EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000003938 (Gene tree)
Gene ID: 102005066
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 44424 bases
Position: chrJH721967.1:990429-1034852
Accession: 102005066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005553	ResIII	PF04851.15	7.9e-08	1	1
ENSCLAP00000005552	ResIII	PF04851.15	9.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005653	HELLS-201	2598	-	ENSCLAP00000005552	865 (aa)	-	-
ENSCLAT00000005654	HELLS-202	6477	XM_005407530	ENSCLAP00000005553	822 (aa)	XP_005407587	UPI0006965FB7

Gene Model

Click here to download ENSCLAG00000003938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000003938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000003938	HELLS	65	39.227	ENSCLAG00000000880	CHD1L	52	39.227
ENSCLAG00000003938	HELLS	63	46.800	ENSCLAG00000006153	SMARCA5	50	46.800
ENSCLAG00000003938	HELLS	65	47.410	ENSCLAG00000002171	SMARCA1	50	45.247
ENSCLAG00000003938	HELLS	72	36.538	ENSCLAG00000007137	CHD9	54	38.087

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000003938	HELLS	100	93.674	ENSG00000119969	HELLS	100	94.258	Homo_sapiens
ENSCLAG00000003938	HELLS	95	65.013	ENSAPOG00000007707	hells	99	63.433	Acanthochromis_polyacanthus
ENSCLAG00000003938	HELLS	100	92.831	ENSAMEG00000013525	HELLS	100	92.729	Ailuropoda_melanoleuca
ENSCLAG00000003938	HELLS	83	67.251	ENSACIG00000018996	hells	99	66.337	Amphilophus_citrinellus
ENSCLAG00000003938	HELLS	96	64.430	ENSAOCG00000006348	hells	97	64.621	Amphiprion_ocellaris
ENSCLAG00000003938	HELLS	96	64.051	ENSAPEG00000001422	hells	97	64.140	Amphiprion_percula
ENSCLAG00000003938	HELLS	98	65.394	ENSATEG00000008107	hells	99	63.391	Anabas_testudineus
ENSCLAG00000003938	HELLS	95	81.321	ENSAPLG00000002649	HELLS	99	80.813	Anas_platyrhynchos
ENSCLAG00000003938	HELLS	87	75.278	ENSACAG00000028785	HELLS	96	75.278	Anolis_carolinensis
ENSCLAG00000003938	HELLS	100	92.701	ENSANAG00000034765	-	100	92.429	Aotus_nancymaae
ENSCLAG00000003938	HELLS	98	63.704	ENSACLG00000007613	hells	99	63.333	Astatotilapia_calliptera
ENSCLAG00000003938	HELLS	84	66.957	ENSAMXG00000002088	hells	99	66.429	Astyanax_mexicanus
ENSCLAG00000003938	HELLS	82	93.134	ENSBTAG00000005979	HELLS	99	93.134	Bos_taurus
ENSCLAG00000003938	HELLS	100	92.701	ENSCJAG00000015819	HELLS	100	92.005	Callithrix_jacchus
ENSCLAG00000003938	HELLS	99	92.944	ENSCAFG00000008090	HELLS	100	92.491	Canis_familiaris
ENSCLAG00000003938	HELLS	96	93.393	ENSCAFG00020004809	HELLS	98	93.647	Canis_lupus_dingo
ENSCLAG00000003938	HELLS	100	89.903	ENSCHIG00000019462	HELLS	100	89.379	Capra_hircus
