EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000004126 (Gene tree)
Gene ID: 102017262
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 23818 bases
Position: chrJH721971.1:6209777-6233594
Accession: 102017262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005820	CPSF_A	PF03178.15	3e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005921	DDB1-201	4109	XM_005408163	ENSCLAP00000005820	1140 (aa)	XP_005408220	UPI00038EEBCA

Gene Model

Click here to download ENSCLAG00000004126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004126's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004126	DDB1	100	99.211	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSCLAG00000004126	DDB1	98	91.554	ENSAPOG00000005036	ddb1	99	91.531	Acanthochromis_polyacanthus
ENSCLAG00000004126	DDB1	100	99.298	ENSAMEG00000016518	DDB1	100	99.298	Ailuropoda_melanoleuca
ENSCLAG00000004126	DDB1	86	91.633	ENSACIG00000020624	ddb1	99	91.633	Amphilophus_citrinellus
ENSCLAG00000004126	DDB1	100	91.228	ENSAOCG00000003066	ddb1	100	91.228	Amphiprion_ocellaris
ENSCLAG00000004126	DDB1	100	91.316	ENSAPEG00000000092	ddb1	100	91.316	Amphiprion_percula
ENSCLAG00000004126	DDB1	94	91.535	ENSATEG00000020571	ddb1	97	91.535	Anabas_testudineus
ENSCLAG00000004126	DDB1	98	96.000	ENSAPLG00000007174	DDB1	99	96.000	Anas_platyrhynchos
ENSCLAG00000004126	DDB1	100	96.667	ENSACAG00000017758	DDB1	100	96.667	Anolis_carolinensis
ENSCLAG00000004126	DDB1	100	99.211	ENSANAG00000021878	DDB1	100	99.211	Aotus_nancymaae
ENSCLAG00000004126	DDB1	100	91.404	ENSACLG00000012401	ddb1	100	91.404	Astatotilapia_calliptera
ENSCLAG00000004126	DDB1	100	99.123	ENSBTAG00000021569	DDB1	93	99.123	Bos_taurus
ENSCLAG00000004126	DDB1	100	37.040	WBGene00010890	ddb-1	100	36.775	Caenorhabditis_elegans
ENSCLAG00000004126	DDB1	100	99.211	ENSCJAG00000019319	DDB1	100	99.211	Callithrix_jacchus
ENSCLAG00000004126	DDB1	100	99.298	ENSCAFG00000016264	DDB1	100	99.298	Canis_familiaris
ENSCLAG00000004126	DDB1	94	99.070	ENSCAFG00020012722	DDB1	99	99.070	Canis_lupus_dingo
ENSCLAG00000004126	DDB1	100	99.123	ENSCHIG00000014969	DDB1	100	99.123	Capra_hircus
ENSCLAG00000004126	DDB1	100	98.860	ENSTSYG00000008027	DDB1	100	98.860	Carlito_syrichta
ENSCLAG00000004126	DDB1	98	99.821	ENSCAPG00000010786	DDB1	100	99.821	Cavia_aperea
ENSCLAG00000004126	DDB1	100	99.825	ENSCPOG00000009956	DDB1	100	99.825	Cavia_porcellus
ENSCLAG00000004126	DDB1	100	99.211	ENSCCAG00000035883	DDB1	100	99.211	Cebus_capucinus
ENSCLAG00000004126	DDB1	100	96.701	ENSCATG00000044495	DDB1	100	96.701	Cercocebus_atys
ENSCLAG00000004126	DDB1	100	99.211	ENSCSAG00000006392	DDB1	100	99.211	Chlorocebus_sabaeus
