EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000004127 (Gene tree)
Gene ID: 102004948
Gene Symbol: RNF17
Alias: FLJ11045|Mmip-2|SPATA23|TDRD4
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 147719 bases
Position: chrJH721957.1:282653-430371
Accession: 102004948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005821	TUDOR	PF00567.24	3.3e-83	1	5
ENSCLAP00000005821	TUDOR	PF00567.24	3.3e-83	2	5
ENSCLAP00000005821	TUDOR	PF00567.24	3.3e-83	3	5
ENSCLAP00000005821	TUDOR	PF00567.24	3.3e-83	4	5
ENSCLAP00000005821	TUDOR	PF00567.24	3.3e-83	5	5
ENSCLAP00000005822	TUDOR	PF00567.24	3.3e-83	1	5
ENSCLAP00000005822	TUDOR	PF00567.24	3.3e-83	2	5
ENSCLAP00000005822	TUDOR	PF00567.24	3.3e-83	3	5
ENSCLAP00000005822	TUDOR	PF00567.24	3.3e-83	4	5
ENSCLAP00000005822	TUDOR	PF00567.24	3.3e-83	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000005922	RNF17-201	5836	-	ENSCLAP00000005821	1621 (aa)	-	UPI0006979C38
ENSCLAT00000005923	RNF17-202	5419	XM_013505510	ENSCLAP00000005822	1621 (aa)	XP_013360964	UPI0006979C38

Gene Model

Click here to download ENSCLAG00000004127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000004127	RNF17	72	32.353	ENSCLAG00000003935	TDRD1	70	32.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004127	RNF17	100	75.831	ENSG00000132972	RNF17	99	81.594	Homo_sapiens
ENSCLAG00000004127	RNF17	81	32.684	ENSAPOG00000017034	rnf17	76	35.228	Acanthochromis_polyacanthus
ENSCLAG00000004127	RNF17	100	78.900	ENSAMEG00000017340	RNF17	100	78.900	Ailuropoda_melanoleuca
ENSCLAG00000004127	RNF17	97	32.606	ENSAOCG00000018283	rnf17	98	32.988	Amphiprion_ocellaris
ENSCLAG00000004127	RNF17	74	34.822	ENSAPEG00000022338	rnf17	83	34.628	Amphiprion_percula
ENSCLAG00000004127	RNF17	72	35.774	ENSATEG00000002067	rnf17	97	33.126	Anabas_testudineus
ENSCLAG00000004127	RNF17	89	49.116	ENSAPLG00000003969	RNF17	100	49.522	Anas_platyrhynchos
ENSCLAG00000004127	RNF17	93	46.388	ENSACAG00000001418	RNF17	93	46.256	Anolis_carolinensis
ENSCLAG00000004127	RNF17	92	73.799	ENSANAG00000029969	RNF17	95	73.799	Aotus_nancymaae
ENSCLAG00000004127	RNF17	97	31.246	ENSACLG00000018279	rnf17	98	31.634	Astatotilapia_calliptera
ENSCLAG00000004127	RNF17	74	34.739	ENSAMXG00000011002	rnf17	94	34.739	Astyanax_mexicanus
ENSCLAG00000004127	RNF17	51	78.635	ENSBTAG00000000278	RNF17	100	78.635	Bos_taurus
ENSCLAG00000004127	RNF17	100	73.671	ENSCJAG00000018937	RNF17	100	74.815	Callithrix_jacchus
ENSCLAG00000004127	RNF17	98	79.259	ENSCAFG00000007418	RNF17	100	82.091	Canis_familiaris