ENSCLAG00000003938	HELLS	100	91.484	ENSTSYG00000005811	-	99	91.484	Carlito_syrichta
ENSCLAG00000003938	HELLS	100	96.350	ENSCPOG00000003043	HELLS	100	96.301	Cavia_porcellus
ENSCLAG00000003938	HELLS	56	93.642	ENSCCAG00000026761	HELLS	97	93.642	Cebus_capucinus
ENSCLAG00000003938	HELLS	100	88.594	ENSCATG00000033830	HELLS	100	93.978	Cercocebus_atys
ENSCLAG00000003938	HELLS	87	93.978	ENSCSAG00000006181	HELLS	100	93.838	Chlorocebus_sabaeus
ENSCLAG00000003938	HELLS	87	82.123	ENSCPBG00000025739	HELLS	99	83.752	Chrysemys_picta_bellii
ENSCLAG00000003938	HELLS	100	88.364	ENSCANG00000037736	HELLS	100	93.417	Colobus_angolensis_palliatus
ENSCLAG00000003938	HELLS	100	90.511	ENSCGRG00001017410	Hells	100	89.294	Cricetulus_griseus_chok1gshd
ENSCLAG00000003938	HELLS	95	64.231	ENSCSEG00000016985	hells	99	64.231	Cynoglossus_semilaevis
ENSCLAG00000003938	HELLS	64	61.480	ENSCVAG00000000159	hells	97	61.236	Cyprinodon_variegatus
ENSCLAG00000003938	HELLS	95	65.783	ENSDARG00000057738	hells	95	65.815	Danio_rerio
ENSCLAG00000003938	HELLS	77	92.891	ENSDNOG00000017758	HELLS	100	92.891	Dasypus_novemcinctus
ENSCLAG00000003938	HELLS	100	90.389	ENSDORG00000011812	Hells	100	89.618	Dipodomys_ordii
ENSCLAG00000003938	HELLS	75	52.174	ENSEBUG00000016152	hells	93	52.174	Eptatretus_burgeri
ENSCLAG00000003938	HELLS	100	93.074	ENSEASG00005011764	HELLS	100	92.849	Equus_asinus_asinus
ENSCLAG00000003938	HELLS	100	92.944	ENSECAG00000018810	HELLS	100	92.721	Equus_caballus
ENSCLAG00000003938	HELLS	80	95.652	ENSEEUG00000007680	HELLS	91	95.652	Erinaceus_europaeus
ENSCLAG00000003938	HELLS	96	64.610	ENSELUG00000014909	hells	93	64.286	Esox_lucius
ENSCLAG00000003938	HELLS	87	93.838	ENSFCAG00000005206	HELLS	100	93.838	Felis_catus
ENSCLAG00000003938	HELLS	99	81.022	ENSFALG00000007136	HELLS	99	80.414	Ficedula_albicollis
ENSCLAG00000003938	HELLS	100	94.161	ENSFDAG00000010042	HELLS	100	94.647	Fukomys_damarensis
ENSCLAG00000003938	HELLS	99	63.681	ENSFHEG00000022950	hells	98	62.028	Fundulus_heteroclitus
ENSCLAG00000003938	HELLS	99	78.022	ENSGALG00000005451	HELLS	100	82.260	Gallus_gallus
ENSCLAG00000003938	HELLS	98	63.592	ENSGAFG00000001204	hells	96	62.230	Gambusia_affinis
ENSCLAG00000003938	HELLS	95	64.286	ENSGACG00000003897	hells	91	64.286	Gasterosteus_aculeatus
ENSCLAG00000003938	HELLS	87	81.399	ENSGAGG00000010269	HELLS	100	82.808	Gopherus_agassizii
ENSCLAG00000003938	HELLS	100	89.173	ENSGGOG00000008103	HELLS	100	93.978	Gorilla_gorilla
ENSCLAG00000003938	HELLS	98	64.901	ENSHBUG00000010270	hells	99	63.333	Haplochromis_burtoni
