EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000004791 (Gene tree)
Gene ID: 102010161
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 6715 bases
Position: chrJH721878.1:2551533-2558247
Accession: 102010161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000006795	SRP19	PF01922.17	3.4e-29	1	1
ENSCLAP00000006796	SRP19	PF01922.17	8.7e-15	1	2
ENSCLAP00000006796	SRP19	PF01922.17	8.7e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000006908	-	363	-	ENSCLAP00000006796	120 (aa)	-	UPI00038EB344
ENSCLAT00000006907	-	920	XM_005382144	ENSCLAP00000006795	144 (aa)	XP_005382201	UPI00038EAF47

Gene Model

Click here to download ENSCLAG00000004791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000004791	-	100	94.444	ENSCLAG00000016055	-	100	94.444
ENSCLAG00000004791	-	100	100.000	ENSCLAG00000008943	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004791	-	93	95.495	ENSG00000153037	SRP19	100	95.050	Homo_sapiens
ENSCLAG00000004791	-	90	68.992	ENSAPOG00000002199	srp19	88	70.635	Acanthochromis_polyacanthus
ENSCLAG00000004791	-	94	93.333	ENSAMEG00000012623	SRP19	92	93.333	Ailuropoda_melanoleuca
ENSCLAG00000004791	-	89	67.969	ENSACIG00000005082	srp19	89	67.969	Amphilophus_citrinellus
ENSCLAG00000004791	-	90	68.217	ENSAOCG00000002718	srp19	89	69.841	Amphiprion_ocellaris
ENSCLAG00000004791	-	90	68.217	ENSAPEG00000022170	srp19	89	69.841	Amphiprion_percula
ENSCLAG00000004791	-	90	70.543	ENSATEG00000012472	srp19	91	70.543	Anabas_testudineus
ENSCLAG00000004791	-	78	83.186	ENSAPLG00000002624	SRP19	92	83.333	Anas_platyrhynchos
ENSCLAG00000004791	-	92	77.444	ENSACAG00000007550	SRP19	92	77.612	Anolis_carolinensis
ENSCLAG00000004791	-	78	82.301	ENSANAG00000029862	-	89	85.567	Aotus_nancymaae
ENSCLAG00000004791	-	95	72.993	ENSANAG00000030287	-	97	73.485	Aotus_nancymaae
ENSCLAG00000004791	-	100	97.500	ENSANAG00000032576	-	100	97.500	Aotus_nancymaae
ENSCLAG00000004791	-	89	65.625	ENSACLG00000006259	srp19	90	65.625	Astatotilapia_calliptera
ENSCLAG00000004791	-	88	69.291	ENSAMXG00000043011	srp19	90	69.531	Astyanax_mexicanus
ENSCLAG00000004791	-	94	94.074	ENSBTAG00000012803	SRP19	94	94.074	Bos_taurus
ENSCLAG00000004791	-	82	49.153	WBGene00018159	F37F2.2	82	49.153	Caenorhabditis_elegans
ENSCLAG00000004791	-	91	72.519	ENSCJAG00000045531	-	85	72.180	Callithrix_jacchus
ENSCLAG00000004791	-	100	96.667	ENSCJAG00000038676	-	100	96.667	Callithrix_jacchus
ENSCLAG00000004791	-	94	94.074	ENSCAFG00000031549	SRP19	94	94.074	Canis_familiaris
ENSCLAG00000004791	-	93	95.495	ENSCAFG00020014267	-	93	95.495	Canis_lupus_dingo
ENSCLAG00000004791	-	83	95.000	ENSCAFG00020022437	-	93	95.161	Canis_lupus_dingo
ENSCLAG00000004791	-	64	89.130	ENSCAFG00020004285	-	86	89.583	Canis_lupus_dingo
ENSCLAG00000004791	-	94	94.074	ENSCHIG00000017551	SRP19	94	94.074	Capra_hircus
