EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000004910 (Gene tree)
Gene ID: 102021599
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 51297 bases
Position: chrJH721899.1:7282264-7333560
Accession: 102021599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000006975	RRM_1	PF00076.22	1.6e-09	1	1
ENSCLAP00000006976	RRM_1	PF00076.22	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007088	SCAF8-202	3855	-	ENSCLAP00000006976	1284 (aa)	-	-
ENSCLAT00000007087	SCAF8-201	4436	XM_013517331	ENSCLAP00000006975	1259 (aa)	XP_013372785	-

Gene Model

Click here to download ENSCLAG00000004910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004910	SCAF8	100	95.563	ENSG00000213079	SCAF8	100	95.047	Homo_sapiens
ENSCLAG00000004910	SCAF8	87	68.165	ENSAPOG00000015527	SCAF8	77	67.347	Acanthochromis_polyacanthus
ENSCLAG00000004910	SCAF8	100	94.370	ENSAMEG00000007583	SCAF8	95	94.370	Ailuropoda_melanoleuca
ENSCLAG00000004910	SCAF8	87	68.165	ENSAOCG00000002421	SCAF8	76	67.801	Amphiprion_ocellaris
ENSCLAG00000004910	SCAF8	88	64.964	ENSATEG00000006959	SCAF8	97	63.899	Anabas_testudineus
ENSCLAG00000004910	SCAF8	100	79.042	ENSAPLG00000005765	SCAF8	99	79.042	Anas_platyrhynchos
ENSCLAG00000004910	SCAF8	100	74.077	ENSACAG00000005282	SCAF8	99	73.998	Anolis_carolinensis
ENSCLAG00000004910	SCAF8	100	95.008	ENSANAG00000036184	SCAF8	100	94.497	Aotus_nancymaae
ENSCLAG00000004910	SCAF8	86	68.804	ENSACLG00000018828	SCAF8	80	67.927	Astatotilapia_calliptera
ENSCLAG00000004910	SCAF8	100	93.810	ENSBTAG00000031917	SCAF8	100	93.307	Bos_taurus
ENSCLAG00000004910	SCAF8	100	94.770	ENSCJAG00000012631	SCAF8	94	94.770	Callithrix_jacchus
ENSCLAG00000004910	SCAF8	100	94.612	ENSCAFG00000000570	SCAF8	99	94.612	Canis_familiaris
ENSCLAG00000004910	SCAF8	100	94.612	ENSCAFG00020015048	SCAF8	98	94.612	Canis_lupus_dingo
ENSCLAG00000004910	SCAF8	100	93.810	ENSCHIG00000025041	SCAF8	100	93.439	Capra_hircus
ENSCLAG00000004910	SCAF8	100	94.691	ENSTSYG00000010991	SCAF8	97	94.691	Carlito_syrichta
ENSCLAG00000004910	SCAF8	89	70.882	ENSCAPG00000003300	SCAF8	97	75.406	Cavia_aperea
ENSCLAG00000004910	SCAF8	100	90.190	ENSCPOG00000022216	-	99	89.399	Cavia_porcellus
ENSCLAG00000004910	SCAF8	100	94.532	ENSCCAG00000024952	SCAF8	100	94.025	Cebus_capucinus
ENSCLAG00000004910	SCAF8	100	95.563	ENSCATG00000035361	SCAF8	100	95.047	Cercocebus_atys
ENSCLAG00000004910	SCAF8	100	95.563	ENSCSAG00000013430	SCAF8	98	95.563	Chlorocebus_sabaeus
ENSCLAG00000004910	SCAF8	100	95.325	ENSCANG00000039499	SCAF8	99	95.325	Colobus_angolensis_palliatus