ENSCLAG00000004127	RNF17	100	73.321	ENSCHIG00000026716	RNF17	99	80.715	Capra_hircus
ENSCLAG00000004127	RNF17	97	75.109	ENSTSYG00000000365	RNF17	99	75.109	Carlito_syrichta
ENSCLAG00000004127	RNF17	83	73.715	ENSCAPG00000012908	RNF17	99	73.715	Cavia_aperea
ENSCLAG00000004127	RNF17	100	74.034	ENSCCAG00000026725	RNF17	99	75.852	Cebus_capucinus
ENSCLAG00000004127	RNF17	100	74.879	ENSCATG00000040352	RNF17	100	76.679	Cercocebus_atys
ENSCLAG00000004127	RNF17	100	74.940	ENSCSAG00000018019	RNF17	100	74.940	Chlorocebus_sabaeus
ENSCLAG00000004127	RNF17	90	81.356	ENSCHOG00000013310	RNF17	91	81.356	Choloepus_hoffmanni
ENSCLAG00000004127	RNF17	93	57.312	ENSCPBG00000020920	RNF17	97	57.642	Chrysemys_picta_bellii
ENSCLAG00000004127	RNF17	99	74.502	ENSCANG00000032927	RNF17	99	76.524	Colobus_angolensis_palliatus
ENSCLAG00000004127	RNF17	100	77.859	ENSCGRG00001022658	Rnf17	100	77.859	Cricetulus_griseus_chok1gshd
ENSCLAG00000004127	RNF17	100	77.859	ENSCGRG00000009924	Rnf17	100	77.859	Cricetulus_griseus_crigri
ENSCLAG00000004127	RNF17	65	33.582	ENSCSEG00000008626	rnf17	75	33.302	Cynoglossus_semilaevis
ENSCLAG00000004127	RNF17	69	32.613	ENSCVAG00000017008	rnf17	83	32.613	Cyprinodon_variegatus
ENSCLAG00000004127	RNF17	97	32.192	ENSDARG00000056387	rnf17	98	32.192	Danio_rerio
ENSCLAG00000004127	RNF17	99	78.398	ENSDNOG00000006115	RNF17	99	78.398	Dasypus_novemcinctus
ENSCLAG00000004127	RNF17	72	87.500	ENSETEG00000017874	-	73	87.500	Echinops_telfairi
ENSCLAG00000004127	RNF17	100	80.716	ENSECAG00000017152	RNF17	99	80.716	Equus_caballus
ENSCLAG00000004127	RNF17	82	66.030	ENSEEUG00000000332	RNF17	90	66.030	Erinaceus_europaeus
ENSCLAG00000004127	RNF17	88	36.054	ENSELUG00000005626	rnf17	87	36.054	Esox_lucius
ENSCLAG00000004127	RNF17	100	79.310	ENSFCAG00000004914	RNF17	100	79.346	Felis_catus
ENSCLAG00000004127	RNF17	88	51.392	ENSFALG00000008766	RNF17	90	52.688	Ficedula_albicollis
ENSCLAG00000004127	RNF17	100	84.475	ENSFDAG00000017857	RNF17	100	84.475	Fukomys_damarensis
ENSCLAG00000004127	RNF17	97	31.813	ENSFHEG00000014822	rnf17	98	31.760	Fundulus_heteroclitus
ENSCLAG00000004127	RNF17	60	35.657	ENSGMOG00000015560	-	97	35.657	Gadus_morhua
ENSCLAG00000004127	RNF17	73	33.056	ENSGAFG00000004463	rnf17	89	33.113	Gambusia_affinis
ENSCLAG00000004127	RNF17	95	52.981	ENSGAGG00000016999	RNF17	97	53.324	Gopherus_agassizii
ENSCLAG00000004127	RNF17	100	76.012	ENSGGOG00000014491	RNF17	100	80.556	Gorilla_gorilla
ENSCLAG00000004127	RNF17	97	31.288	ENSHBUG00000003554	rnf17	98	31.676	Haplochromis_burtoni
