF3B3	100	100.000	Gorilla_gorilla
ENSCLAG00000003921	SF3B3	92	85.714	ENSHBUG00000005960	sf3b3	100	86.875	Haplochromis_burtoni
ENSCLAG00000003921	SF3B3	100	100.000	ENSHGLG00000010135	SF3B3	100	100.000	Heterocephalus_glaber_female
ENSCLAG00000003921	SF3B3	100	97.810	ENSHGLG00100011148	SF3B3	100	97.810	Heterocephalus_glaber_male
ENSCLAG00000003921	SF3B3	100	92.687	ENSHCOG00000011981	sf3b3	100	92.687	Hippocampus_comes
ENSCLAG00000003921	SF3B3	100	93.098	ENSIPUG00000020435	sf3b3	100	93.098	Ictalurus_punctatus
ENSCLAG00000003921	SF3B3	100	100.000	ENSSTOG00000007065	SF3B3	100	100.000	Ictidomys_tridecemlineatus
ENSCLAG00000003921	SF3B3	100	100.000	ENSJJAG00000003948	Sf3b3	100	100.000	Jaculus_jaculus
ENSCLAG00000003921	SF3B3	100	90.797	ENSKMAG00000004066	sf3b3	99	92.997	Kryptolebias_marmoratus
ENSCLAG00000003921	SF3B3	100	92.933	ENSLBEG00000018302	sf3b3	100	92.933	Labrus_bergylta
ENSCLAG00000003921	SF3B3	98	92.276	ENSLACG00000012501	SF3B3	99	92.276	Latimeria_chalumnae
ENSCLAG00000003921	SF3B3	100	94.089	ENSLOCG00000007566	sf3b3	100	94.089	Lepisosteus_oculatus
ENSCLAG00000003921	SF3B3	100	99.918	ENSLAFG00000012219	SF3B3	100	99.918	Loxodonta_africana
ENSCLAG00000003921	SF3B3	100	100.000	ENSMFAG00000045487	SF3B3	100	100.000	Macaca_fascicularis
ENSCLAG00000003921	SF3B3	100	100.000	ENSMMUG00000017812	SF3B3	100	100.000	Macaca_mulatta
ENSCLAG00000003921	SF3B3	100	100.000	ENSMNEG00000033385	SF3B3	100	100.000	Macaca_nemestrina
ENSCLAG00000003921	SF3B3	100	96.467	ENSMLEG00000043891	SF3B3	97	100.000	Mandrillus_leucophaeus
ENSCLAG00000003921	SF3B3	100	93.509	ENSMAMG00000016837	sf3b3	100	93.509	Mastacembelus_armatus
ENSCLAG00000003921	SF3B3	100	93.098	ENSMZEG00005010836	sf3b3	100	93.098	Maylandia_zebra
ENSCLAG00000003921	SF3B3	89	90.194	ENSMZEG00005026015	sf3b3	99	90.194	Maylandia_zebra
ENSCLAG00000003921	SF3B3	100	99.178	ENSMGAG00000001597	SF3B3	100	99.178	Meleagris_gallopavo
ENSCLAG00000003921	SF3B3	81	83.247	ENSMAUG00000013618	Sf3b3	95	83.247	Mesocricetus_auratus
ENSCLAG00000003921	SF3B3	100	98.852	ENSMICG00000001363	SF3B3	100	98.852	Microcebus_murinus
ENSCLAG00000003921	SF3B3	100	99.918	ENSMOCG00000006108	Sf3b3	100	99.918	Microtus_ochrogaster
ENSCLAG00000003921	SF3B3	89	90.564	ENSMMOG00000002598	sf3b3	97	90.564	Mola_mola
ENSCLAG00000003921	SF3B3	100	95.320	ENSMODG00000014363	SF3B3	100	95.320	Monodelphis_domestica
ENSCLAG00000003921	SF3B3	100	93.180	ENSMALG00000008014	sf3b3	100	93.180	Monopterus_albus
ENSCLAG00000003921	SF3B3	100	99.836	MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	Mus_caroli
ENSCLAG00000003921	SF3B3	100	99.918	ENSMUSG00000033732	Sf3b3	100	99.918	Mus_musculus
ENSCLAG00000003921	SF3B3	100	99.836	MGP_SPRETEiJ_G0032681	Sf3b3	100	99.836	Mus_spretus