ENSCLAG00000004910	SCAF8	100	91.819	ENSCGRG00001020167	Scaf8	100	91.562	Cricetulus_griseus_chok1gshd
ENSCLAG00000004910	SCAF8	100	91.819	ENSCGRG00000004120	Scaf8	99	91.819	Cricetulus_griseus_crigri
ENSCLAG00000004910	SCAF8	87	65.610	ENSCSEG00000000043	-	78	66.386	Cynoglossus_semilaevis
ENSCLAG00000004910	SCAF8	82	66.144	ENSCVAG00000000925	SCAF8	77	65.405	Cyprinodon_variegatus
ENSCLAG00000004910	SCAF8	97	88.105	ENSDNOG00000025271	SCAF8	100	91.715	Dasypus_novemcinctus
ENSCLAG00000004910	SCAF8	100	92.563	ENSDORG00000006391	Scaf8	99	92.642	Dipodomys_ordii
ENSCLAG00000004910	SCAF8	100	94.607	ENSEASG00005018879	SCAF8	100	94.025	Equus_asinus_asinus
ENSCLAG00000004910	SCAF8	100	94.687	ENSECAG00000005540	SCAF8	100	94.178	Equus_caballus
ENSCLAG00000004910	SCAF8	82	69.423	ENSELUG00000002779	SCAF8	73	68.305	Esox_lucius
ENSCLAG00000004910	SCAF8	100	95.004	ENSFCAG00000023424	SCAF8	100	94.493	Felis_catus
ENSCLAG00000004910	SCAF8	100	78.667	ENSFALG00000012433	SCAF8	99	78.762	Ficedula_albicollis
ENSCLAG00000004910	SCAF8	100	97.462	ENSFDAG00000010335	SCAF8	100	97.400	Fukomys_damarensis
ENSCLAG00000004910	SCAF8	91	68.005	ENSFHEG00000008284	SCAF8	77	66.954	Fundulus_heteroclitus
ENSCLAG00000004910	SCAF8	80	56.380	ENSGMOG00000018812	SCAF8	83	57.828	Gadus_morhua
ENSCLAG00000004910	SCAF8	100	79.702	ENSGALG00000013635	SCAF8	98	79.310	Gallus_gallus
ENSCLAG00000004910	SCAF8	92	67.578	ENSGAFG00000018033	SCAF8	78	63.926	Gambusia_affinis
ENSCLAG00000004910	SCAF8	93	52.980	ENSGACG00000006909	SCAF8	100	53.979	Gasterosteus_aculeatus
ENSCLAG00000004910	SCAF8	63	72.291	ENSGAGG00000017820	-	88	72.291	Gopherus_agassizii
ENSCLAG00000004910	SCAF8	100	95.563	ENSGGOG00000008645	SCAF8	100	95.047	Gorilla_gorilla
ENSCLAG00000004910	SCAF8	86	68.681	ENSHBUG00000019537	SCAF8	80	67.805	Haplochromis_burtoni
ENSCLAG00000004910	SCAF8	100	96.907	ENSHGLG00000003619	SCAF8	100	96.381	Heterocephalus_glaber_female
ENSCLAG00000004910	SCAF8	100	96.907	ENSHGLG00100004708	SCAF8	100	96.907	Heterocephalus_glaber_male
ENSCLAG00000004910	SCAF8	100	95.959	ENSSTOG00000026043	SCAF8	99	95.959	Ictidomys_tridecemlineatus
ENSCLAG00000004910	SCAF8	100	93.175	ENSJJAG00000020480	Scaf8	99	93.175	Jaculus_jaculus
ENSCLAG00000004910	SCAF8	87	67.600	ENSKMAG00000012767	SCAF8	78	66.787	Kryptolebias_marmoratus
ENSCLAG00000004910	SCAF8	67	75.926	ENSLBEG00000012484	-	63	76.071	Labrus_bergylta
ENSCLAG00000004910	SCAF8	54	42.250	ENSLACG00000013913	SCAF4	61	48.921	Latimeria_chalumnae
ENSCLAG00000004910	SCAF8	100	60.835	ENSLOCG00000016856	SCAF8	100	59.812	Lepisosteus_oculatus
ENSCLAG00000004910	SCAF8	100	92.247	ENSLAFG00000000022	SCAF8	100	92.308	Loxodonta_africana
