EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000004206 (Gene tree)
Gene ID: 102027862
Gene Symbol: SHQ1
Alias: FLJ10539|Shq1p
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 98877 bases
Position: chrJH721881.1:15358221-15457097
Accession: 102027862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000005936	SHQ1	PF04925.15	5.8e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000006038	SHQ1-201	4304	XM_005383768	ENSCLAP00000005936	578 (aa)	XP_005383825	UPI00038ECA5A

Gene Model

Click here to download ENSCLAG00000004206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004206	SHQ1	99	77.625	ENSG00000144736	SHQ1	96	93.750	Homo_sapiens
ENSCLAG00000004206	SHQ1	75	61.785	ENSAPOG00000000397	shq1	94	51.661	Acanthochromis_polyacanthus
ENSCLAG00000004206	SHQ1	98	78.472	ENSAMEG00000015140	SHQ1	98	78.683	Ailuropoda_melanoleuca
ENSCLAG00000004206	SHQ1	75	60.690	ENSACIG00000021249	shq1	71	60.690	Amphilophus_citrinellus
ENSCLAG00000004206	SHQ1	75	63.387	ENSAOCG00000023311	shq1	94	52.805	Amphiprion_ocellaris
ENSCLAG00000004206	SHQ1	75	62.700	ENSAPEG00000021686	shq1	94	52.462	Amphiprion_percula
ENSCLAG00000004206	SHQ1	75	62.243	ENSATEG00000008475	shq1	89	53.455	Anabas_testudineus
ENSCLAG00000004206	SHQ1	78	65.333	ENSAPLG00000013926	SHQ1	89	65.563	Anas_platyrhynchos
ENSCLAG00000004206	SHQ1	74	69.231	ENSACAG00000014809	SHQ1	84	59.930	Anolis_carolinensis
ENSCLAG00000004206	SHQ1	97	61.228	ENSANAG00000030500	-	98	59.825	Aotus_nancymaae
ENSCLAG00000004206	SHQ1	97	78.772	ENSANAG00000029241	SHQ1	97	77.368	Aotus_nancymaae
ENSCLAG00000004206	SHQ1	76	59.417	ENSACLG00000023077	shq1	74	55.696	Astatotilapia_calliptera
ENSCLAG00000004206	SHQ1	75	54.861	ENSAMXG00000043822	shq1	74	55.734	Astyanax_mexicanus
ENSCLAG00000004206	SHQ1	99	76.552	ENSBTAG00000005436	SHQ1	99	75.212	Bos_taurus
ENSCLAG00000004206	SHQ1	74	34.467	WBGene00021655	Y48A5A.1	92	34.048	Caenorhabditis_elegans
ENSCLAG00000004206	SHQ1	98	75.567	ENSCJAG00000015131	SHQ1	98	75.174	Callithrix_jacchus
ENSCLAG00000004206	SHQ1	98	78.683	ENSCAFG00000006434	SHQ1	98	79.723	Canis_familiaris
ENSCLAG00000004206	SHQ1	98	78.510	ENSCAFG00020016743	SHQ1	98	79.549	Canis_lupus_dingo
ENSCLAG00000004206	SHQ1	99	76.724	ENSCHIG00000012271	SHQ1	90	76.460	Capra_hircus
ENSCLAG00000004206	SHQ1	99	72.366	ENSTSYG00000014439	SHQ1	99	72.931	Carlito_syrichta
ENSCLAG00000004206	SHQ1	92	71.751	ENSCAPG00000009343	SHQ1	98	96.753	Cavia_aperea
ENSCLAG00000004206	SHQ1	100	83.447	ENSCPOG00000011443	SHQ1	100	85.324	Cavia_porcellus
