EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000004730 (Gene tree)
Gene ID: 102015243
Gene Symbol: SYNJ2
Alias: INPP5H
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 110538 bases
Position: chrJH721899.1:4290238-4400775
Accession: 102015243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000006713	Exo_endo_phos	PF03372.23	1.3e-13	1	1
ENSCLAP00000006714	Exo_endo_phos	PF03372.23	2.1e-13	1	1
ENSCLAP00000006716	Exo_endo_phos	PF03372.23	1.2e-08	1	1
ENSCLAP00000006715	Exo_endo_phos	PF03372.23	8.1e-06	1	1
ENSCLAP00000006715	DUF1866	PF08952.11	5.1e-61	1	1
ENSCLAP00000006713	DUF1866	PF08952.11	1.5e-60	1	1
ENSCLAP00000006714	DUF1866	PF08952.11	2.1e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000006824	SYNJ2-202	4474	XM_005390531	ENSCLAP00000006714	1490 (aa)	XP_005390588	UPI00038F1481
ENSCLAT00000006825	SYNJ2-203	2914	-	ENSCLAP00000006715	576 (aa)	-	-
ENSCLAT00000006826	SYNJ2-204	1563	-	ENSCLAP00000006716	520 (aa)	-	-
ENSCLAT00000006823	SYNJ2-201	3534	-	ENSCLAP00000006713	1177 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000004730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000004730	SYNJ2	90	59.792	ENSCLAG00000009796	SYNJ1	100	58.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004730	SYNJ2	100	86.454	ENSG00000078269	SYNJ2	99	93.333	Homo_sapiens
ENSCLAG00000004730	SYNJ2	90	91.489	ENSAMEG00000009581	SYNJ2	100	81.900	Ailuropoda_melanoleuca
ENSCLAG00000004730	SYNJ2	90	84.713	ENSAPLG00000002563	SYNJ2	99	69.755	Anas_platyrhynchos
ENSCLAG00000004730	SYNJ2	90	82.766	ENSACAG00000004945	SYNJ2	94	70.686	Anolis_carolinensis
ENSCLAG00000004730	SYNJ2	100	86.720	ENSANAG00000026575	SYNJ2	97	91.753	Aotus_nancymaae
ENSCLAG00000004730	SYNJ2	100	83.511	ENSBTAG00000000817	SYNJ2	100	83.445	Bos_taurus
ENSCLAG00000004730	SYNJ2	100	86.786	ENSCJAG00000003570	SYNJ2	97	92.074	Callithrix_jacchus
ENSCLAG00000004730	SYNJ2	90	92.340	ENSCAFG00000000644	SYNJ2	100	85.302	Canis_familiaris
ENSCLAG00000004730	SYNJ2	100	84.585	ENSCAFG00020015809	SYNJ2	100	84.784	Canis_lupus_dingo
ENSCLAG00000004730	SYNJ2	100	83.178	ENSCHIG00000011077	SYNJ2	100	83.245	Capra_hircus
ENSCLAG00000004730	SYNJ2	97	87.157	ENSTSYG00000014342	SYNJ2	94	92.123	Carlito_syrichta
ENSCLAG00000004730	SYNJ2	93	97.575	ENSCAPG00000000287	SYNJ2	100	97.409	Cavia_aperea
ENSCLAG00000004730	SYNJ2	100	94.106	ENSCPOG00000009144	SYNJ2	100	97.927	Cavia_porcellus
ENSCLAG00000004730	SYNJ2	100	86.388	ENSCCAG00000025484	SYNJ2	97	91.593	Cebus_capucinus
ENSCLAG00000004730	SYNJ2	100	86.321	ENSCATG00000042943	SYNJ2	97	91.680	Cercocebus_atys
ENSCLAG00000004730	SYNJ2	100	86.587	ENSCSAG00000013130	SYNJ2	100	87.533	Chlorocebus_sabaeus
ENSCLAG00000004730	SYNJ2	57	94.444	ENSCHOG00000000343	-	52	96.396	Choloepus_hoffmanni
ENSCLAG00000004730	SYNJ2	90	85.138	ENSCPBG00000016273	SYNJ2	98	72.053	Chrysemys_picta_bellii
ENSCLAG00000004730	SYNJ2	98	87.081	ENSCANG00000040349	SYNJ2	97	91.591	Colobus_angolensis_palliatus
ENSCLAG00000004730	SYNJ2	100	86.701	ENSCGRG00001004257	Synj2	100	87.323	Cricetulus_griseus_chok1gshd
ENSCLAG00000004730	SYNJ2	100	86.701	ENSCGRG00000001656	Synj2	100	90.933	Cricetulus_griseus_crigri