ENSCLAG00000003938	HELLS	73	93.558	ENSHGLG00000006537	-	100	93.558	Heterocephalus_glaber_female
ENSCLAG00000003938	HELLS	100	95.620	ENSHGLG00000011377	-	100	95.620	Heterocephalus_glaber_female
ENSCLAG00000003938	HELLS	89	85.165	ENSHGLG00100001957	-	94	85.165	Heterocephalus_glaber_male
ENSCLAG00000003938	HELLS	100	95.377	ENSHGLG00100017230	-	100	95.377	Heterocephalus_glaber_male
ENSCLAG00000003938	HELLS	86	65.726	ENSHCOG00000001119	hells	96	65.162	Hippocampus_comes
ENSCLAG00000003938	HELLS	99	64.520	ENSIPUG00000002634	HELLS	97	63.690	Ictalurus_punctatus
ENSCLAG00000003938	HELLS	100	93.187	ENSSTOG00000021976	HELLS	100	93.187	Ictidomys_tridecemlineatus
ENSCLAG00000003938	HELLS	99	86.503	ENSJJAG00000000865	Hells	99	86.012	Jaculus_jaculus
ENSCLAG00000003938	HELLS	99	65.521	ENSKMAG00000017279	hells	97	64.482	Kryptolebias_marmoratus
ENSCLAG00000003938	HELLS	98	65.394	ENSLBEG00000027807	hells	96	64.536	Labrus_bergylta
ENSCLAG00000003938	HELLS	100	92.579	ENSLAFG00000007049	HELLS	100	92.579	Loxodonta_africana
ENSCLAG00000003938	HELLS	100	93.552	ENSMFAG00000044053	HELLS	100	92.959	Macaca_fascicularis
ENSCLAG00000003938	HELLS	100	85.714	ENSMMUG00000017255	HELLS	100	93.939	Macaca_mulatta
ENSCLAG00000003938	HELLS	100	88.594	ENSMNEG00000042628	HELLS	100	93.978	Macaca_nemestrina
ENSCLAG00000003938	HELLS	100	93.552	ENSMLEG00000041751	HELLS	100	92.959	Mandrillus_leucophaeus
ENSCLAG00000003938	HELLS	95	64.459	ENSMAMG00000009850	hells	98	66.812	Mastacembelus_armatus
ENSCLAG00000003938	HELLS	98	64.901	ENSMZEG00005018414	hells	99	63.333	Maylandia_zebra
ENSCLAG00000003938	HELLS	97	80.124	ENSMGAG00000006818	HELLS	97	82.805	Meleagris_gallopavo
ENSCLAG00000003938	HELLS	98	88.279	ENSMAUG00000021941	Hells	97	88.221	Mesocricetus_auratus
ENSCLAG00000003938	HELLS	70	91.986	ENSMICG00000046554	-	95	91.986	Microcebus_murinus
ENSCLAG00000003938	HELLS	100	88.929	ENSMOCG00000019342	Hells	100	88.564	Microtus_ochrogaster
ENSCLAG00000003938	HELLS	99	59.976	ENSMMOG00000007950	hells	97	59.246	Mola_mola
ENSCLAG00000003938	HELLS	98	83.209	ENSMODG00000005589	-	51	83.605	Monodelphis_domestica
ENSCLAG00000003938	HELLS	98	62.222	ENSMALG00000010244	hells	94	61.605	Monopterus_albus
ENSCLAG00000003938	HELLS	100	89.781	MGP_CAROLIEiJ_G0022930	Hells	100	89.416	Mus_caroli
ENSCLAG00000003938	HELLS	100	89.659	ENSMUSG00000025001	Hells	100	89.294	Mus_musculus
ENSCLAG00000003938	HELLS	100	90.511	MGP_PahariEiJ_G0014423	Hells	100	90.146	Mus_pahari
ENSCLAG00000003938	HELLS	100	90.146	MGP_SPRETEiJ_G0023848	Hells	100	89.781	Mus_spretus
ENSCLAG00000003938	HELLS	99	93.521	ENSMPUG00000017131	HELLS	100	92.840	Mustela_putorius_furo