ENSCLAG00000004126	DDB1	88	92.235	ENSCHOG00000011377	DDB1	90	92.235	Choloepus_hoffmanni
ENSCLAG00000004126	DDB1	100	97.368	ENSCPBG00000017728	DDB1	100	97.368	Chrysemys_picta_bellii
ENSCLAG00000004126	DDB1	100	61.979	ENSCING00000007437	-	100	61.892	Ciona_intestinalis
ENSCLAG00000004126	DDB1	94	60.461	ENSCSAVG00000004783	-	100	60.461	Ciona_savignyi
ENSCLAG00000004126	DDB1	100	99.211	ENSCANG00000019948	DDB1	100	99.211	Colobus_angolensis_palliatus
ENSCLAG00000004126	DDB1	100	99.386	ENSCGRG00001016599	Ddb1	100	99.386	Cricetulus_griseus_chok1gshd
ENSCLAG00000004126	DDB1	100	99.386	ENSCGRG00000013427	Ddb1	100	99.386	Cricetulus_griseus_crigri
ENSCLAG00000004126	DDB1	93	91.046	ENSCSEG00000012499	ddb1	99	89.474	Cynoglossus_semilaevis
ENSCLAG00000004126	DDB1	94	91.240	ENSCVAG00000019531	ddb1	99	91.240	Cyprinodon_variegatus
ENSCLAG00000004126	DDB1	100	88.266	ENSDARG00000074431	ddb1	100	88.266	Danio_rerio
ENSCLAG00000004126	DDB1	94	98.977	ENSDNOG00000014884	DDB1	97	98.977	Dasypus_novemcinctus
ENSCLAG00000004126	DDB1	84	99.548	ENSDORG00000000127	Ddb1	100	99.548	Dipodomys_ordii
ENSCLAG00000004126	DDB1	100	60.873	FBgn0260962	pic	100	60.664	Drosophila_melanogaster
ENSCLAG00000004126	DDB1	71	99.606	ENSETEG00000001053	-	71	99.606	Echinops_telfairi
ENSCLAG00000004126	DDB1	78	84.702	ENSEBUG00000014593	ddb1	97	84.702	Eptatretus_burgeri
ENSCLAG00000004126	DDB1	100	99.123	ENSEASG00005008184	DDB1	100	99.123	Equus_asinus_asinus
ENSCLAG00000004126	DDB1	100	99.035	ENSECAG00000012136	DDB1	100	99.035	Equus_caballus
ENSCLAG00000004126	DDB1	85	96.970	ENSEEUG00000003194	DDB1	85	96.970	Erinaceus_europaeus
ENSCLAG00000004126	DDB1	100	91.140	ENSELUG00000023868	ddb1	100	91.140	Esox_lucius
ENSCLAG00000004126	DDB1	100	99.298	ENSFCAG00000029716	DDB1	100	99.298	Felis_catus
ENSCLAG00000004126	DDB1	100	96.413	ENSFALG00000011981	DDB1	100	96.413	Ficedula_albicollis
ENSCLAG00000004126	DDB1	100	99.386	ENSFDAG00000005128	DDB1	100	99.386	Fukomys_damarensis
ENSCLAG00000004126	DDB1	90	90.980	ENSFHEG00000022133	ddb1	98	90.980	Fundulus_heteroclitus
ENSCLAG00000004126	DDB1	79	94.314	ENSGMOG00000019386	ddb1	94	94.314	Gadus_morhua
ENSCLAG00000004126	DDB1	100	96.579	ENSGALG00000042333	DDB1	100	96.579	Gallus_gallus
ENSCLAG00000004126	DDB1	94	91.240	ENSGAFG00000013142	ddb1	99	91.240	Gambusia_affinis
ENSCLAG00000004126	DDB1	96	90.376	ENSGACG00000017182	ddb1	100	90.376	Gasterosteus_aculeatus
ENSCLAG00000004126	DDB1	95	97.232	ENSGAGG00000014124	DDB1	100	97.232	Gopherus_agassizii
ENSCLAG00000004126	DDB1	100	99.211	ENSGGOG00000004052	DDB1	100	99.211	Gorilla_gorilla
ENSCLAG00000004126	DDB1	100	91.404	ENSHBUG00000008873	ddb1	100	91.404	Haplochromis_burtoni