ENSCLAG00000004791	-	100	96.667	ENSTSYG00000007875	SRP19	100	96.667	Carlito_syrichta
ENSCLAG00000004791	-	77	90.090	ENSCPOG00000036806	SRP19	83	90.090	Cavia_porcellus
ENSCLAG00000004791	-	92	74.436	ENSCCAG00000023426	-	87	74.436	Cebus_capucinus
ENSCLAG00000004791	-	92	71.970	ENSCCAG00000029821	-	66	71.970	Cebus_capucinus
ENSCLAG00000004791	-	100	97.500	ENSCCAG00000035651	-	100	97.500	Cebus_capucinus
ENSCLAG00000004791	-	88	79.528	ENSCATG00000040513	-	80	79.231	Cercocebus_atys
ENSCLAG00000004791	-	94	85.926	ENSCATG00000039250	-	93	85.926	Cercocebus_atys
ENSCLAG00000004791	-	94	94.815	ENSCHOG00000013452	SRP19	94	94.815	Choloepus_hoffmanni
ENSCLAG00000004791	-	90	79.845	ENSCPBG00000013903	SRP19	91	80.000	Chrysemys_picta_bellii
ENSCLAG00000004791	-	94	93.333	ENSCGRG00001020510	Srp19	94	93.333	Cricetulus_griseus_chok1gshd
ENSCLAG00000004791	-	67	87.129	ENSCGRG00000010716	-	89	87.129	Cricetulus_griseus_crigri
ENSCLAG00000004791	-	83	84.167	ENSCGRG00000008542	-	92	84.167	Cricetulus_griseus_crigri
ENSCLAG00000004791	-	89	68.750	ENSCSEG00000010039	srp19	90	68.750	Cynoglossus_semilaevis
ENSCLAG00000004791	-	88	71.429	ENSCVAG00000017621	srp19	89	70.866	Cyprinodon_variegatus
ENSCLAG00000004791	-	87	70.400	ENSDARG00000035699	srp19	89	70.635	Danio_rerio
ENSCLAG00000004791	-	94	94.074	ENSDNOG00000013856	SRP19	94	94.074	Dasypus_novemcinctus
ENSCLAG00000004791	-	68	96.341	ENSDORG00000004746	Srp19	76	93.814	Dipodomys_ordii
ENSCLAG00000004791	-	80	50.435	FBgn0015298	Srp19	70	51.327	Drosophila_melanogaster
ENSCLAG00000004791	-	94	88.889	ENSETEG00000017132	SRP19	94	88.889	Echinops_telfairi
ENSCLAG00000004791	-	81	64.655	ENSEBUG00000006613	srp19	87	62.903	Eptatretus_burgeri
ENSCLAG00000004791	-	94	92.593	ENSEASG00005015182	SRP19	94	92.593	Equus_asinus_asinus
ENSCLAG00000004791	-	94	94.074	ENSEEUG00000007298	SRP19	94	94.074	Erinaceus_europaeus
ENSCLAG00000004791	-	89	70.312	ENSELUG00000007958	srp19	91	70.543	Esox_lucius
ENSCLAG00000004791	-	90	67.442	ENSELUG00000004594	srp19	89	69.048	Esox_lucius
ENSCLAG00000004791	-	100	96.667	ENSFCAG00000025895	SRP19	100	96.667	Felis_catus
ENSCLAG00000004791	-	100	97.500	ENSFDAG00000013543	SRP19	100	97.500	Fukomys_damarensis
ENSCLAG00000004791	-	78	70.536	ENSFHEG00000000493	srp19	89	70.079	Fundulus_heteroclitus
ENSCLAG00000004791	-	83	70.833	ENSGMOG00000003264	srp19	93	70.833	Gadus_morhua
ENSCLAG00000004791	-	92	81.955	ENSGALG00000000218	SRP19	93	82.090	Gallus_gallus
ENSCLAG00000004791	-	84	71.901	ENSGAFG00000015815	srp19	60	69.600	Gambusia_affinis
ENSCLAG00000004791	-	88	70.635	ENSGACG00000001093	srp19	85	70.079	Gasterosteus_aculeatus
ENSCLAG00000004791	-	92	80.451	ENSGAGG00000025305	SRP19	93	80.597	Gopherus_agassizii
ENSCLAG00000004791	-	90	65.385	ENSHBUG00000006131	srp19	90	65.385	Haplochromis_burtoni
