EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000004449 (Gene tree)
Gene ID: 102022472
Gene Symbol: POLR2D
Alias: RBP4
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 9597 bases
Position: chrJH721919.1:2686792-2696388
Accession: 102022472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000006291	RNA_pol_Rpb4	PF03874.16	4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000006395	POLR2D-201	1208	XM_005397575	ENSCLAP00000006291	142 (aa)	XP_005397632	UPI0001ECFFD8

Gene Model

Click here to download ENSCLAG00000004449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004449	POLR2D	100	99.296	ENSG00000144231	POLR2D	100	99.296	Homo_sapiens
ENSCLAG00000004449	POLR2D	100	89.583	ENSAPOG00000023553	polr2d	100	89.583	Acanthochromis_polyacanthus
ENSCLAG00000004449	POLR2D	100	97.917	ENSAMEG00000011746	POLR2D	100	97.917	Ailuropoda_melanoleuca
ENSCLAG00000004449	POLR2D	100	89.583	ENSAOCG00000007295	polr2d	100	89.583	Amphiprion_ocellaris
ENSCLAG00000004449	POLR2D	100	89.583	ENSAPEG00000018714	polr2d	100	89.583	Amphiprion_percula
ENSCLAG00000004449	POLR2D	100	90.278	ENSATEG00000020416	polr2d	100	90.278	Anabas_testudineus
ENSCLAG00000004449	POLR2D	100	95.775	ENSACAG00000005255	POLR2D	100	95.775	Anolis_carolinensis
ENSCLAG00000004449	POLR2D	100	99.296	ENSANAG00000019959	POLR2D	100	99.296	Aotus_nancymaae
ENSCLAG00000004449	POLR2D	100	89.583	ENSACLG00000009919	polr2d	100	69.444	Astatotilapia_calliptera
ENSCLAG00000004449	POLR2D	94	93.985	ENSAMXG00000008954	polr2d	100	89.510	Astyanax_mexicanus
ENSCLAG00000004449	POLR2D	100	98.592	ENSBTAG00000053244	POLR2D	100	98.592	Bos_taurus
ENSCLAG00000004449	POLR2D	99	56.944	WBGene00018391	rpb-4	100	56.944	Caenorhabditis_elegans
ENSCLAG00000004449	POLR2D	100	99.296	ENSCJAG00000042216	-	100	99.296	Callithrix_jacchus
ENSCLAG00000004449	POLR2D	100	98.592	ENSCJAG00000021814	-	100	98.592	Callithrix_jacchus
ENSCLAG00000004449	POLR2D	100	99.296	ENSCAFG00000004311	POLR2D	100	99.296	Canis_familiaris
ENSCLAG00000004449	POLR2D	100	99.296	ENSCAFG00020003617	POLR2D	100	99.296	Canis_lupus_dingo
ENSCLAG00000004449	POLR2D	100	97.887	ENSCHIG00000025995	POLR2D	100	97.887	Capra_hircus
ENSCLAG00000004449	POLR2D	82	98.291	ENSTSYG00000036021	POLR2D	100	98.291	Carlito_syrichta
ENSCLAG00000004449	POLR2D	100	99.296	ENSCPOG00000002571	POLR2D	100	99.296	Cavia_porcellus
ENSCLAG00000004449	POLR2D	100	99.296	ENSCCAG00000037709	POLR2D	100	99.296	Cebus_capucinus
ENSCLAG00000004449	POLR2D	100	98.592	ENSCATG00000036749	POLR2D	100	98.592	Cercocebus_atys
ENSCLAG00000004449	POLR2D	100	98.592	ENSCSAG00000016861	POLR2D	100	98.592	Chlorocebus_sabaeus
ENSCLAG00000004449	POLR2D	82	99.145	ENSCHOG00000013850	POLR2D	100	99.145	Choloepus_hoffmanni