ENSCLAG00000004206	SHQ1	99	66.495	ENSCCAG00000027080	SHQ1	97	66.667	Cebus_capucinus
ENSCLAG00000004206	SHQ1	98	60.522	ENSCCAG00000036087	-	98	58.783	Cebus_capucinus
ENSCLAG00000004206	SHQ1	99	77.029	ENSCATG00000041238	SHQ1	98	77.241	Cercocebus_atys
ENSCLAG00000004206	SHQ1	84	72.449	ENSCSAG00000011514	SHQ1	98	72.709	Chlorocebus_sabaeus
ENSCLAG00000004206	SHQ1	50	96.667	ENSCHOG00000003273	-	100	72.464	Choloepus_hoffmanni
ENSCLAG00000004206	SHQ1	78	70.222	ENSCPBG00000006441	SHQ1	93	60.690	Chrysemys_picta_bellii
ENSCLAG00000004206	SHQ1	70	42.381	ENSCING00000008013	-	89	41.787	Ciona_intestinalis
ENSCLAG00000004206	SHQ1	69	44.110	ENSCSAVG00000002332	-	99	42.035	Ciona_savignyi
ENSCLAG00000004206	SHQ1	99	77.797	ENSCANG00000039295	SHQ1	99	77.069	Colobus_angolensis_palliatus
ENSCLAG00000004206	SHQ1	99	75.521	ENSCGRG00001012583	Shq1	98	84.836	Cricetulus_griseus_chok1gshd
ENSCLAG00000004206	SHQ1	99	75.521	ENSCGRG00000009849	Shq1	98	84.836	Cricetulus_griseus_crigri
ENSCLAG00000004206	SHQ1	72	61.962	ENSCSEG00000007829	shq1	92	53.713	Cynoglossus_semilaevis
ENSCLAG00000004206	SHQ1	75	61.556	ENSCVAG00000020049	shq1	95	51.646	Cyprinodon_variegatus
ENSCLAG00000004206	SHQ1	75	59.725	ENSDARG00000058522	shq1	69	59.518	Danio_rerio
ENSCLAG00000004206	SHQ1	99	75.433	ENSDNOG00000033937	SHQ1	99	75.731	Dasypus_novemcinctus
ENSCLAG00000004206	SHQ1	99	64.510	ENSETEG00000005766	SHQ1	98	65.096	Echinops_telfairi
ENSCLAG00000004206	SHQ1	65	48.138	ENSEBUG00000005445	shq1	72	49.693	Eptatretus_burgeri
ENSCLAG00000004206	SHQ1	98	79.167	ENSEASG00005002237	SHQ1	98	79.203	Equus_asinus_asinus
ENSCLAG00000004206	SHQ1	100	77.419	ENSECAG00000015673	SHQ1	95	79.371	Equus_caballus
ENSCLAG00000004206	SHQ1	99	73.657	ENSEEUG00000010568	SHQ1	98	75.910	Erinaceus_europaeus
ENSCLAG00000004206	SHQ1	72	61.111	ENSELUG00000003476	shq1	92	52.604	Esox_lucius
ENSCLAG00000004206	SHQ1	98	78.049	ENSFCAG00000012781	SHQ1	98	77.700	Felis_catus
ENSCLAG00000004206	SHQ1	99	58.304	ENSFALG00000013428	SHQ1	94	58.854	Ficedula_albicollis
ENSCLAG00000004206	SHQ1	100	81.544	ENSFDAG00000005595	SHQ1	92	81.208	Fukomys_damarensis
ENSCLAG00000004206	SHQ1	75	60.731	ENSFHEG00000017552	shq1	93	52.398	Fundulus_heteroclitus
ENSCLAG00000004206	SHQ1	69	58.438	ENSGMOG00000007350	shq1	100	58.438	Gadus_morhua
ENSCLAG00000004206	SHQ1	99	58.276	ENSGALG00000007798	SHQ1	93	58.003	Gallus_gallus
ENSCLAG00000004206	SHQ1	69	59.698	ENSGACG00000011797	shq1	100	58.438	Gasterosteus_aculeatus
ENSCLAG00000004206	SHQ1	99	77.108	ENSGGOG00000034818	SHQ1	99	76.460	Gorilla_gorilla