ENSCLAG00000004730	SYNJ2	100	78.095	ENSDNOG00000015900	SYNJ2	96	83.576	Dasypus_novemcinctus
ENSCLAG00000004730	SYNJ2	91	92.781	ENSDORG00000014128	Synj2	99	84.257	Dipodomys_ordii
ENSCLAG00000004730	SYNJ2	80	91.667	ENSETEG00000017418	SYNJ2	82	91.667	Echinops_telfairi
ENSCLAG00000004730	SYNJ2	100	86.653	ENSEASG00005018902	SYNJ2	100	86.854	Equus_asinus_asinus
ENSCLAG00000004730	SYNJ2	100	86.519	ENSECAG00000012646	SYNJ2	94	86.720	Equus_caballus
ENSCLAG00000004730	SYNJ2	59	76.786	ENSEEUG00000015796	-	58	76.786	Erinaceus_europaeus
ENSCLAG00000004730	SYNJ2	100	85.044	ENSFCAG00000010854	SYNJ2	97	90.330	Felis_catus
ENSCLAG00000004730	SYNJ2	90	81.741	ENSFALG00000012593	SYNJ2	98	68.585	Ficedula_albicollis
ENSCLAG00000004730	SYNJ2	98	93.118	ENSFDAG00000016352	SYNJ2	100	96.373	Fukomys_damarensis
ENSCLAG00000004730	SYNJ2	90	83.652	ENSGALG00000013727	SYNJ2	90	75.240	Gallus_gallus
ENSCLAG00000004730	SYNJ2	90	84.713	ENSGAGG00000009857	SYNJ2	98	71.571	Gopherus_agassizii
ENSCLAG00000004730	SYNJ2	100	86.587	ENSGGOG00000012210	SYNJ2	97	91.840	Gorilla_gorilla
ENSCLAG00000004730	SYNJ2	100	97.917	ENSHGLG00000007534	SYNJ2	100	97.917	Heterocephalus_glaber_female
ENSCLAG00000004730	SYNJ2	99	94.278	ENSHGLG00100009973	SYNJ2	100	97.409	Heterocephalus_glaber_male
ENSCLAG00000004730	SYNJ2	91	95.754	ENSSTOG00000016474	SYNJ2	99	89.815	Ictidomys_tridecemlineatus
ENSCLAG00000004730	SYNJ2	95	91.710	ENSJJAG00000014436	Synj2	96	90.363	Jaculus_jaculus
ENSCLAG00000004730	SYNJ2	90	74.419	ENSLACG00000007316	SYNJ2	99	69.108	Latimeria_chalumnae
ENSCLAG00000004730	SYNJ2	93	88.641	ENSLAFG00000011979	SYNJ2	100	82.970	Loxodonta_africana
ENSCLAG00000004730	SYNJ2	93	91.389	ENSMFAG00000040552	SYNJ2	100	91.389	Macaca_fascicularis
ENSCLAG00000004730	SYNJ2	90	92.979	ENSMMUG00000007153	SYNJ2	96	91.881	Macaca_mulatta
ENSCLAG00000004730	SYNJ2	100	86.454	ENSMNEG00000017211	SYNJ2	97	91.600	Macaca_nemestrina
ENSCLAG00000004730	SYNJ2	100	83.333	ENSMLEG00000024911	SYNJ2	100	84.267	Mandrillus_leucophaeus
ENSCLAG00000004730	SYNJ2	90	81.186	ENSMGAG00000012839	SYNJ2	98	74.141	Meleagris_gallopavo
ENSCLAG00000004730	SYNJ2	99	86.792	ENSMAUG00000022212	Synj2	100	90.933	Mesocricetus_auratus
ENSCLAG00000004730	SYNJ2	100	85.400	ENSMICG00000015804	SYNJ2	97	88.951	Microcebus_murinus
ENSCLAG00000004730	SYNJ2	99	86.658	ENSMOCG00000020054	Synj2	100	91.969	Microtus_ochrogaster
ENSCLAG00000004730	SYNJ2	90	91.277	ENSMODG00000007783	SYNJ2	100	79.894	Monodelphis_domestica
ENSCLAG00000004730	SYNJ2	99	85.666	MGP_CAROLIEiJ_G0021026	Synj2	100	93.788	Mus_caroli
ENSCLAG00000004730	SYNJ2	91	93.869	ENSMUSG00000023805	Synj2	100	93.788	Mus_musculus
ENSCLAG00000004730	SYNJ2	96	89.189	MGP_PahariEiJ_G0023344	Synj2	100	93.636	Mus_pahari
ENSCLAG00000004730	SYNJ2	99	85.330	MGP_SPRETEiJ_G0021931	Synj2	100	93.182	Mus_spretus
ENSCLAG00000004730	SYNJ2	95	83.749	ENSMPUG00000005323	SYNJ2	98	86.687	Mustela_putorius_furo
ENSCLAG00000004730	SYNJ2	90	90.426	ENSMLUG00000000324	SYNJ2	100	83.380	Myotis_lucifugus
ENSCLAG00000004730	SYNJ2	99	88.539	ENSNGAG00000014859	Synj2	100	91.192	Nannospalax_galili