ENSCLAG00000004910	SCAF8	100	95.563	ENSMFAG00000032738	SCAF8	100	95.047	Macaca_fascicularis
ENSCLAG00000004910	SCAF8	100	95.563	ENSMMUG00000015163	SCAF8	100	95.047	Macaca_mulatta
ENSCLAG00000004910	SCAF8	100	95.563	ENSMNEG00000043466	SCAF8	100	95.047	Macaca_nemestrina
ENSCLAG00000004910	SCAF8	100	95.721	ENSMLEG00000034845	SCAF8	99	95.721	Mandrillus_leucophaeus
ENSCLAG00000004910	SCAF8	84	64.923	ENSMAMG00000009457	SCAF8	76	64.031	Mastacembelus_armatus
ENSCLAG00000004910	SCAF8	86	68.681	ENSMZEG00005005698	SCAF8	80	67.805	Maylandia_zebra
ENSCLAG00000004910	SCAF8	100	78.560	ENSMGAG00000012762	SCAF8	99	79.141	Meleagris_gallopavo
ENSCLAG00000004910	SCAF8	100	91.025	ENSMAUG00000009513	Scaf8	100	91.025	Mesocricetus_auratus
ENSCLAG00000004910	SCAF8	100	93.983	ENSMICG00000028965	SCAF8	100	93.323	Microcebus_murinus
ENSCLAG00000004910	SCAF8	100	92.295	ENSMOCG00000014950	Scaf8	100	91.805	Microtus_ochrogaster
ENSCLAG00000004910	SCAF8	85	64.115	ENSMMOG00000002216	SCAF8	78	63.191	Mola_mola
ENSCLAG00000004910	SCAF8	100	85.669	ENSMODG00000008301	SCAF8	99	85.669	Monodelphis_domestica
ENSCLAG00000004910	SCAF8	86	68.064	ENSMALG00000011584	SCAF8	78	67.818	Monopterus_albus
ENSCLAG00000004910	SCAF8	100	91.501	MGP_CAROLIEiJ_G0021016	Scaf8	100	91.017	Mus_caroli
ENSCLAG00000004910	SCAF8	100	91.422	ENSMUSG00000046201	Scaf8	100	90.938	Mus_musculus
ENSCLAG00000004910	SCAF8	100	91.978	MGP_PahariEiJ_G0023334	Scaf8	100	91.489	Mus_pahari
ENSCLAG00000004910	SCAF8	100	94.211	ENSMPUG00000001974	SCAF8	98	94.211	Mustela_putorius_furo
ENSCLAG00000004910	SCAF8	100	92.228	ENSMLUG00000029190	SCAF8	99	92.228	Myotis_lucifugus
ENSCLAG00000004910	SCAF8	100	92.851	ENSNGAG00000012332	Scaf8	100	92.356	Nannospalax_galili
ENSCLAG00000004910	SCAF8	95	63.791	ENSNBRG00000009067	SCAF8	100	51.588	Neolamprologus_brichardi
ENSCLAG00000004910	SCAF8	100	94.229	ENSNLEG00000015509	SCAF8	99	94.229	Nomascus_leucogenys
ENSCLAG00000004910	SCAF8	70	93.750	ENSOPRG00000018413	-	76	94.949	Ochotona_princeps
ENSCLAG00000004910	SCAF8	100	97.861	ENSODEG00000007296	SCAF8	100	97.327	Octodon_degus
ENSCLAG00000004910	SCAF8	100	54.574	ENSONIG00000008119	SCAF8	99	54.595	Oreochromis_niloticus
ENSCLAG00000004910	SCAF8	100	95.642	ENSOCUG00000026063	SCAF8	99	95.642	Oryctolagus_cuniculus
ENSCLAG00000004910	SCAF8	86	68.199	ENSORLG00000017358	SCAF8	78	67.730	Oryzias_latipes
ENSCLAG00000004910	SCAF8	86	68.323	ENSORLG00020002214	SCAF8	78	67.853	Oryzias_latipes_hni
ENSCLAG00000004910	SCAF8	86	68.447	ENSORLG00015015779	SCAF8	78	67.975	Oryzias_latipes_hsok
