EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000004689 (Gene tree)
Gene ID: 102014753
Gene Symbol: PAPOLB
Alias: PAPT
Full Name: poly(A) polymerase beta
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 73501 bases
Position: chrJH721920.1:10872735-10946235
Accession: 102014753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000006647	PAP_RNA-bind	PF04926.15	2.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000006757	PAPOLB-201	4191	XM_013521248	ENSCLAP00000006647	627 (aa)	XP_013376702	-

Gene Model

Click here to download ENSCLAG00000004689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000004689	PAPOLB	100	81.960	ENSCLAG00000016342	PAPOLA	93	81.960
ENSCLAG00000004689	PAPOLB	79	72.233	ENSCLAG00000008603	PAPOLG	67	72.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004689	PAPOLB	95	84.245	ENSG00000218823	PAPOLB	98	82.343	Homo_sapiens
ENSCLAG00000004689	PAPOLB	97	79.672	ENSANAG00000033074	PAPOLB	98	79.672	Aotus_nancymaae
ENSCLAG00000004689	PAPOLB	98	84.800	ENSBTAG00000052734	PAPOLB	91	84.800	Bos_taurus
ENSCLAG00000004689	PAPOLB	79	92.944	ENSCPOG00000021527	PAPOLB	99	84.919	Cavia_porcellus
ENSCLAG00000004689	PAPOLB	98	82.194	ENSDNOG00000033378	PAPOLB	89	82.194	Dasypus_novemcinctus
ENSCLAG00000004689	PAPOLB	96	86.297	ENSDORG00000001140	Papolb	99	85.056	Dipodomys_ordii
ENSCLAG00000004689	PAPOLB	97	85.000	ENSEASG00005021531	PAPOLB	90	85.000	Equus_asinus_asinus
ENSCLAG00000004689	PAPOLB	94	85.059	ENSHGLG00000002987	-	98	85.059	Heterocephalus_glaber_female
ENSCLAG00000004689	PAPOLB	97	87.601	ENSJJAG00000012212	Papolb	92	85.959	Jaculus_jaculus
ENSCLAG00000004689	PAPOLB	86	87.085	ENSMFAG00000031074	PAPOLB	98	87.085	Macaca_fascicularis
ENSCLAG00000004689	PAPOLB	99	82.473	ENSMMUG00000043732	PAPOLB	90	82.473	Macaca_mulatta
ENSCLAG00000004689	PAPOLB	100	86.137	MGP_CAROLIEiJ_G0027962	Papolb	99	86.137	Mus_caroli
ENSCLAG00000004689	PAPOLB	100	86.137	ENSMUSG00000074817	Papolb	99	86.137	Mus_musculus
ENSCLAG00000004689	PAPOLB	100	85.514	MGP_PahariEiJ_G0024534	Papolb	99	85.514	Mus_pahari
ENSCLAG00000004689	PAPOLB	100	86.137	MGP_SPRETEiJ_G0028966	Papolb	99	86.137	Mus_spretus
ENSCLAG00000004689	PAPOLB	100	82.215	ENSMLUG00000029802	PAPOLB	97	82.215	Myotis_lucifugus
ENSCLAG00000004689	PAPOLB	100	96.651	ENSODEG00000009844	PAPOLB	95	96.651	Octodon_degus
ENSCLAG00000004689	PAPOLB	97	83.144	ENSOCUG00000022988	PAPOLB	99	84.821	Oryctolagus_cuniculus
ENSCLAG00000004689	PAPOLB	100	84.711	ENSOGAG00000031103	PAPOLB	91	84.711	Otolemur_garnettii
ENSCLAG00000004689	PAPOLB	95	83.914	ENSPTRG00000045383	PAPOLB	91	82.022	Pan_troglodytes
ENSCLAG00000004689	PAPOLB	98	85.144	ENSUMAG00000007631	PAPOLB	99	85.144	Ursus_maritimus