EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000004197 (Gene tree)
Gene ID: 102005489
Gene Symbol: ZMAT1
Alias: KIAA1789
Full Name: zinc finger matrin-type 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 46101 bases
Position: chrJH721963.1:8031434-8077534
Accession: 102005489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005922	zf-met	PF12874.7	2.4e-11	1	3
ENSCLAP00000005922	zf-met	PF12874.7	2.4e-11	2	3
ENSCLAP00000005922	zf-met	PF12874.7	2.4e-11	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000006024	ZMAT1-201	5300	XM_005406977	ENSCLAP00000005922	617 (aa)	XP_005407034	UPI0006974E0C

Gene Model

Click here to download ENSCLAG00000004197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004197	ZMAT1	97	61.028	ENSG00000166432	ZMAT1	94	61.526	Homo_sapiens
ENSCLAG00000004197	ZMAT1	97	60.862	ENSAMEG00000004976	ZMAT1	100	62.205	Ailuropoda_melanoleuca
ENSCLAG00000004197	ZMAT1	97	59.370	ENSANAG00000028725	ZMAT1	100	59.370	Aotus_nancymaae
ENSCLAG00000004197	ZMAT1	100	51.316	ENSBTAG00000003601	ZMAT1	100	56.038	Bos_taurus
ENSCLAG00000004197	ZMAT1	97	58.043	ENSCJAG00000019724	ZMAT1	100	58.541	Callithrix_jacchus
ENSCLAG00000004197	ZMAT1	97	60.697	ENSCAFG00000017730	ZMAT1	100	60.697	Canis_familiaris
ENSCLAG00000004197	ZMAT1	75	60.510	ENSCAFG00020007319	ZMAT1	99	60.510	Canis_lupus_dingo
ENSCLAG00000004197	ZMAT1	75	58.140	ENSCHIG00000010507	ZMAT1	99	58.140	Capra_hircus
ENSCLAG00000004197	ZMAT1	96	58.361	ENSTSYG00000007330	ZMAT1	99	58.863	Carlito_syrichta
ENSCLAG00000004197	ZMAT1	96	63.802	ENSCPOG00000000581	ZMAT1	97	63.802	Cavia_porcellus
ENSCLAG00000004197	ZMAT1	97	58.541	ENSCCAG00000023924	ZMAT1	100	59.038	Cebus_capucinus
ENSCLAG00000004197	ZMAT1	100	58.758	ENSCATG00000000551	ZMAT1	98	60.596	Cercocebus_atys
ENSCLAG00000004197	ZMAT1	100	58.333	ENSCSAG00000009795	ZMAT1	90	58.796	Chlorocebus_sabaeus
ENSCLAG00000004197	ZMAT1	96	78.788	ENSCPBG00000001356	ZMAT1	86	75.000	Chrysemys_picta_bellii
ENSCLAG00000004197	ZMAT1	96	59.867	ENSCANG00000037194	ZMAT1	100	60.365	Colobus_angolensis_palliatus
ENSCLAG00000004197	ZMAT1	100	50.696	ENSCGRG00001023697	Zmat1	100	50.696	Cricetulus_griseus_chok1gshd
ENSCLAG00000004197	ZMAT1	97	50.160	ENSCGRG00000001964	Zmat1	99	50.160	Cricetulus_griseus_crigri
ENSCLAG00000004197	ZMAT1	91	55.712	ENSDNOG00000014852	-	100	55.185	Dasypus_novemcinctus
ENSCLAG00000004197	ZMAT1	75	46.362	ENSDNOG00000044924	-	98	46.362	Dasypus_novemcinctus