ENSCLAG00000004449	POLR2D	100	95.070	ENSCPBG00000019132	POLR2D	51	95.070	Chrysemys_picta_bellii
ENSCLAG00000004449	POLR2D	90	85.938	ENSCING00000011474	-	96	85.938	Ciona_intestinalis
ENSCLAG00000004449	POLR2D	90	86.719	ENSCSAVG00000008353	-	88	86.719	Ciona_savignyi
ENSCLAG00000004449	POLR2D	100	99.296	ENSCANG00000043665	POLR2D	100	99.296	Colobus_angolensis_palliatus
ENSCLAG00000004449	POLR2D	100	99.296	ENSCGRG00001013608	Polr2d	100	99.296	Cricetulus_griseus_chok1gshd
ENSCLAG00000004449	POLR2D	82	99.145	ENSCGRG00000012624	Polr2d	100	99.145	Cricetulus_griseus_crigri
ENSCLAG00000004449	POLR2D	100	89.583	ENSCSEG00000006147	polr2d	100	89.583	Cynoglossus_semilaevis
ENSCLAG00000004449	POLR2D	100	90.278	ENSCVAG00000000779	polr2d	100	90.278	Cyprinodon_variegatus
ENSCLAG00000004449	POLR2D	100	91.549	ENSDARG00000076509	polr2d	100	91.549	Danio_rerio
ENSCLAG00000004449	POLR2D	100	97.183	ENSDNOG00000008527	POLR2D	100	97.183	Dasypus_novemcinctus
ENSCLAG00000004449	POLR2D	100	98.592	ENSDORG00000026897	Polr2d	100	98.592	Dipodomys_ordii
ENSCLAG00000004449	POLR2D	92	76.923	FBgn0263757	Rpb4	94	76.923	Drosophila_melanogaster
ENSCLAG00000004449	POLR2D	100	91.549	ENSEBUG00000007675	polr2d	100	91.549	Eptatretus_burgeri
ENSCLAG00000004449	POLR2D	100	98.592	ENSEASG00005007103	POLR2D	100	98.592	Equus_asinus_asinus
ENSCLAG00000004449	POLR2D	100	99.296	ENSECAG00000000556	POLR2D	100	99.296	Equus_caballus
ENSCLAG00000004449	POLR2D	99	90.780	ENSELUG00000005928	polr2d	99	90.780	Esox_lucius
ENSCLAG00000004449	POLR2D	100	99.296	ENSFCAG00000027816	POLR2D	100	99.296	Felis_catus
ENSCLAG00000004449	POLR2D	100	97.183	ENSFALG00000003528	POLR2D	100	97.183	Ficedula_albicollis
ENSCLAG00000004449	POLR2D	100	99.296	ENSFDAG00000007217	POLR2D	100	99.296	Fukomys_damarensis
ENSCLAG00000004449	POLR2D	100	93.007	ENSGMOG00000001823	polr2d	99	93.007	Gadus_morhua
ENSCLAG00000004449	POLR2D	100	96.479	ENSGALG00000002057	POLR2D	100	96.479	Gallus_gallus
ENSCLAG00000004449	POLR2D	100	90.972	ENSGAFG00000016932	polr2d	71	90.972	Gambusia_affinis
ENSCLAG00000004449	POLR2D	100	89.583	ENSGACG00000004639	polr2d	100	89.583	Gasterosteus_aculeatus
ENSCLAG00000004449	POLR2D	100	95.070	ENSGAGG00000021308	POLR2D	100	95.070	Gopherus_agassizii
ENSCLAG00000004449	POLR2D	100	99.296	ENSGGOG00000004723	POLR2D	100	99.296	Gorilla_gorilla
ENSCLAG00000004449	POLR2D	100	100.000	ENSHGLG00000016570	Polr2d	100	100.000	Heterocephalus_glaber_female
ENSCLAG00000004449	POLR2D	100	100.000	ENSHGLG00100013785	Polr2d	100	100.000	Heterocephalus_glaber_male
ENSCLAG00000004449	POLR2D	100	88.028	ENSHCOG00000006425	polr2d	100	88.028	Hippocampus_comes
ENSCLAG00000004449	POLR2D	100	90.845	ENSIPUG00000011192	polr2d	100	90.845	Ictalurus_punctatus
ENSCLAG00000004449	POLR2D	100	98.592	ENSSTOG00000023329	POLR2D	100	98.592	Ictidomys_tridecemlineatus