ENSCLAG00000004206	SHQ1	75	59.817	ENSHBUG00000010857	shq1	73	59.101	Haplochromis_burtoni
ENSCLAG00000004206	SHQ1	100	85.424	ENSHGLG00000003637	SHQ1	91	85.424	Heterocephalus_glaber_female
ENSCLAG00000004206	SHQ1	100	85.714	ENSHGLG00100011957	SHQ1	91	85.714	Heterocephalus_glaber_male
ENSCLAG00000004206	SHQ1	94	50.916	ENSHCOG00000010799	shq1	74	58.333	Hippocampus_comes
ENSCLAG00000004206	SHQ1	78	57.522	ENSIPUG00000001247	shq1	76	57.428	Ictalurus_punctatus
ENSCLAG00000004206	SHQ1	99	72.329	ENSSTOG00000010043	SHQ1	100	72.855	Ictidomys_tridecemlineatus
ENSCLAG00000004206	SHQ1	99	74.784	ENSJJAG00000017611	Shq1	98	84.426	Jaculus_jaculus
ENSCLAG00000004206	SHQ1	97	54.433	ENSKMAG00000004457	shq1	94	52.522	Kryptolebias_marmoratus
ENSCLAG00000004206	SHQ1	77	66.890	ENSLACG00000014243	SHQ1	85	57.848	Latimeria_chalumnae
ENSCLAG00000004206	SHQ1	99	54.878	ENSLOCG00000009970	shq1	97	54.688	Lepisosteus_oculatus
ENSCLAG00000004206	SHQ1	99	55.401	ENSMFAG00000037396	-	98	54.861	Macaca_fascicularis
ENSCLAG00000004206	SHQ1	99	76.857	ENSMFAG00000039148	SHQ1	98	77.069	Macaca_fascicularis
ENSCLAG00000004206	SHQ1	99	55.226	ENSMMUG00000021761	-	98	54.688	Macaca_mulatta
ENSCLAG00000004206	SHQ1	91	75.141	ENSMMUG00000009571	SHQ1	95	75.376	Macaca_mulatta
ENSCLAG00000004206	SHQ1	99	76.857	ENSMNEG00000032667	SHQ1	98	77.069	Macaca_nemestrina
ENSCLAG00000004206	SHQ1	99	76.857	ENSMLEG00000038493	SHQ1	98	77.069	Mandrillus_leucophaeus
ENSCLAG00000004206	SHQ1	76	60.998	ENSMAMG00000023432	shq1	67	60.998	Mastacembelus_armatus
ENSCLAG00000004206	SHQ1	75	60.046	ENSMZEG00005008649	shq1	73	59.326	Maylandia_zebra
ENSCLAG00000004206	SHQ1	99	58.885	ENSMGAG00000009640	SHQ1	93	59.722	Meleagris_gallopavo
ENSCLAG00000004206	SHQ1	99	75.694	ENSMAUG00000022030	Shq1	98	84.836	Mesocricetus_auratus
ENSCLAG00000004206	SHQ1	99	76.976	ENSMICG00000009224	SHQ1	98	76.552	Microcebus_murinus
ENSCLAG00000004206	SHQ1	99	73.868	ENSMOCG00000017836	Shq1	98	83.607	Microtus_ochrogaster
ENSCLAG00000004206	SHQ1	75	60.920	ENSMMOG00000010569	shq1	69	59.903	Mola_mola
ENSCLAG00000004206	SHQ1	95	63.571	ENSMODG00000003926	SHQ1	98	62.281	Monodelphis_domestica
ENSCLAG00000004206	SHQ1	100	53.152	ENSMALG00000008870	shq1	75	60.965	Monopterus_albus
ENSCLAG00000004206	SHQ1	90	83.607	MGP_CAROLIEiJ_G0028689	Shq1	98	83.607	Mus_caroli
ENSCLAG00000004206	SHQ1	99	73.958	ENSMUSG00000035378	Shq1	98	83.607	Mus_musculus
ENSCLAG00000004206	SHQ1	99	73.958	MGP_PahariEiJ_G0022440	Shq1	98	84.836	Mus_pahari
ENSCLAG00000004206	SHQ1	99	74.048	MGP_SPRETEiJ_G0029717	Shq1	98	83.197	Mus_spretus