ENSCLAG00000004791	-	100	98.333	ENSHGLG00000006075	SRP19	100	98.333	Heterocephalus_glaber_female
ENSCLAG00000004791	-	100	98.333	ENSHGLG00100015859	SRP19	100	98.333	Heterocephalus_glaber_male
ENSCLAG00000004791	-	89	66.406	ENSHCOG00000013231	srp19	90	66.406	Hippocampus_comes
ENSCLAG00000004791	-	90	67.568	ENSIPUG00000025084	srp19	92	67.857	Ictalurus_punctatus
ENSCLAG00000004791	-	93	95.495	ENSSTOG00000000348	SRP19	93	95.495	Ictidomys_tridecemlineatus
ENSCLAG00000004791	-	93	94.595	ENSJJAG00000017185	Srp19	93	94.595	Jaculus_jaculus
ENSCLAG00000004791	-	91	69.466	ENSKMAG00000011155	srp19	92	69.466	Kryptolebias_marmoratus
ENSCLAG00000004791	-	88	70.635	ENSLBEG00000026727	srp19	89	70.635	Labrus_bergylta
ENSCLAG00000004791	-	88	78.571	ENSLACG00000004459	SRP19	82	78.740	Latimeria_chalumnae
ENSCLAG00000004791	-	87	76.800	ENSLOCG00000010302	srp19	89	76.984	Lepisosteus_oculatus
ENSCLAG00000004791	-	94	94.074	ENSLAFG00000002564	SRP19	94	94.074	Loxodonta_africana
ENSCLAG00000004791	-	83	71.429	ENSMFAG00000040055	-	90	71.901	Macaca_fascicularis
ENSCLAG00000004791	-	94	84.444	ENSMFAG00000000554	-	93	84.444	Macaca_fascicularis
ENSCLAG00000004791	-	94	84.444	ENSMMUG00000049186	-	93	84.444	Macaca_mulatta
ENSCLAG00000004791	-	85	79.675	ENSMMUG00000032515	-	92	80.000	Macaca_mulatta
ENSCLAG00000004791	-	93	94.595	ENSMNEG00000038714	SRP19	93	94.595	Macaca_nemestrina
ENSCLAG00000004791	-	83	70.588	ENSMNEG00000040117	-	90	71.074	Macaca_nemestrina
ENSCLAG00000004791	-	89	70.312	ENSMAMG00000018346	srp19	89	70.312	Mastacembelus_armatus
ENSCLAG00000004791	-	90	65.385	ENSMZEG00005001765	srp19	90	65.625	Maylandia_zebra
ENSCLAG00000004791	-	83	83.333	ENSMGAG00000006762	SRP19	92	83.471	Meleagris_gallopavo
ENSCLAG00000004791	-	67	83.505	ENSMICG00000049202	-	91	84.158	Microcebus_murinus
ENSCLAG00000004791	-	93	93.694	ENSMICG00000000399	SRP19	93	93.694	Microcebus_murinus
ENSCLAG00000004791	-	94	94.074	ENSMOCG00000006534	Srp19	94	94.074	Microtus_ochrogaster
ENSCLAG00000004791	-	67	92.784	ENSMOCG00000010532	-	89	92.784	Microtus_ochrogaster
ENSCLAG00000004791	-	92	68.939	ENSMMOG00000010417	srp19	86	68.421	Mola_mola
ENSCLAG00000004791	-	90	89.922	ENSMODG00000013278	SRP19	91	90.000	Monodelphis_domestica
ENSCLAG00000004791	-	88	73.016	ENSMALG00000003858	srp19	89	73.016	Monopterus_albus
ENSCLAG00000004791	-	94	93.333	MGP_CAROLIEiJ_G0022086	Srp19	98	97.436	Mus_caroli
ENSCLAG00000004791	-	94	93.333	ENSMUSG00000014504	Srp19	98	97.436	Mus_musculus
ENSCLAG00000004791	-	94	93.333	MGP_PahariEiJ_G0018820	Srp19	98	94.872	Mus_pahari
ENSCLAG00000004791	-	94	93.333	MGP_SPRETEiJ_G0022998	Srp19	98	97.436	Mus_spretus
ENSCLAG00000004791	-	94	94.074	ENSMPUG00000012695	SRP19	92	94.074	Mustela_putorius_furo
ENSCLAG00000004791	-	94	94.074	ENSMLUG00000014793	-	94	94.074	Myotis_lucifugus