ENSCLAG00000004449	POLR2D	100	97.887	ENSJJAG00000015053	-	100	97.887	Jaculus_jaculus
ENSCLAG00000004449	POLR2D	100	88.732	ENSJJAG00000000783	-	100	88.732	Jaculus_jaculus
ENSCLAG00000004449	POLR2D	82	93.162	ENSJJAG00000005723	-	94	93.162	Jaculus_jaculus
ENSCLAG00000004449	POLR2D	85	90.083	ENSKMAG00000010677	polr2d	68	90.083	Kryptolebias_marmoratus
ENSCLAG00000004449	POLR2D	100	95.775	ENSLACG00000017253	POLR2D	100	95.775	Latimeria_chalumnae
ENSCLAG00000004449	POLR2D	100	90.972	ENSLOCG00000009106	polr2d	100	90.972	Lepisosteus_oculatus
ENSCLAG00000004449	POLR2D	100	98.592	ENSLAFG00000001848	POLR2D	100	98.592	Loxodonta_africana
ENSCLAG00000004449	POLR2D	100	98.592	ENSMFAG00000031937	POLR2D	100	98.592	Macaca_fascicularis
ENSCLAG00000004449	POLR2D	100	98.592	ENSMMUG00000001989	POLR2D	100	98.592	Macaca_mulatta
ENSCLAG00000004449	POLR2D	100	98.592	ENSMNEG00000035505	POLR2D	100	98.592	Macaca_nemestrina
ENSCLAG00000004449	POLR2D	100	98.592	ENSMLEG00000035827	POLR2D	100	98.592	Mandrillus_leucophaeus
ENSCLAG00000004449	POLR2D	100	96.479	ENSMGAG00000001248	POLR2D	100	96.479	Meleagris_gallopavo
ENSCLAG00000004449	POLR2D	100	98.592	ENSMAUG00000014518	Polr2d	100	98.592	Mesocricetus_auratus
ENSCLAG00000004449	POLR2D	100	98.592	ENSMICG00000009931	POLR2D	100	98.592	Microcebus_murinus
ENSCLAG00000004449	POLR2D	100	96.479	ENSMOCG00000019367	Polr2d	100	96.479	Microtus_ochrogaster
ENSCLAG00000004449	POLR2D	100	97.887	ENSMODG00000018653	-	100	97.887	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	81.690	ENSMODG00000025028	-	100	81.690	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	80.986	ENSMODG00000025029	-	100	80.986	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	81.690	ENSMODG00000025026	-	100	81.690	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	81.690	ENSMODG00000025027	-	100	81.690	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	80.986	ENSMODG00000025035	-	100	80.986	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	80.986	ENSMODG00000025036	-	100	80.986	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	80.986	ENSMODG00000025034	-	100	80.986	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	80.986	ENSMODG00000025033	-	100	80.986	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	80.282	ENSMODG00000025032	-	100	80.282	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	81.690	ENSMODG00000025030	-	100	81.690	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	80.986	ENSMODG00000025031	-	100	80.986	Monodelphis_domestica
ENSCLAG00000004449	POLR2D	100	90.278	ENSMALG00000018266	polr2d	100	90.278	Monopterus_albus
ENSCLAG00000004449	POLR2D	100	99.296	MGP_CAROLIEiJ_G0022066	Polr2d	100	99.296	Mus_caroli