ENSCLAG00000003921	SF3B3	100	99.918	ENSMPUG00000010277	SF3B3	100	99.918	Mustela_putorius_furo
ENSCLAG00000003921	SF3B3	100	99.836	ENSMLUG00000014607	SF3B3	100	99.836	Myotis_lucifugus
ENSCLAG00000003921	SF3B3	100	100.000	ENSNGAG00000021903	Sf3b3	100	100.000	Nannospalax_galili
ENSCLAG00000003921	SF3B3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSCLAG00000003921	SF3B3	100	98.522	ENSNLEG00000016127	SF3B3	99	100.000	Nomascus_leucogenys
ENSCLAG00000003921	SF3B3	92	98.945	ENSMEUG00000004479	SF3B3	94	98.945	Notamacropus_eugenii
ENSCLAG00000003921	SF3B3	98	96.731	ENSOPRG00000009847	SF3B3	100	96.731	Ochotona_princeps
ENSCLAG00000003921	SF3B3	100	99.918	ENSODEG00000014154	SF3B3	100	99.918	Octodon_degus
ENSCLAG00000003921	SF3B3	100	93.344	ENSONIG00000011198	sf3b3	100	93.344	Oreochromis_niloticus
ENSCLAG00000003921	SF3B3	100	99.671	ENSOANG00000001161	-	100	99.671	Ornithorhynchus_anatinus
ENSCLAG00000003921	SF3B3	100	97.617	ENSOCUG00000004139	SF3B3	100	97.617	Oryctolagus_cuniculus
ENSCLAG00000003921	SF3B3	100	93.180	ENSORLG00000013472	sf3b3	100	93.180	Oryzias_latipes
ENSCLAG00000003921	SF3B3	100	93.180	ENSORLG00020017473	sf3b3	100	93.180	Oryzias_latipes_hni
ENSCLAG00000003921	SF3B3	100	93.180	ENSORLG00015007710	sf3b3	100	93.180	Oryzias_latipes_hsok
ENSCLAG00000003921	SF3B3	100	92.851	ENSOMEG00000014483	sf3b3	100	92.851	Oryzias_melastigma
ENSCLAG00000003921	SF3B3	100	99.590	ENSOGAG00000016051	SF3B3	100	99.590	Otolemur_garnettii
ENSCLAG00000003921	SF3B3	100	99.672	ENSOARG00000004816	SF3B3	100	99.672	Ovis_aries
ENSCLAG00000003921	SF3B3	100	100.000	ENSPPAG00000026807	SF3B3	100	100.000	Pan_paniscus
ENSCLAG00000003921	SF3B3	100	99.918	ENSPPRG00000001686	SF3B3	100	99.918	Panthera_pardus
ENSCLAG00000003921	SF3B3	89	96.872	ENSPTIG00000020382	SF3B3	100	96.872	Panthera_tigris_altaica
ENSCLAG00000003921	SF3B3	100	100.000	ENSPTRG00000008308	SF3B3	100	100.000	Pan_troglodytes
ENSCLAG00000003921	SF3B3	100	100.000	ENSPANG00000024075	SF3B3	100	100.000	Papio_anubis
ENSCLAG00000003921	SF3B3	100	92.769	ENSPKIG00000002712	sf3b3	100	92.769	Paramormyrops_kingsleyae
ENSCLAG00000003921	SF3B3	89	98.988	ENSPSIG00000002232	SF3B3	100	98.988	Pelodiscus_sinensis
ENSCLAG00000003921	SF3B3	100	99.918	ENSPEMG00000008603	Sf3b3	100	99.918	Peromyscus_maniculatus_bairdii
ENSCLAG00000003921	SF3B3	100	91.865	ENSPMAG00000001793	sf3b3	100	91.865	Petromyzon_marinus
ENSCLAG00000003921	SF3B3	100	99.671	ENSPCIG00000014927	SF3B3	100	99.671	Phascolarctos_cinereus
ENSCLAG00000003921	SF3B3	100	92.687	ENSPFOG00000015516	sf3b3	100	92.687	Poecilia_formosa
ENSCLAG00000003921	SF3B3	100	92.687	ENSPLAG00000014330	sf3b3	100	92.687	Poecilia_latipinna
ENSCLAG00000003921	SF3B3	100	92.769	ENSPMEG00000019856	sf3b3	100	92.769	Poecilia_mexicana
ENSCLAG00000003921	SF3B3	81	93.598	ENSPREG00000019669	sf3b3	97	93.598	Poecilia_reticulata