ENSCLAG00000004127	RNF17	100	85.905	ENSHGLG00000007270	RNF17	100	85.905	Heterocephalus_glaber_female
ENSCLAG00000004127	RNF17	100	85.905	ENSHGLG00100017393	RNF17	100	85.905	Heterocephalus_glaber_male
ENSCLAG00000004127	RNF17	63	41.304	ENSHCOG00000017676	rnf17	79	41.304	Hippocampus_comes
ENSCLAG00000004127	RNF17	74	36.678	ENSIPUG00000001087	rnf17	79	36.431	Ictalurus_punctatus
ENSCLAG00000004127	RNF17	100	78.021	ENSJJAG00000016584	Rnf17	100	78.021	Jaculus_jaculus
ENSCLAG00000004127	RNF17	97	31.675	ENSKMAG00000013403	rnf17	98	31.675	Kryptolebias_marmoratus
ENSCLAG00000004127	RNF17	88	30.894	ENSLBEG00000014910	rnf17	94	30.575	Labrus_bergylta
ENSCLAG00000004127	RNF17	89	46.492	ENSLACG00000000323	RNF17	100	46.492	Latimeria_chalumnae
ENSCLAG00000004127	RNF17	100	75.060	ENSMFAG00000032388	RNF17	100	77.068	Macaca_fascicularis
ENSCLAG00000004127	RNF17	100	76.208	ENSMMUG00000014610	RNF17	100	80.180	Macaca_mulatta
ENSCLAG00000004127	RNF17	100	75.000	ENSMNEG00000011234	RNF17	100	80.105	Macaca_nemestrina
ENSCLAG00000004127	RNF17	100	74.577	ENSMLEG00000030227	RNF17	100	76.842	Mandrillus_leucophaeus
ENSCLAG00000004127	RNF17	74	34.302	ENSMAMG00000020403	rnf17	86	34.219	Mastacembelus_armatus
ENSCLAG00000004127	RNF17	97	31.307	ENSMZEG00005019166	rnf17	98	31.695	Maylandia_zebra
ENSCLAG00000004127	RNF17	77	50.948	ENSMGAG00000015138	RNF17	99	50.948	Meleagris_gallopavo
ENSCLAG00000004127	RNF17	99	75.000	ENSMAUG00000004788	Rnf17	99	74.787	Mesocricetus_auratus
ENSCLAG00000004127	RNF17	100	79.021	ENSMICG00000010364	RNF17	100	79.021	Microcebus_murinus
ENSCLAG00000004127	RNF17	55	81.221	ENSMOCG00000011818	-	100	81.221	Microtus_ochrogaster
ENSCLAG00000004127	RNF17	74	41.727	ENSMMOG00000019514	rnf17	82	41.727	Mola_mola
ENSCLAG00000004127	RNF17	98	67.508	ENSMODG00000007827	RNF17	99	66.667	Monodelphis_domestica
ENSCLAG00000004127	RNF17	69	36.453	ENSMALG00000016943	rnf17	75	36.453	Monopterus_albus
ENSCLAG00000004127	RNF17	100	76.156	MGP_CAROLIEiJ_G0019337	Rnf17	100	76.156	Mus_caroli
ENSCLAG00000004127	RNF17	100	75.669	ENSMUSG00000000365	Rnf17	100	75.669	Mus_musculus
ENSCLAG00000004127	RNF17	100	76.156	MGP_PahariEiJ_G0030355	Rnf17	100	76.156	Mus_pahari
ENSCLAG00000004127	RNF17	100	75.669	MGP_SPRETEiJ_G0020228	Rnf17	100	75.669	Mus_spretus
ENSCLAG00000004127	RNF17	100	80.024	ENSMPUG00000013305	RNF17	100	80.024	Mustela_putorius_furo
ENSCLAG00000004127	RNF17	100	78.140	ENSMLUG00000003903	RNF17	100	78.200	Myotis_lucifugus
ENSCLAG00000004127	RNF17	100	76.510	ENSNGAG00000013553	Rnf17	100	76.510	Nannospalax_galili