ENSCLAG00000004126	DDB1	100	99.298	ENSHGLG00000018430	DDB1	100	99.298	Heterocephalus_glaber_female
ENSCLAG00000004126	DDB1	100	98.246	ENSHGLG00100014475	DDB1	100	98.246	Heterocephalus_glaber_male
ENSCLAG00000004126	DDB1	94	90.799	ENSHCOG00000018670	ddb1	98	90.799	Hippocampus_comes
ENSCLAG00000004126	DDB1	100	90.702	ENSIPUG00000005612	DDB1	100	90.702	Ictalurus_punctatus
ENSCLAG00000004126	DDB1	100	99.211	ENSSTOG00000007552	DDB1	100	99.211	Ictidomys_tridecemlineatus
ENSCLAG00000004126	DDB1	100	99.035	ENSJJAG00000017769	Ddb1	100	99.035	Jaculus_jaculus
ENSCLAG00000004126	DDB1	94	91.146	ENSKMAG00000002315	ddb1	99	91.146	Kryptolebias_marmoratus
ENSCLAG00000004126	DDB1	85	91.503	ENSLBEG00000017065	ddb1	99	91.503	Labrus_bergylta
ENSCLAG00000004126	DDB1	100	93.257	ENSLACG00000017611	DDB1	100	93.257	Latimeria_chalumnae
ENSCLAG00000004126	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSCLAG00000004126	DDB1	100	99.035	ENSLAFG00000011513	DDB1	100	99.035	Loxodonta_africana
ENSCLAG00000004126	DDB1	100	99.211	ENSMFAG00000042035	DDB1	100	99.211	Macaca_fascicularis
ENSCLAG00000004126	DDB1	99	99.204	ENSMMUG00000002691	DDB1	99	99.204	Macaca_mulatta
ENSCLAG00000004126	DDB1	100	99.211	ENSMNEG00000031559	DDB1	100	99.211	Macaca_nemestrina
ENSCLAG00000004126	DDB1	100	99.211	ENSMLEG00000044136	DDB1	100	99.211	Mandrillus_leucophaeus
ENSCLAG00000004126	DDB1	100	91.404	ENSMAMG00000014372	ddb1	100	91.404	Mastacembelus_armatus
ENSCLAG00000004126	DDB1	100	91.316	ENSMZEG00005013835	ddb1	100	91.316	Maylandia_zebra
ENSCLAG00000004126	DDB1	94	95.903	ENSMGAG00000004990	DDB1	100	95.903	Meleagris_gallopavo
ENSCLAG00000004126	DDB1	100	99.386	ENSMAUG00000012926	Ddb1	100	99.386	Mesocricetus_auratus
ENSCLAG00000004126	DDB1	100	99.211	ENSMICG00000013703	DDB1	100	99.211	Microcebus_murinus
ENSCLAG00000004126	DDB1	100	99.123	ENSMOCG00000020499	Ddb1	100	99.123	Microtus_ochrogaster
ENSCLAG00000004126	DDB1	86	91.633	ENSMMOG00000001758	ddb1	99	91.633	Mola_mola
ENSCLAG00000004126	DDB1	100	88.754	ENSMODG00000020353	DDB1	100	88.754	Monodelphis_domestica
ENSCLAG00000004126	DDB1	100	91.404	ENSMALG00000014071	ddb1	100	91.404	Monopterus_albus
ENSCLAG00000004126	DDB1	100	99.298	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.298	Mus_caroli
ENSCLAG00000004126	DDB1	100	99.123	ENSMUSG00000024740	Ddb1	100	99.123	Mus_musculus
ENSCLAG00000004126	DDB1	100	99.298	MGP_PahariEiJ_G0014189	Ddb1	100	99.298	Mus_pahari
ENSCLAG00000004126	DDB1	100	99.211	MGP_SPRETEiJ_G0023609	Ddb1	100	99.211	Mus_spretus
ENSCLAG00000004126	DDB1	100	95.965	ENSMPUG00000014200	DDB1	100	95.965	Mustela_putorius_furo
ENSCLAG00000004126	DDB1	100	98.860	ENSMLUG00000013232	DDB1	100	98.860	Myotis_lucifugus