ENSCLAG00000004449	POLR2D	100	99.296	ENSMUSG00000024258	Polr2d	100	99.296	Mus_musculus
ENSCLAG00000004449	POLR2D	100	99.296	MGP_PahariEiJ_G0018800	Polr2d	100	99.296	Mus_pahari
ENSCLAG00000004449	POLR2D	100	99.296	MGP_SPRETEiJ_G0022977	Polr2d	100	99.296	Mus_spretus
ENSCLAG00000004449	POLR2D	100	99.296	ENSMPUG00000016685	POLR2D	100	99.296	Mustela_putorius_furo
ENSCLAG00000004449	POLR2D	83	99.153	ENSMLUG00000006862	POLR2D	100	99.153	Myotis_lucifugus
ENSCLAG00000004449	POLR2D	100	99.296	ENSNGAG00000014862	Polr2d	100	99.296	Nannospalax_galili
ENSCLAG00000004449	POLR2D	100	99.296	ENSNLEG00000027191	POLR2D	100	99.296	Nomascus_leucogenys
ENSCLAG00000004449	POLR2D	82	98.291	ENSOPRG00000005327	POLR2D	100	98.291	Ochotona_princeps
ENSCLAG00000004449	POLR2D	100	100.000	ENSODEG00000005262	POLR2D	100	100.000	Octodon_degus
ENSCLAG00000004449	POLR2D	100	90.278	ENSONIG00000017290	polr2d	100	90.278	Oreochromis_niloticus
ENSCLAG00000004449	POLR2D	83	98.305	ENSOANG00000013216	POLR2D	100	98.305	Ornithorhynchus_anatinus
ENSCLAG00000004449	POLR2D	100	91.608	ENSOCUG00000021449	-	100	91.608	Oryctolagus_cuniculus
ENSCLAG00000004449	POLR2D	100	96.479	ENSOCUG00000023403	-	100	96.479	Oryctolagus_cuniculus
ENSCLAG00000004449	POLR2D	100	87.500	ENSORLG00000005266	polr2d	100	87.500	Oryzias_latipes
ENSCLAG00000004449	POLR2D	100	87.500	ENSORLG00020006647	polr2d	100	87.500	Oryzias_latipes_hni
ENSCLAG00000004449	POLR2D	100	87.500	ENSORLG00015003222	polr2d	100	87.500	Oryzias_latipes_hsok
ENSCLAG00000004449	POLR2D	100	88.194	ENSOMEG00000018915	polr2d	100	88.194	Oryzias_melastigma
ENSCLAG00000004449	POLR2D	100	97.222	ENSOGAG00000017118	POLR2D	100	97.222	Otolemur_garnettii
ENSCLAG00000004449	POLR2D	100	97.887	ENSOARG00000015995	POLR2D	100	97.887	Ovis_aries
ENSCLAG00000004449	POLR2D	100	99.296	ENSPPRG00000020222	POLR2D	100	99.296	Panthera_pardus
ENSCLAG00000004449	POLR2D	100	99.296	ENSPTIG00000018618	POLR2D	100	99.296	Panthera_tigris_altaica
ENSCLAG00000004449	POLR2D	100	99.296	ENSPTRG00000012436	POLR2D	100	99.296	Pan_troglodytes
ENSCLAG00000004449	POLR2D	100	98.592	ENSPANG00000018602	POLR2D	100	98.592	Papio_anubis
ENSCLAG00000004449	POLR2D	99	92.254	ENSPKIG00000012166	polr2d	99	92.254	Paramormyrops_kingsleyae
ENSCLAG00000004449	POLR2D	83	98.305	ENSPSIG00000002873	POLR2D	100	98.305	Pelodiscus_sinensis
ENSCLAG00000004449	POLR2D	100	99.296	ENSPEMG00000018244	Polr2d	100	99.296	Peromyscus_maniculatus_bairdii
ENSCLAG00000004449	POLR2D	100	87.324	ENSPMAG00000005021	polr2d	99	87.324	Petromyzon_marinus
ENSCLAG00000004449	POLR2D	100	90.972	ENSPFOG00000008969	polr2d	100	90.972	Poecilia_formosa
ENSCLAG00000004449	POLR2D	100	90.972	ENSPLAG00000017210	polr2d	100	90.972	Poecilia_latipinna