ENSCLAG00000003938	HELLS	99	90.256	ENSMLUG00000030511	HELLS	100	89.499	Myotis_lucifugus
ENSCLAG00000003938	HELLS	100	90.511	ENSNGAG00000014049	Hells	100	89.976	Nannospalax_galili
ENSCLAG00000003938	HELLS	98	60.714	ENSNBRG00000024242	hells	99	60.468	Neolamprologus_brichardi
ENSCLAG00000003938	HELLS	100	88.249	ENSNLEG00000012987	HELLS	100	93.557	Nomascus_leucogenys
ENSCLAG00000003938	HELLS	100	93.796	ENSODEG00000015916	HELLS	100	93.914	Octodon_degus
ENSCLAG00000003938	HELLS	99	64.908	ENSONIG00000013166	hells	97	63.528	Oreochromis_niloticus
ENSCLAG00000003938	HELLS	100	82.989	ENSOANG00000005139	HELLS	100	83.051	Ornithorhynchus_anatinus
ENSCLAG00000003938	HELLS	99	92.656	ENSOCUG00000026731	HELLS	100	91.766	Oryctolagus_cuniculus
ENSCLAG00000003938	HELLS	99	64.251	ENSORLG00000000987	hells	97	62.667	Oryzias_latipes
ENSCLAG00000003938	HELLS	99	63.759	ENSORLG00020003952	hells	97	62.667	Oryzias_latipes_hni
ENSCLAG00000003938	HELLS	99	64.005	ENSORLG00015010960	hells	96	63.132	Oryzias_latipes_hsok
ENSCLAG00000003938	HELLS	99	63.659	ENSOMEG00000000135	hells	96	62.888	Oryzias_melastigma
ENSCLAG00000003938	HELLS	100	91.849	ENSOGAG00000017145	HELLS	99	91.849	Otolemur_garnettii
ENSCLAG00000003938	HELLS	100	92.579	ENSOARG00000004495	HELLS	100	92.124	Ovis_aries
ENSCLAG00000003938	HELLS	100	89.173	ENSPPAG00000001726	HELLS	100	93.978	Pan_paniscus
ENSCLAG00000003938	HELLS	87	93.697	ENSPPRG00000005839	HELLS	100	93.978	Panthera_pardus
ENSCLAG00000003938	HELLS	99	93.057	ENSPTIG00000007647	HELLS	100	93.978	Panthera_tigris_altaica
ENSCLAG00000003938	HELLS	100	89.173	ENSPTRG00000002778	HELLS	99	93.276	Pan_troglodytes
ENSCLAG00000003938	HELLS	100	88.594	ENSPANG00000033528	HELLS	100	93.978	Papio_anubis
ENSCLAG00000003938	HELLS	99	64.951	ENSPKIG00000010890	hells	99	62.394	Paramormyrops_kingsleyae
ENSCLAG00000003938	HELLS	96	80.454	ENSPSIG00000005462	HELLS	100	80.706	Pelodiscus_sinensis
ENSCLAG00000003938	HELLS	99	59.295	ENSPMGG00000014690	hells	95	67.113	Periophthalmus_magnuspinnatus
ENSCLAG00000003938	HELLS	100	82.725	ENSPEMG00000017579	Hells	100	82.360	Peromyscus_maniculatus_bairdii
ENSCLAG00000003938	HELLS	98	60.123	ENSPMAG00000004376	hells	98	60.123	Petromyzon_marinus
ENSCLAG00000003938	HELLS	100	84.364	ENSPCIG00000013361	HELLS	100	83.948	Phascolarctos_cinereus
ENSCLAG00000003938	HELLS	99	62.668	ENSPFOG00000001954	hells	96	62.816	Poecilia_formosa
ENSCLAG00000003938	HELLS	99	62.546	ENSPLAG00000006504	hells	97	63.188	Poecilia_latipinna
ENSCLAG00000003938	HELLS	99	62.668	ENSPMEG00000003024	hells	97	63.329	Poecilia_mexicana