ENSCLAG00000004791	-	86	89.516	ENSMLUG00000024549	-	90	89.600	Myotis_lucifugus
ENSCLAG00000004791	-	90	84.615	ENSNGAG00000014524	-	100	84.615	Nannospalax_galili
ENSCLAG00000004791	-	94	94.074	ENSNGAG00000003440	-	94	94.074	Nannospalax_galili
ENSCLAG00000004791	-	94	80.741	ENSNLEG00000035364	-	94	80.741	Nomascus_leucogenys
ENSCLAG00000004791	-	83	93.277	ENSMEUG00000012529	SRP19	92	93.333	Notamacropus_eugenii
ENSCLAG00000004791	-	81	93.162	ENSOPRG00000010549	SRP19	92	92.500	Ochotona_princeps
ENSCLAG00000004791	-	91	80.153	ENSODEG00000013862	-	94	80.741	Octodon_degus
ENSCLAG00000004791	-	74	97.170	ENSODEG00000005538	-	93	97.170	Octodon_degus
ENSCLAG00000004791	-	91	93.130	ENSODEG00000019119	-	94	92.593	Octodon_degus
ENSCLAG00000004791	-	89	65.625	ENSONIG00000000542	srp19	90	65.625	Oreochromis_niloticus
ENSCLAG00000004791	-	88	83.333	ENSOANG00000011139	SRP19	73	83.465	Ornithorhynchus_anatinus
ENSCLAG00000004791	-	94	90.441	ENSOCUG00000015639	SRP19	94	90.441	Oryctolagus_cuniculus
ENSCLAG00000004791	-	90	70.543	ENSORLG00000028267	srp19	91	70.543	Oryzias_latipes
ENSCLAG00000004791	-	90	70.543	ENSORLG00020015201	srp19	91	70.543	Oryzias_latipes_hni
ENSCLAG00000004791	-	90	70.543	ENSORLG00015007525	srp19	91	70.543	Oryzias_latipes_hsok
ENSCLAG00000004791	-	90	69.767	ENSOMEG00000009178	srp19	91	69.767	Oryzias_melastigma
ENSCLAG00000004791	-	94	94.815	ENSOGAG00000008579	SRP19	94	94.815	Otolemur_garnettii
ENSCLAG00000004791	-	94	93.333	ENSOARG00000016066	SRP19	94	93.333	Ovis_aries
ENSCLAG00000004791	-	93	95.495	ENSPPAG00000037062	SRP19	93	95.495	Pan_paniscus
ENSCLAG00000004791	-	100	96.667	ENSPPRG00000015591	SRP19	100	96.667	Panthera_pardus
ENSCLAG00000004791	-	100	96.667	ENSPTIG00000021474	SRP19	100	96.667	Panthera_tigris_altaica
ENSCLAG00000004791	-	93	95.495	ENSPTRG00000017136	SRP19	93	95.495	Pan_troglodytes
ENSCLAG00000004791	-	94	85.185	ENSPANG00000034740	-	93	85.185	Papio_anubis
ENSCLAG00000004791	-	93	94.595	ENSPANG00000004370	-	93	94.595	Papio_anubis
ENSCLAG00000004791	-	90	69.767	ENSPKIG00000018671	srp19	89	71.429	Paramormyrops_kingsleyae
ENSCLAG00000004791	-	83	83.333	ENSPSIG00000013811	SRP19	92	83.471	Pelodiscus_sinensis
ENSCLAG00000004791	-	90	68.992	ENSPMGG00000015313	srp19	89	70.635	Periophthalmus_magnuspinnatus
ENSCLAG00000004791	-	94	90.370	ENSPEMG00000004412	-	93	90.370	Peromyscus_maniculatus_bairdii
ENSCLAG00000004791	-	90	64.615	ENSPMAG00000002685	srp19	91	65.116	Petromyzon_marinus
ENSCLAG00000004791	-	90	91.473	ENSPCIG00000010250	SRP19	90	91.538	Phascolarctos_cinereus
ENSCLAG00000004791	-	88	70.635	ENSPFOG00000015887	srp19	89	70.635	Poecilia_formosa
ENSCLAG00000004791	-	88	70.635	ENSPLAG00000007784	srp19	89	70.635	Poecilia_latipinna