ENSCLAG00000004449	POLR2D	100	90.972	ENSPMEG00000005160	polr2d	100	90.972	Poecilia_mexicana
ENSCLAG00000004449	POLR2D	73	94.231	ENSPREG00000021862	polr2d	100	94.231	Poecilia_reticulata
ENSCLAG00000004449	POLR2D	100	99.296	ENSPPYG00000012759	POLR2D	100	99.296	Pongo_abelii
ENSCLAG00000004449	POLR2D	100	98.592	ENSPCAG00000001396	POLR2D	100	98.592	Procavia_capensis
ENSCLAG00000004449	POLR2D	100	98.592	ENSPCOG00000022076	POLR2D	100	98.592	Propithecus_coquereli
ENSCLAG00000004449	POLR2D	100	98.592	ENSPVAG00000004002	POLR2D	100	98.592	Pteropus_vampyrus
ENSCLAG00000004449	POLR2D	100	90.909	ENSPNAG00000018246	polr2d	100	90.909	Pygocentrus_nattereri
ENSCLAG00000004449	POLR2D	100	99.296	ENSRNOG00000016231	Polr2d	100	99.296	Rattus_norvegicus
ENSCLAG00000004449	POLR2D	100	99.296	ENSRBIG00000039326	POLR2D	100	99.296	Rhinopithecus_bieti
ENSCLAG00000004449	POLR2D	100	99.296	ENSRROG00000023289	POLR2D	100	99.296	Rhinopithecus_roxellana
ENSCLAG00000004449	POLR2D	100	97.183	ENSSHAG00000014817	-	100	97.183	Sarcophilus_harrisii
ENSCLAG00000004449	POLR2D	92	95.420	ENSSFOG00015024204	polr2d	100	90.972	Scleropages_formosus
ENSCLAG00000004449	POLR2D	100	90.278	ENSSDUG00000006060	polr2d	100	90.278	Seriola_dumerili
ENSCLAG00000004449	POLR2D	95	92.593	ENSSLDG00000024485	polr2d	100	89.655	Seriola_lalandi_dorsalis
ENSCLAG00000004449	POLR2D	82	98.291	ENSSARG00000009037	POLR2D	100	98.291	Sorex_araneus
ENSCLAG00000004449	POLR2D	100	96.479	ENSSPUG00000014915	POLR2D	100	96.479	Sphenodon_punctatus
ENSCLAG00000004449	POLR2D	100	90.278	ENSSPAG00000013386	polr2d	100	90.278	Stegastes_partitus
ENSCLAG00000004449	POLR2D	100	99.296	ENSSSCG00000039230	POLR2D	100	99.296	Sus_scrofa
ENSCLAG00000004449	POLR2D	100	96.479	ENSTGUG00000005773	POLR2D	99	96.479	Taeniopygia_guttata
ENSCLAG00000004449	POLR2D	100	90.141	ENSTRUG00000004740	polr2d	100	90.141	Takifugu_rubripes
ENSCLAG00000004449	POLR2D	99	91.489	ENSTNIG00000011210	polr2d	99	91.489	Tetraodon_nigroviridis
ENSCLAG00000004449	POLR2D	82	99.145	ENSTBEG00000006081	POLR2D	100	99.145	Tupaia_belangeri
ENSCLAG00000004449	POLR2D	82	99.145	ENSTTRG00000010055	POLR2D	100	99.145	Tursiops_truncatus
ENSCLAG00000004449	POLR2D	92	98.462	ENSUAMG00000024374	POLR2D	98	98.462	Ursus_americanus
ENSCLAG00000004449	POLR2D	98	88.489	ENSUMAG00000008280	POLR2D	100	99.038	Ursus_maritimus
ENSCLAG00000004449	POLR2D	82	99.145	ENSVPAG00000007239	POLR2D	100	99.145	Vicugna_pacos
ENSCLAG00000004449	POLR2D	100	99.296	ENSVVUG00000008616	POLR2D	100	99.296	Vulpes_vulpes
ENSCLAG00000004449	POLR2D	100	90.141	ENSXETG00000002955	polr2d	100	90.141	Xenopus_tropicalis
ENSCLAG00000004449	POLR2D	73	94.231	ENSXCOG00000012668	polr2d	100	94.231	Xiphophorus_couchianus
ENSCLAG00000004449	POLR2D	73	94.231	ENSXMAG00000014031	polr2d	100	94.231	Xiphophorus_maculatus