ENSCLAG00000003938	HELLS	99	62.546	ENSPREG00000020337	hells	96	62.696	Poecilia_reticulata
ENSCLAG00000003938	HELLS	100	88.594	ENSPPYG00000002502	HELLS	100	88.348	Pongo_abelii
ENSCLAG00000003938	HELLS	100	85.401	ENSPCAG00000013618	HELLS	100	84.845	Procavia_capensis
ENSCLAG00000003938	HELLS	100	89.892	ENSPCOG00000023985	HELLS	100	92.829	Propithecus_coquereli
ENSCLAG00000003938	HELLS	92	93.923	ENSPVAG00000017899	HELLS	92	93.923	Pteropus_vampyrus
ENSCLAG00000003938	HELLS	98	62.392	ENSPNYG00000009100	hells	99	62.299	Pundamilia_nyererei
ENSCLAG00000003938	HELLS	96	64.106	ENSPNAG00000029968	hells	99	62.179	Pygocentrus_nattereri
ENSCLAG00000003938	HELLS	100	90.389	ENSRNOG00000047104	Hells	100	89.857	Rattus_norvegicus
ENSCLAG00000003938	HELLS	100	90.389	ENSRNOG00000047692	LOC100911660	100	90.024	Rattus_norvegicus
ENSCLAG00000003938	HELLS	100	87.384	ENSRBIG00000041080	HELLS	99	94.231	Rhinopithecus_bieti
ENSCLAG00000003938	HELLS	100	88.928	ENSRROG00000040169	HELLS	100	93.838	Rhinopithecus_roxellana
ENSCLAG00000003938	HELLS	100	84.121	ENSSHAG00000014358	HELLS	100	84.121	Sarcophilus_harrisii
ENSCLAG00000003938	HELLS	96	66.792	ENSSFOG00015017895	hells	98	66.340	Scleropages_formosus
ENSCLAG00000003938	HELLS	99	64.049	ENSSMAG00000017423	hells	99	62.854	Scophthalmus_maximus
ENSCLAG00000003938	HELLS	98	65.025	ENSSDUG00000016924	hells	99	63.490	Seriola_dumerili
ENSCLAG00000003938	HELLS	98	63.009	ENSSLDG00000018960	hells	97	61.905	Seriola_lalandi_dorsalis
ENSCLAG00000003938	HELLS	100	78.858	ENSSPUG00000017425	HELLS	100	80.025	Sphenodon_punctatus
ENSCLAG00000003938	HELLS	96	65.526	ENSSPAG00000015579	hells	99	65.357	Stegastes_partitus
ENSCLAG00000003938	HELLS	100	93.309	ENSSSCG00000010486	HELLS	100	92.959	Sus_scrofa
ENSCLAG00000003938	HELLS	100	80.606	ENSTGUG00000007157	HELLS	99	80.121	Taeniopygia_guttata
ENSCLAG00000003938	HELLS	95	66.115	ENSTRUG00000000350	hells	96	65.054	Takifugu_rubripes
ENSCLAG00000003938	HELLS	98	55.961	ENSTNIG00000003738	hells	98	56.877	Tetraodon_nigroviridis
ENSCLAG00000003938	HELLS	100	92.701	ENSUAMG00000003343	HELLS	100	92.701	Ursus_americanus
ENSCLAG00000003938	HELLS	100	93.066	ENSUMAG00000004748	HELLS	99	93.750	Ursus_maritimus
ENSCLAG00000003938	HELLS	100	91.363	ENSVPAG00000010115	HELLS	100	91.408	Vicugna_pacos
ENSCLAG00000003938	HELLS	99	93.057	ENSVVUG00000022808	HELLS	100	92.840	Vulpes_vulpes
ENSCLAG00000003938	HELLS	99	61.501	ENSXCOG00000013840	hells	98	61.118	Xiphophorus_couchianus
ENSCLAG00000003938	HELLS	99	62.791	ENSXMAG00000005731	hells	97	63.791	Xiphophorus_maculatus