ENSCLAG00000003921	SF3B3	95	99.903	ENSPPYG00000007539	SF3B3	100	99.903	Pongo_abelii
ENSCLAG00000003921	SF3B3	96	84.370	ENSPCAG00000002623	SF3B3	94	84.370	Procavia_capensis
ENSCLAG00000003921	SF3B3	93	99.832	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSCLAG00000003921	SF3B3	100	99.836	ENSPVAG00000000684	SF3B3	100	99.836	Pteropus_vampyrus
ENSCLAG00000003921	SF3B3	100	93.180	ENSPNYG00000003528	sf3b3	100	93.180	Pundamilia_nyererei
ENSCLAG00000003921	SF3B3	100	93.509	ENSPNAG00000015419	sf3b3	100	93.509	Pygocentrus_nattereri
ENSCLAG00000003921	SF3B3	100	99.918	ENSRNOG00000017724	Sf3b3	100	99.918	Rattus_norvegicus
ENSCLAG00000003921	SF3B3	100	100.000	ENSRBIG00000021904	SF3B3	100	100.000	Rhinopithecus_bieti
ENSCLAG00000003921	SF3B3	100	100.000	ENSRROG00000045703	SF3B3	100	100.000	Rhinopithecus_roxellana
ENSCLAG00000003921	SF3B3	100	100.000	ENSSBOG00000029156	SF3B3	100	100.000	Saimiri_boliviensis_boliviensis
ENSCLAG00000003921	SF3B3	100	99.671	ENSSHAG00000000372	SF3B3	100	99.671	Sarcophilus_harrisii
ENSCLAG00000003921	SF3B3	100	93.755	ENSSFOG00015012877	sf3b3	100	93.755	Scleropages_formosus
ENSCLAG00000003921	SF3B3	100	92.851	ENSSMAG00000014386	sf3b3	100	92.851	Scophthalmus_maximus
ENSCLAG00000003921	SF3B3	100	93.591	ENSSDUG00000021201	sf3b3	100	93.591	Seriola_dumerili
ENSCLAG00000003921	SF3B3	100	93.509	ENSSLDG00000017532	sf3b3	100	93.509	Seriola_lalandi_dorsalis
ENSCLAG00000003921	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSCLAG00000003921	SF3B3	100	98.932	ENSSPUG00000006253	SF3B3	100	98.932	Sphenodon_punctatus
ENSCLAG00000003921	SF3B3	100	85.703	ENSSPAG00000003125	sf3b3	100	85.703	Stegastes_partitus
ENSCLAG00000003921	SF3B3	100	99.918	ENSSSCG00000025323	SF3B3	100	99.918	Sus_scrofa
ENSCLAG00000003921	SF3B3	100	99.097	ENSTGUG00000006082	SF3B3	100	99.097	Taeniopygia_guttata
ENSCLAG00000003921	SF3B3	89	93.107	ENSTNIG00000004857	sf3b3	100	93.107	Tetraodon_nigroviridis
ENSCLAG00000003921	SF3B3	93	84.771	ENSTBEG00000002946	SF3B3	100	84.771	Tupaia_belangeri
ENSCLAG00000003921	SF3B3	100	99.096	ENSTTRG00000005855	SF3B3	100	99.096	Tursiops_truncatus
ENSCLAG00000003921	SF3B3	100	99.918	ENSUAMG00000006780	SF3B3	100	99.918	Ursus_americanus
ENSCLAG00000003921	SF3B3	100	99.918	ENSUMAG00000017757	SF3B3	100	99.918	Ursus_maritimus
ENSCLAG00000003921	SF3B3	100	83.730	ENSVPAG00000003202	SF3B3	100	83.730	Vicugna_pacos
ENSCLAG00000003921	SF3B3	100	99.836	ENSVVUG00000017922	SF3B3	100	99.836	Vulpes_vulpes
ENSCLAG00000003921	SF3B3	100	96.713	ENSXETG00000032869	SF3B3	100	96.713	Xenopus_tropicalis
ENSCLAG00000003921	SF3B3	77	94.161	ENSXCOG00000013628	sf3b3	97	94.161	Xiphophorus_couchianus
ENSCLAG00000003921	SF3B3	100	92.687	ENSXMAG00000006334	sf3b3	99	93.801	Xiphophorus_maculatus