ENSCLAG00000004791	-	88	69.841	ENSPMEG00000003056	srp19	89	69.841	Poecilia_mexicana
ENSCLAG00000004791	-	88	70.635	ENSPREG00000017307	srp19	88	70.635	Poecilia_reticulata
ENSCLAG00000004791	-	94	94.074	ENSPPYG00000029584	SRP19	92	94.074	Pongo_abelii
ENSCLAG00000004791	-	94	74.815	ENSPCAG00000000228	SRP19	94	74.815	Procavia_capensis
ENSCLAG00000004791	-	93	95.495	ENSPCOG00000023239	SRP19	93	95.495	Propithecus_coquereli
ENSCLAG00000004791	-	94	94.074	ENSPVAG00000004895	SRP19	94	94.074	Pteropus_vampyrus
ENSCLAG00000004791	-	87	67.200	ENSPNAG00000009392	srp19	89	67.460	Pygocentrus_nattereri
ENSCLAG00000004791	-	94	93.333	ENSRNOG00000020204	Srp19	94	93.333	Rattus_norvegicus
ENSCLAG00000004791	-	52	88.000	ENSRBIG00000031651	-	83	88.000	Rhinopithecus_bieti
ENSCLAG00000004791	-	93	94.595	ENSRBIG00000015627	-	93	94.595	Rhinopithecus_bieti
ENSCLAG00000004791	-	91	85.321	ENSRBIG00000040440	-	93	84.328	Rhinopithecus_bieti
ENSCLAG00000004791	-	86	75.000	ENSRROG00000037316	-	92	75.610	Rhinopithecus_roxellana
ENSCLAG00000004791	-	91	85.321	ENSRROG00000037054	-	92	85.455	Rhinopithecus_roxellana
ENSCLAG00000004791	-	100	97.500	ENSSBOG00000028071	-	100	97.500	Saimiri_boliviensis_boliviensis
ENSCLAG00000004791	-	94	68.889	ENSSBOG00000032685	-	89	75.758	Saimiri_boliviensis_boliviensis
ENSCLAG00000004791	-	90	72.093	ENSSFOG00015022139	srp19	91	72.093	Scleropages_formosus
ENSCLAG00000004791	-	89	66.406	ENSSMAG00000016803	srp19	89	66.406	Scophthalmus_maximus
ENSCLAG00000004791	-	90	62.143	ENSSDUG00000012930	srp19	90	62.590	Seriola_dumerili
ENSCLAG00000004791	-	61	54.545	ENSSLDG00000021916	-	57	54.545	Seriola_lalandi_dorsalis
ENSCLAG00000004791	-	94	91.852	ENSSARG00000000615	SRP19	94	91.852	Sorex_araneus
ENSCLAG00000004791	-	85	84.553	ENSSPUG00000015769	SRP19	90	83.969	Sphenodon_punctatus
ENSCLAG00000004791	-	94	94.074	ENSSSCG00000026230	SRP19	94	94.074	Sus_scrofa
ENSCLAG00000004791	-	85	82.927	ENSTGUG00000001019	SRP19	91	81.203	Taeniopygia_guttata
ENSCLAG00000004791	-	88	73.643	ENSTRUG00000023119	srp19	90	73.077	Takifugu_rubripes
ENSCLAG00000004791	-	90	69.767	ENSTNIG00000018880	srp19	90	70.312	Tetraodon_nigroviridis
ENSCLAG00000004791	-	94	92.593	ENSTTRG00000001690	SRP19	94	92.593	Tursiops_truncatus
ENSCLAG00000004791	-	91	93.893	ENSUAMG00000000111	SRP19	94	94.074	Ursus_americanus
ENSCLAG00000004791	-	94	94.074	ENSUMAG00000016997	SRP19	94	94.074	Ursus_maritimus
ENSCLAG00000004791	-	94	93.333	ENSVPAG00000006001	SRP19	94	93.333	Vicugna_pacos
ENSCLAG00000004791	-	65	96.154	ENSVVUG00000012423	SRP19	100	96.154	Vulpes_vulpes
ENSCLAG00000004791	-	84	71.901	ENSXETG00000011993	srp19	85	71.901	Xenopus_tropicalis
ENSCLAG00000004791	-	65	69.149	ENSXCOG00000012530	srp19	67	69.149	Xiphophorus_couchianus
ENSCLAG00000004791	-	92	68.182	ENSXMAG00000029788	srp19	89	71.429	Xiphophorus_maculatus