ENSCLAG00000004126	DDB1	100	99.123	ENSNGAG00000009384	Ddb1	100	99.123	Nannospalax_galili
ENSCLAG00000004126	DDB1	100	91.491	ENSNBRG00000019581	ddb1	100	91.491	Neolamprologus_brichardi
ENSCLAG00000004126	DDB1	100	96.094	ENSNLEG00000002022	DDB1	100	96.094	Nomascus_leucogenys
ENSCLAG00000004126	DDB1	90	99.296	ENSMEUG00000001099	DDB1	92	99.296	Notamacropus_eugenii
ENSCLAG00000004126	DDB1	90	90.495	ENSOPRG00000008254	DDB1	90	90.495	Ochotona_princeps
ENSCLAG00000004126	DDB1	100	99.649	ENSODEG00000002419	DDB1	100	99.649	Octodon_degus
ENSCLAG00000004126	DDB1	100	91.404	ENSONIG00000005804	ddb1	100	91.404	Oreochromis_niloticus
ENSCLAG00000004126	DDB1	91	97.578	ENSOANG00000004897	DDB1	100	97.578	Ornithorhynchus_anatinus
ENSCLAG00000004126	DDB1	100	99.211	ENSOCUG00000001667	DDB1	100	99.211	Oryctolagus_cuniculus
ENSCLAG00000004126	DDB1	96	89.826	ENSORLG00000001399	ddb1	98	91.066	Oryzias_latipes
ENSCLAG00000004126	DDB1	96	89.734	ENSORLG00020001277	ddb1	97	89.734	Oryzias_latipes_hni
ENSCLAG00000004126	DDB1	94	90.884	ENSORLG00015002080	ddb1	99	90.884	Oryzias_latipes_hsok
ENSCLAG00000004126	DDB1	96	89.699	ENSOMEG00000006181	ddb1	99	89.699	Oryzias_melastigma
ENSCLAG00000004126	DDB1	100	99.035	ENSOGAG00000016103	DDB1	100	99.035	Otolemur_garnettii
ENSCLAG00000004126	DDB1	99	99.110	ENSOARG00000011716	DDB1	98	99.110	Ovis_aries
ENSCLAG00000004126	DDB1	100	99.211	ENSPPAG00000035343	DDB1	100	99.211	Pan_paniscus
ENSCLAG00000004126	DDB1	100	99.298	ENSPPRG00000013300	DDB1	100	99.298	Panthera_pardus
ENSCLAG00000004126	DDB1	98	99.285	ENSPTIG00000006909	DDB1	98	99.285	Panthera_tigris_altaica
ENSCLAG00000004126	DDB1	100	99.211	ENSPTRG00000003737	DDB1	100	99.211	Pan_troglodytes
ENSCLAG00000004126	DDB1	100	99.211	ENSPANG00000000242	DDB1	100	99.211	Papio_anubis
ENSCLAG00000004126	DDB1	94	91.240	ENSPKIG00000019213	ddb1	94	91.240	Paramormyrops_kingsleyae
ENSCLAG00000004126	DDB1	98	96.530	ENSPSIG00000013275	DDB1	100	96.530	Pelodiscus_sinensis
ENSCLAG00000004126	DDB1	86	91.327	ENSPMGG00000021179	ddb1	99	91.327	Periophthalmus_magnuspinnatus
ENSCLAG00000004126	DDB1	100	99.386	ENSPEMG00000012241	Ddb1	100	99.386	Peromyscus_maniculatus_bairdii
ENSCLAG00000004126	DDB1	89	86.837	ENSPMAG00000008479	ddb1	100	86.837	Petromyzon_marinus
ENSCLAG00000004126	DDB1	100	98.772	ENSPCIG00000002643	DDB1	100	98.772	Phascolarctos_cinereus
ENSCLAG00000004126	DDB1	100	90.798	ENSPFOG00000002768	ddb1	100	90.798	Poecilia_formosa
ENSCLAG00000004126	DDB1	100	90.614	ENSPLAG00000017227	ddb1	100	90.614	Poecilia_latipinna
ENSCLAG00000004126	DDB1	100	90.614	ENSPMEG00000011398	ddb1	100	90.614	Poecilia_mexicana