ENSCLAG00000004127	RNF17	74	36.364	ENSNBRG00000012006	rnf17	82	36.080	Neolamprologus_brichardi
ENSCLAG00000004127	RNF17	100	75.136	ENSNLEG00000013780	RNF17	100	80.180	Nomascus_leucogenys
ENSCLAG00000004127	RNF17	67	67.397	ENSMEUG00000003276	-	59	67.397	Notamacropus_eugenii
ENSCLAG00000004127	RNF17	85	69.153	ENSOPRG00000016743	-	88	69.153	Ochotona_princeps
ENSCLAG00000004127	RNF17	53	76.084	ENSODEG00000005443	-	100	76.084	Octodon_degus
ENSCLAG00000004127	RNF17	97	31.493	ENSONIG00000015746	rnf17	99	35.045	Oreochromis_niloticus
ENSCLAG00000004127	RNF17	100	78.944	ENSOCUG00000007384	RNF17	100	78.883	Oryctolagus_cuniculus
ENSCLAG00000004127	RNF17	87	33.036	ENSORLG00000012818	rnf17	98	32.920	Oryzias_latipes
ENSCLAG00000004127	RNF17	97	32.270	ENSORLG00020009879	-	98	32.477	Oryzias_latipes_hni
ENSCLAG00000004127	RNF17	88	34.738	ENSORLG00015013027	-	91	34.897	Oryzias_latipes_hsok
ENSCLAG00000004127	RNF17	67	33.484	ENSOMEG00000009891	rnf17	85	33.846	Oryzias_melastigma
ENSCLAG00000004127	RNF17	100	76.630	ENSOGAG00000014803	RNF17	100	76.630	Otolemur_garnettii
ENSCLAG00000004127	RNF17	98	78.752	ENSOARG00000014641	RNF17	99	78.629	Ovis_aries
ENSCLAG00000004127	RNF17	93	80.180	ENSPPAG00000028779	RNF17	100	80.180	Pan_paniscus
ENSCLAG00000004127	RNF17	100	79.094	ENSPPRG00000009230	RNF17	100	79.198	Panthera_pardus
ENSCLAG00000004127	RNF17	100	79.129	ENSPTIG00000001738	RNF17	100	79.346	Panthera_tigris_altaica
ENSCLAG00000004127	RNF17	100	75.770	ENSPTRG00000005713	RNF17	100	80.105	Pan_troglodytes
ENSCLAG00000004127	RNF17	100	75.030	ENSPANG00000007640	RNF17	100	79.880	Papio_anubis
ENSCLAG00000004127	RNF17	77	36.751	ENSPKIG00000001648	rnf17	90	36.782	Paramormyrops_kingsleyae
ENSCLAG00000004127	RNF17	74	61.248	ENSPSIG00000011245	RNF17	99	61.412	Pelodiscus_sinensis
ENSCLAG00000004127	RNF17	100	77.555	ENSPEMG00000008693	Rnf17	100	77.555	Peromyscus_maniculatus_bairdii
ENSCLAG00000004127	RNF17	69	70.222	ENSPCIG00000009190	-	92	70.222	Phascolarctos_cinereus
ENSCLAG00000004127	RNF17	97	31.515	ENSPFOG00000007124	rnf17	98	31.455	Poecilia_formosa
ENSCLAG00000004127	RNF17	97	31.618	ENSPLAG00000006198	rnf17	98	31.782	Poecilia_latipinna
ENSCLAG00000004127	RNF17	97	31.740	ENSPMEG00000022432	rnf17	98	31.801	Poecilia_mexicana
ENSCLAG00000004127	RNF17	73	32.535	ENSPREG00000001414	rnf17	81	44.203	Poecilia_reticulata
ENSCLAG00000004127	RNF17	100	75.589	ENSPPYG00000005215	RNF17	100	75.589	Pongo_abelii