ENSCLAG00000004206	SHQ1	98	77.643	ENSMPUG00000017006	SHQ1	96	77.816	Mustela_putorius_furo
ENSCLAG00000004206	SHQ1	91	70.686	ENSMLUG00000013539	SHQ1	98	72.472	Myotis_lucifugus
ENSCLAG00000004206	SHQ1	99	68.739	ENSNGAG00000023317	Shq1	100	68.048	Nannospalax_galili
ENSCLAG00000004206	SHQ1	61	57.983	ENSNBRG00000024004	shq1	68	57.865	Neolamprologus_brichardi
ENSCLAG00000004206	SHQ1	98	78.720	ENSNLEG00000002731	SHQ1	98	77.375	Nomascus_leucogenys
ENSCLAG00000004206	SHQ1	74	65.741	ENSMEUG00000009350	-	89	65.741	Notamacropus_eugenii
ENSCLAG00000004206	SHQ1	100	79.725	ENSODEG00000009192	SHQ1	99	89.669	Octodon_degus
ENSCLAG00000004206	SHQ1	76	59.641	ENSONIG00000020264	shq1	94	51.890	Oreochromis_niloticus
ENSCLAG00000004206	SHQ1	99	76.990	ENSOCUG00000016695	SHQ1	98	76.817	Oryctolagus_cuniculus
ENSCLAG00000004206	SHQ1	75	60.277	ENSORLG00000023538	shq1	80	58.166	Oryzias_latipes
ENSCLAG00000004206	SHQ1	75	60.970	ENSORLG00020003697	shq1	79	58.837	Oryzias_latipes_hni
ENSCLAG00000004206	SHQ1	75	60.880	ENSORLG00015021040	shq1	78	60.092	Oryzias_latipes_hsok
ENSCLAG00000004206	SHQ1	75	60.648	ENSOMEG00000001225	shq1	74	60.723	Oryzias_melastigma
ENSCLAG00000004206	SHQ1	99	77.702	ENSOGAG00000003898	SHQ1	100	77.358	Otolemur_garnettii
ENSCLAG00000004206	SHQ1	99	74.829	ENSOARG00000009547	SHQ1	99	75.639	Ovis_aries
ENSCLAG00000004206	SHQ1	99	77.625	ENSPPAG00000027714	SHQ1	99	76.976	Pan_paniscus
ENSCLAG00000004206	SHQ1	99	58.219	ENSPPAG00000043263	-	98	56.849	Pan_paniscus
ENSCLAG00000004206	SHQ1	98	78.683	ENSPPRG00000004769	SHQ1	98	78.336	Panthera_pardus
ENSCLAG00000004206	SHQ1	98	74.177	ENSPTIG00000011478	SHQ1	98	73.830	Panthera_tigris_altaica
ENSCLAG00000004206	SHQ1	99	77.625	ENSPTRG00000015106	SHQ1	98	77.241	Pan_troglodytes
ENSCLAG00000004206	SHQ1	99	57.534	ENSPTRG00000048303	-	98	56.164	Pan_troglodytes
ENSCLAG00000004206	SHQ1	99	76.166	ENSPANG00000002881	SHQ1	98	77.414	Papio_anubis
ENSCLAG00000004206	SHQ1	74	58.837	ENSPKIG00000021517	shq1	72	58.937	Paramormyrops_kingsleyae
ENSCLAG00000004206	SHQ1	77	70.312	ENSPSIG00000005536	SHQ1	93	60.172	Pelodiscus_sinensis
ENSCLAG00000004206	SHQ1	76	57.692	ENSPMGG00000008838	shq1	75	57.238	Periophthalmus_magnuspinnatus
ENSCLAG00000004206	SHQ1	99	76.430	ENSPEMG00000000251	Shq1	98	84.426	Peromyscus_maniculatus_bairdii
ENSCLAG00000004206	SHQ1	76	55.011	ENSPMAG00000005372	shq1	99	55.234	Petromyzon_marinus
ENSCLAG00000004206	SHQ1	75	59.909	ENSPFOG00000003118	shq1	81	59.020	Poecilia_formosa