ENSCLAG00000004197	ZMAT1	100	54.432	ENSDORG00000006821	Zmat1	100	54.432	Dipodomys_ordii
ENSCLAG00000004197	ZMAT1	96	45.546	ENSETEG00000020259	ZMAT1	99	45.546	Echinops_telfairi
ENSCLAG00000004197	ZMAT1	96	57.525	ENSEASG00005014185	ZMAT1	93	57.692	Equus_asinus_asinus
ENSCLAG00000004197	ZMAT1	100	61.218	ENSECAG00000013390	ZMAT1	99	61.359	Equus_caballus
ENSCLAG00000004197	ZMAT1	96	62.602	ENSFCAG00000023394	ZMAT1	99	62.602	Felis_catus
ENSCLAG00000004197	ZMAT1	99	64.563	ENSFDAG00000004063	ZMAT1	96	64.687	Fukomys_damarensis
ENSCLAG00000004197	ZMAT1	96	37.651	ENSGAGG00000002326	ZMAT1	100	37.612	Gopherus_agassizii
ENSCLAG00000004197	ZMAT1	97	61.028	ENSGGOG00000025784	ZMAT1	95	61.258	Gorilla_gorilla
ENSCLAG00000004197	ZMAT1	100	64.459	ENSHGLG00000002494	ZMAT1	100	64.459	Heterocephalus_glaber_female
ENSCLAG00000004197	ZMAT1	100	66.246	ENSHGLG00100004968	ZMAT1	100	66.246	Heterocephalus_glaber_male
ENSCLAG00000004197	ZMAT1	86	62.970	ENSSTOG00000011140	ZMAT1	100	63.128	Ictidomys_tridecemlineatus
ENSCLAG00000004197	ZMAT1	100	48.297	ENSJJAG00000020188	Zmat1	100	48.762	Jaculus_jaculus
ENSCLAG00000004197	ZMAT1	91	48.179	ENSLAFG00000015656	ZMAT1	100	48.841	Loxodonta_africana
ENSCLAG00000004197	ZMAT1	85	58.034	ENSMFAG00000042343	ZMAT1	90	58.034	Macaca_fascicularis
ENSCLAG00000004197	ZMAT1	100	58.488	ENSMMUG00000002151	ZMAT1	100	58.951	Macaca_mulatta
ENSCLAG00000004197	ZMAT1	100	58.333	ENSMNEG00000036310	ZMAT1	95	60.430	Macaca_nemestrina
ENSCLAG00000004197	ZMAT1	97	59.768	ENSMLEG00000005031	ZMAT1	95	60.265	Mandrillus_leucophaeus
ENSCLAG00000004197	ZMAT1	100	50.541	ENSMAUG00000002941	Zmat1	100	50.541	Mesocricetus_auratus
ENSCLAG00000004197	ZMAT1	96	61.065	ENSMICG00000003313	ZMAT1	100	61.398	Microcebus_murinus
ENSCLAG00000004197	ZMAT1	100	51.360	ENSMOCG00000000169	Zmat1	100	50.880	Microtus_ochrogaster
ENSCLAG00000004197	ZMAT1	100	48.382	ENSMUSG00000052676	Zmat1	100	48.382	Mus_musculus
ENSCLAG00000004197	ZMAT1	100	47.920	MGP_PahariEiJ_G0031943	Zmat1	100	47.920	Mus_pahari
ENSCLAG00000004197	ZMAT1	100	48.154	MGP_SPRETEiJ_G0034567	Zmat1	100	48.154	Mus_spretus
ENSCLAG00000004197	ZMAT1	96	50.732	ENSMPUG00000002130	ZMAT1	99	50.891	Mustela_putorius_furo
ENSCLAG00000004197	ZMAT1	97	55.207	ENSMLUG00000004417	ZMAT1	100	55.372	Myotis_lucifugus
ENSCLAG00000004197	ZMAT1	100	52.705	ENSNGAG00000006608	Zmat1	100	53.014	Nannospalax_galili
ENSCLAG00000004197	ZMAT1	97	57.143	ENSNLEG00000030520	ZMAT1	94	56.977	Nomascus_leucogenys