ENSCLAG00000004126	DDB1	94	91.163	ENSPREG00000004440	ddb1	98	91.163	Poecilia_reticulata
ENSCLAG00000004126	DDB1	100	94.328	ENSPPYG00000003193	DDB1	100	94.328	Pongo_abelii
ENSCLAG00000004126	DDB1	85	99.104	ENSPCAG00000011040	DDB1	85	99.104	Procavia_capensis
ENSCLAG00000004126	DDB1	100	97.636	ENSPCOG00000015176	DDB1	100	97.636	Propithecus_coquereli
ENSCLAG00000004126	DDB1	100	99.123	ENSPVAG00000003847	DDB1	100	99.123	Pteropus_vampyrus
ENSCLAG00000004126	DDB1	94	91.146	ENSPNAG00000006635	ddb1	97	91.146	Pygocentrus_nattereri
ENSCLAG00000004126	DDB1	100	99.298	ENSRNOG00000020715	Ddb1	100	99.298	Rattus_norvegicus
ENSCLAG00000004126	DDB1	100	99.211	ENSRBIG00000033611	DDB1	100	99.211	Rhinopithecus_bieti
ENSCLAG00000004126	DDB1	100	99.211	ENSRROG00000041407	DDB1	100	99.211	Rhinopithecus_roxellana
ENSCLAG00000004126	DDB1	100	99.123	ENSSBOG00000019775	DDB1	100	99.123	Saimiri_boliviensis_boliviensis
ENSCLAG00000004126	DDB1	94	96.449	ENSSHAG00000011600	DDB1	100	96.449	Sarcophilus_harrisii
ENSCLAG00000004126	DDB1	94	91.357	ENSSFOG00015011151	ddb1	97	91.357	Scleropages_formosus
ENSCLAG00000004126	DDB1	100	90.965	ENSSMAG00000009495	ddb1	100	90.965	Scophthalmus_maximus
ENSCLAG00000004126	DDB1	100	91.316	ENSSDUG00000004642	ddb1	100	91.316	Seriola_dumerili
ENSCLAG00000004126	DDB1	100	91.316	ENSSLDG00000015804	ddb1	100	91.316	Seriola_lalandi_dorsalis
ENSCLAG00000004126	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSCLAG00000004126	DDB1	100	97.281	ENSSPUG00000019338	DDB1	100	97.281	Sphenodon_punctatus
ENSCLAG00000004126	DDB1	94	91.442	ENSSPAG00000009888	ddb1	99	91.442	Stegastes_partitus
ENSCLAG00000004126	DDB1	100	98.246	ENSSSCG00000013094	DDB1	100	98.246	Sus_scrofa
ENSCLAG00000004126	DDB1	100	96.579	ENSTGUG00000006414	DDB1	100	96.579	Taeniopygia_guttata
ENSCLAG00000004126	DDB1	94	90.214	ENSTRUG00000016682	ddb1	98	90.214	Takifugu_rubripes
ENSCLAG00000004126	DDB1	88	85.030	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSCLAG00000004126	DDB1	92	94.517	ENSTTRG00000011055	DDB1	94	94.517	Tursiops_truncatus
ENSCLAG00000004126	DDB1	94	99.070	ENSUAMG00000017793	DDB1	93	99.070	Ursus_americanus
ENSCLAG00000004126	DDB1	94	99.070	ENSUMAG00000011788	DDB1	98	99.070	Ursus_maritimus
ENSCLAG00000004126	DDB1	90	99.020	ENSVPAG00000007963	DDB1	92	99.020	Vicugna_pacos
ENSCLAG00000004126	DDB1	100	99.211	ENSVVUG00000004987	DDB1	100	99.211	Vulpes_vulpes
ENSCLAG00000004126	DDB1	100	93.182	ENSXETG00000008820	ddb1	100	93.182	Xenopus_tropicalis
ENSCLAG00000004126	DDB1	86	91.122	ENSXCOG00000013956	ddb1	99	91.122	Xiphophorus_couchianus
ENSCLAG00000004126	DDB1	94	91.053	ENSXMAG00000000022	ddb1	99	91.053	Xiphophorus_maculatus