ENSCLAG00000004730	SYNJ2	100	83.245	ENSNLEG00000010750	SYNJ2	97	87.780	Nomascus_leucogenys
ENSCLAG00000004730	SYNJ2	92	83.251	ENSMEUG00000003493	SYNJ2	95	83.251	Notamacropus_eugenii
ENSCLAG00000004730	SYNJ2	90	87.447	ENSOPRG00000009648	SYNJ2	93	80.819	Ochotona_princeps
ENSCLAG00000004730	SYNJ2	100	94.930	ENSODEG00000007709	SYNJ2	100	96.114	Octodon_degus
ENSCLAG00000004730	SYNJ2	61	65.594	ENSOANG00000029828	-	99	61.353	Ornithorhynchus_anatinus
ENSCLAG00000004730	SYNJ2	97	83.685	ENSOCUG00000004762	SYNJ2	100	84.589	Oryctolagus_cuniculus
ENSCLAG00000004730	SYNJ2	90	91.915	ENSOGAG00000000488	SYNJ2	100	89.801	Otolemur_garnettii
ENSCLAG00000004730	SYNJ2	95	84.932	ENSOARG00000004304	SYNJ2	100	82.385	Ovis_aries
ENSCLAG00000004730	SYNJ2	99	86.445	ENSPPAG00000028831	SYNJ2	99	87.258	Pan_paniscus
ENSCLAG00000004730	SYNJ2	100	85.111	ENSPPRG00000009068	SYNJ2	97	90.250	Panthera_pardus
ENSCLAG00000004730	SYNJ2	100	82.476	ENSPTIG00000018780	SYNJ2	94	90.067	Panthera_tigris_altaica
ENSCLAG00000004730	SYNJ2	100	86.720	ENSPTRG00000018739	SYNJ2	100	91.767	Pan_troglodytes
ENSCLAG00000004730	SYNJ2	100	86.454	ENSPANG00000010755	SYNJ2	97	91.760	Papio_anubis
ENSCLAG00000004730	SYNJ2	90	84.926	ENSPSIG00000014659	SYNJ2	98	70.925	Pelodiscus_sinensis
ENSCLAG00000004730	SYNJ2	100	87.218	ENSPEMG00000006247	Synj2	100	91.969	Peromyscus_maniculatus_bairdii
ENSCLAG00000004730	SYNJ2	90	90.851	ENSPCIG00000010179	SYNJ2	100	80.465	Phascolarctos_cinereus
ENSCLAG00000004730	SYNJ2	100	86.122	ENSPPYG00000017130	SYNJ2	100	87.067	Pongo_abelii
ENSCLAG00000004730	SYNJ2	79	96.000	ENSPCAG00000009217	SYNJ2	90	75.828	Procavia_capensis
ENSCLAG00000004730	SYNJ2	100	87.133	ENSPCOG00000026910	SYNJ2	97	91.513	Propithecus_coquereli
ENSCLAG00000004730	SYNJ2	100	82.195	ENSPVAG00000006131	SYNJ2	100	81.635	Pteropus_vampyrus
ENSCLAG00000004730	SYNJ2	100	91.319	ENSRNOG00000017114	Synj2	100	85.146	Rattus_norvegicus
ENSCLAG00000004730	SYNJ2	99	85.647	ENSRBIG00000044126	SYNJ2	100	85.580	Rhinopithecus_bieti
ENSCLAG00000004730	SYNJ2	100	87.133	ENSRROG00000027755	SYNJ2	97	91.520	Rhinopithecus_roxellana
ENSCLAG00000004730	SYNJ2	100	86.189	ENSSBOG00000034876	SYNJ2	97	91.513	Saimiri_boliviensis_boliviensis
ENSCLAG00000004730	SYNJ2	90	90.851	ENSSHAG00000018881	SYNJ2	100	80.027	Sarcophilus_harrisii
ENSCLAG00000004730	SYNJ2	90	84.894	ENSSPUG00000000491	SYNJ2	95	73.111	Sphenodon_punctatus
ENSCLAG00000004730	SYNJ2	100	82.797	ENSSSCG00000012315	SYNJ2	97	90.733	Sus_scrofa
ENSCLAG00000004730	SYNJ2	90	79.877	ENSTGUG00000011082	SYNJ2	100	73.438	Taeniopygia_guttata
ENSCLAG00000004730	SYNJ2	93	72.297	ENSTBEG00000015827	SYNJ2	85	82.282	Tupaia_belangeri
ENSCLAG00000004730	SYNJ2	100	80.228	ENSTTRG00000009677	SYNJ2	100	80.496	Tursiops_truncatus
ENSCLAG00000004730	SYNJ2	91	85.593	ENSUAMG00000026577	-	88	85.593	Ursus_americanus
ENSCLAG00000004730	SYNJ2	85	81.273	ENSUAMG00000021958	-	98	77.764	Ursus_americanus
ENSCLAG00000004730	SYNJ2	93	89.219	ENSUMAG00000012826	SYNJ2	96	83.283	Ursus_maritimus
ENSCLAG00000004730	SYNJ2	90	87.475	ENSVVUG00000007407	SYNJ2	100	89.250	Vulpes_vulpes
ENSCLAG00000004730	SYNJ2	90	75.847	ENSXETG00000034066	synj2	88	65.541	Xenopus_tropicalis