ENSCLAG00000004127	RNF17	72	81.579	ENSPCAG00000002665	RNF17	76	81.579	Procavia_capensis
ENSCLAG00000004127	RNF17	91	60.000	ENSPCOG00000020211	RNF17	100	56.535	Propithecus_coquereli
ENSCLAG00000004127	RNF17	100	67.685	ENSPVAG00000013021	RNF17	100	67.685	Pteropus_vampyrus
ENSCLAG00000004127	RNF17	82	38.377	ENSPNAG00000027505	rnf17	95	33.361	Pygocentrus_nattereri
ENSCLAG00000004127	RNF17	100	75.852	ENSRNOG00000008059	Rnf17	100	75.852	Rattus_norvegicus
ENSCLAG00000004127	RNF17	100	73.624	ENSRBIG00000027010	RNF17	100	76.298	Rhinopithecus_bieti
ENSCLAG00000004127	RNF17	100	74.320	ENSRROG00000022801	RNF17	99	79.414	Rhinopithecus_roxellana
ENSCLAG00000004127	RNF17	99	74.207	ENSSBOG00000021661	RNF17	99	76.226	Saimiri_boliviensis_boliviensis
ENSCLAG00000004127	RNF17	98	67.958	ENSSHAG00000005609	RNF17	99	67.958	Sarcophilus_harrisii
ENSCLAG00000004127	RNF17	68	48.485	ENSSFOG00015023037	rnf17	89	47.500	Scleropages_formosus
ENSCLAG00000004127	RNF17	86	30.657	ENSSMAG00000007429	rnf17	74	33.511	Scophthalmus_maximus
ENSCLAG00000004127	RNF17	88	31.464	ENSSDUG00000013530	rnf17	97	31.336	Seriola_dumerili
ENSCLAG00000004127	RNF17	88	31.511	ENSSLDG00000019577	rnf17	75	34.775	Seriola_lalandi_dorsalis
ENSCLAG00000004127	RNF17	100	72.082	ENSSARG00000003016	RNF17	94	72.082	Sorex_araneus
ENSCLAG00000004127	RNF17	87	56.718	ENSSPUG00000008917	RNF17	94	56.718	Sphenodon_punctatus
ENSCLAG00000004127	RNF17	69	34.254	ENSSPAG00000001925	rnf17	76	34.570	Stegastes_partitus
ENSCLAG00000004127	RNF17	100	73.503	ENSSSCG00000009572	RNF17	98	78.320	Sus_scrofa
ENSCLAG00000004127	RNF17	66	54.427	ENSTGUG00000011267	-	100	54.427	Taeniopygia_guttata
ENSCLAG00000004127	RNF17	56	53.288	ENSTGUG00000011272	-	100	53.273	Taeniopygia_guttata
ENSCLAG00000004127	RNF17	97	30.405	ENSTRUG00000015498	rnf17	77	33.550	Takifugu_rubripes
ENSCLAG00000004127	RNF17	74	33.416	ENSTNIG00000015681	rnf17	100	33.498	Tetraodon_nigroviridis
ENSCLAG00000004127	RNF17	96	66.153	ENSTBEG00000000282	RNF17	95	65.617	Tupaia_belangeri
ENSCLAG00000004127	RNF17	99	70.542	ENSTTRG00000012698	RNF17	99	70.521	Tursiops_truncatus
ENSCLAG00000004127	RNF17	90	90.141	ENSVPAG00000011388	RNF17	85	90.141	Vicugna_pacos
ENSCLAG00000004127	RNF17	95	85.330	ENSVVUG00000006226	RNF17	100	85.330	Vulpes_vulpes
ENSCLAG00000004127	RNF17	71	41.817	ENSXETG00000034020	RNF17	100	44.153	Xenopus_tropicalis
ENSCLAG00000004127	RNF17	87	30.330	ENSXCOG00000018295	rnf17	76	34.050	Xiphophorus_couchianus
ENSCLAG00000004127	RNF17	87	30.645	ENSXMAG00000014747	rnf17	77	34.201	Xiphophorus_maculatus