ENSCLAG00000004206	SHQ1	60	57.759	ENSPMEG00000011076	shq1	77	56.704	Poecilia_mexicana
ENSCLAG00000004206	SHQ1	69	55.637	ENSPREG00000000591	shq1	78	55.825	Poecilia_reticulata
ENSCLAG00000004206	SHQ1	99	76.936	ENSPPYG00000013717	SHQ1	99	76.460	Pongo_abelii
ENSCLAG00000004206	SHQ1	96	75.089	ENSPCAG00000009035	SHQ1	99	74.870	Procavia_capensis
ENSCLAG00000004206	SHQ1	99	75.815	ENSPCOG00000008415	SHQ1	99	77.015	Propithecus_coquereli
ENSCLAG00000004206	SHQ1	99	77.835	ENSPVAG00000017392	SHQ1	99	77.702	Pteropus_vampyrus
ENSCLAG00000004206	SHQ1	76	59.417	ENSPNYG00000003878	shq1	72	59.326	Pundamilia_nyererei
ENSCLAG00000004206	SHQ1	75	60.138	ENSPNAG00000026840	shq1	90	52.373	Pygocentrus_nattereri
ENSCLAG00000004206	SHQ1	99	70.936	ENSRNOG00000005433	Shq1	99	70.772	Rattus_norvegicus
ENSCLAG00000004206	SHQ1	99	74.227	ENSRBIG00000026280	SHQ1	99	74.355	Rhinopithecus_bieti
ENSCLAG00000004206	SHQ1	99	77.625	ENSRROG00000034126	SHQ1	99	77.069	Rhinopithecus_roxellana
ENSCLAG00000004206	SHQ1	98	68.641	ENSSBOG00000021038	SHQ1	98	69.391	Saimiri_boliviensis_boliviensis
ENSCLAG00000004206	SHQ1	96	64.273	ENSSHAG00000015077	SHQ1	97	63.849	Sarcophilus_harrisii
ENSCLAG00000004206	SHQ1	77	62.332	ENSSFOG00015016241	shq1	80	62.332	Scleropages_formosus
ENSCLAG00000004206	SHQ1	76	61.851	ENSSMAG00000016151	shq1	91	50.166	Scophthalmus_maximus
ENSCLAG00000004206	SHQ1	75	63.510	ENSSDUG00000011986	shq1	70	63.616	Seriola_dumerili
ENSCLAG00000004206	SHQ1	72	61.836	ENSSLDG00000013908	shq1	71	62.557	Seriola_lalandi_dorsalis
ENSCLAG00000004206	SHQ1	99	61.632	ENSSARG00000007119	SHQ1	98	60.069	Sorex_araneus
ENSCLAG00000004206	SHQ1	83	57.526	ENSSPUG00000011526	-	90	58.351	Sphenodon_punctatus
ENSCLAG00000004206	SHQ1	99	75.559	ENSSSCG00000011518	SHQ1	99	75.773	Sus_scrofa
ENSCLAG00000004206	SHQ1	99	57.931	ENSTGUG00000009933	SHQ1	99	58.752	Taeniopygia_guttata
ENSCLAG00000004206	SHQ1	72	57.416	ENSTRUG00000009446	shq1	74	57.788	Takifugu_rubripes
ENSCLAG00000004206	SHQ1	72	58.173	ENSTNIG00000007354	shq1	95	58.676	Tetraodon_nigroviridis
ENSCLAG00000004206	SHQ1	78	93.617	ENSTBEG00000011295	SHQ1	78	93.617	Tupaia_belangeri
ENSCLAG00000004206	SHQ1	98	76.522	ENSTTRG00000005320	SHQ1	98	76.696	Tursiops_truncatus
ENSCLAG00000004206	SHQ1	98	74.913	ENSUMAG00000024031	SHQ1	98	76.215	Ursus_maritimus
ENSCLAG00000004206	SHQ1	90	67.985	ENSVPAG00000004880	SHQ1	98	67.857	Vicugna_pacos
ENSCLAG00000004206	SHQ1	98	78.336	ENSVVUG00000013906	SHQ1	98	79.376	Vulpes_vulpes
ENSCLAG00000004206	SHQ1	77	66.817	ENSXETG00000032215	shq1	72	66.667	Xenopus_tropicalis