ENSCLAG00000004197	ZMAT1	65	52.709	ENSOPRG00000009950	-	99	52.709	Ochotona_princeps
ENSCLAG00000004197	ZMAT1	84	60.465	ENSOCUG00000004164	ZMAT1	93	60.465	Oryctolagus_cuniculus
ENSCLAG00000004197	ZMAT1	97	60.199	ENSOGAG00000033601	ZMAT1	100	60.199	Otolemur_garnettii
ENSCLAG00000004197	ZMAT1	96	58.403	ENSOARG00000001897	ZMAT1	99	58.403	Ovis_aries
ENSCLAG00000004197	ZMAT1	97	61.360	ENSPPAG00000039554	ZMAT1	95	61.653	Pan_paniscus
ENSCLAG00000004197	ZMAT1	96	57.596	ENSPPRG00000005258	ZMAT1	99	57.763	Panthera_pardus
ENSCLAG00000004197	ZMAT1	96	57.429	ENSPTIG00000019057	ZMAT1	99	57.596	Panthera_tigris_altaica
ENSCLAG00000004197	ZMAT1	100	59.351	ENSPTRG00000041840	ZMAT1	95	61.488	Pan_troglodytes
ENSCLAG00000004197	ZMAT1	100	51.852	ENSPEMG00000009944	Zmat1	100	51.852	Peromyscus_maniculatus_bairdii
ENSCLAG00000004197	ZMAT1	97	58.140	ENSPPYG00000020561	ZMAT1	93	58.638	Pongo_abelii
ENSCLAG00000004197	ZMAT1	96	51.424	ENSPCAG00000010283	ZMAT1	99	51.089	Procavia_capensis
ENSCLAG00000004197	ZMAT1	96	61.028	ENSPCOG00000021386	ZMAT1	100	61.028	Propithecus_coquereli
ENSCLAG00000004197	ZMAT1	96	57.956	ENSPVAG00000013206	ZMAT1	99	57.956	Pteropus_vampyrus
ENSCLAG00000004197	ZMAT1	100	48.377	ENSRNOG00000024135	Zmat1	100	48.302	Rattus_norvegicus
ENSCLAG00000004197	ZMAT1	94	59.966	ENSRBIG00000034121	ZMAT1	93	60.477	Rhinopithecus_bieti
ENSCLAG00000004197	ZMAT1	97	60.099	ENSRROG00000036747	ZMAT1	94	60.596	Rhinopithecus_roxellana
ENSCLAG00000004197	ZMAT1	97	60.033	ENSSBOG00000029970	ZMAT1	100	59.701	Saimiri_boliviensis_boliviensis
ENSCLAG00000004197	ZMAT1	94	46.957	ENSSHAG00000011087	-	100	46.957	Sarcophilus_harrisii
ENSCLAG00000004197	ZMAT1	57	48.701	ENSSARG00000003063	-	60	48.701	Sorex_araneus
ENSCLAG00000004197	ZMAT1	87	44.882	ENSSPUG00000004951	ZMAT1	85	44.882	Sphenodon_punctatus
ENSCLAG00000004197	ZMAT1	96	58.039	ENSSSCG00000012512	ZMAT1	99	60.934	Sus_scrofa
ENSCLAG00000004197	ZMAT1	91	57.496	ENSTBEG00000012967	ZMAT1	100	57.496	Tupaia_belangeri
ENSCLAG00000004197	ZMAT1	96	60.535	ENSTTRG00000016662	ZMAT1	99	61.037	Tursiops_truncatus
ENSCLAG00000004197	ZMAT1	75	61.146	ENSUAMG00000015209	ZMAT1	99	61.146	Ursus_americanus
ENSCLAG00000004197	ZMAT1	75	61.146	ENSUMAG00000000627	ZMAT1	99	61.146	Ursus_maritimus
ENSCLAG00000004197	ZMAT1	96	60.601	ENSVPAG00000006267	ZMAT1	99	60.768	Vicugna_pacos
ENSCLAG00000004197	ZMAT1	100	59.196	ENSVVUG00000005342	ZMAT1	90	59.196	Vulpes_vulpes
ENSCLAG00000004197	ZMAT1	60	39.344	ENSXETG00000001949	krcc1	99	31.831	Xenopus_tropicalis