ENSCLAG00000004910	SCAF8	86	68.323	ENSOMEG00000015471	SCAF8	77	68.323	Oryzias_melastigma
ENSCLAG00000004910	SCAF8	100	94.216	ENSOGAG00000034223	SCAF8	94	94.216	Otolemur_garnettii
ENSCLAG00000004910	SCAF8	100	93.730	ENSOARG00000004159	SCAF8	99	93.730	Ovis_aries
ENSCLAG00000004910	SCAF8	100	95.404	ENSPPAG00000039826	SCAF8	100	94.953	Pan_paniscus
ENSCLAG00000004910	SCAF8	100	95.083	ENSPPRG00000023175	SCAF8	100	94.571	Panthera_pardus
ENSCLAG00000004910	SCAF8	100	95.083	ENSPTIG00000014836	SCAF8	99	95.083	Panthera_tigris_altaica
ENSCLAG00000004910	SCAF8	100	95.563	ENSPTRG00000018727	SCAF8	100	95.047	Pan_troglodytes
ENSCLAG00000004910	SCAF8	100	95.563	ENSPANG00000017489	SCAF8	100	93.858	Papio_anubis
ENSCLAG00000004910	SCAF8	100	56.009	ENSPKIG00000021212	SCAF8	100	55.882	Paramormyrops_kingsleyae
ENSCLAG00000004910	SCAF8	89	73.652	ENSPSIG00000008614	SCAF8	94	76.590	Pelodiscus_sinensis
ENSCLAG00000004910	SCAF8	100	92.216	ENSPEMG00000010531	Scaf8	100	92.216	Peromyscus_maniculatus_bairdii
ENSCLAG00000004910	SCAF8	100	86.302	ENSPCIG00000001141	SCAF8	100	85.860	Phascolarctos_cinereus
ENSCLAG00000004910	SCAF8	86	68.120	ENSPFOG00000004176	SCAF8	100	53.550	Poecilia_formosa
ENSCLAG00000004910	SCAF8	86	68.120	ENSPLAG00000021432	SCAF8	77	67.621	Poecilia_latipinna
ENSCLAG00000004910	SCAF8	86	68.120	ENSPMEG00000007591	SCAF8	84	67.181	Poecilia_mexicana
ENSCLAG00000004910	SCAF8	86	67.995	ENSPREG00000000652	SCAF8	77	67.497	Poecilia_reticulata
ENSCLAG00000004910	SCAF8	100	93.908	ENSPPYG00000017121	SCAF8	100	93.093	Pongo_abelii
ENSCLAG00000004910	SCAF8	85	96.934	ENSPCAG00000013044	SCAF8	89	96.934	Procavia_capensis
ENSCLAG00000004910	SCAF8	100	94.537	ENSPCOG00000002067	SCAF8	99	94.378	Propithecus_coquereli
ENSCLAG00000004910	SCAF8	98	90.894	ENSPVAG00000005582	SCAF8	100	91.527	Pteropus_vampyrus
ENSCLAG00000004910	SCAF8	86	68.804	ENSPNYG00000007277	SCAF8	80	67.927	Pundamilia_nyererei
ENSCLAG00000004910	SCAF8	87	67.075	ENSPNAG00000024740	SCAF8	82	66.868	Pygocentrus_nattereri
ENSCLAG00000004910	SCAF8	100	91.342	ENSRNOG00000016919	Scaf8	100	90.859	Rattus_norvegicus
ENSCLAG00000004910	SCAF8	100	95.325	ENSRBIG00000035769	SCAF8	100	94.811	Rhinopithecus_bieti
ENSCLAG00000004910	SCAF8	100	95.246	ENSRROG00000013580	SCAF8	100	94.733	Rhinopithecus_roxellana
ENSCLAG00000004910	SCAF8	100	94.612	ENSSBOG00000027023	SCAF8	100	94.104	Saimiri_boliviensis_boliviensis
ENSCLAG00000004910	SCAF8	100	85.601	ENSSHAG00000009915	SCAF8	100	85.165	Sarcophilus_harrisii
ENSCLAG00000004910	SCAF8	100	54.264	ENSSFOG00015009481	SCAF8	92	68.919	Scleropages_formosus
ENSCLAG00000004910	SCAF8	86	67.233	ENSSMAG00000008275	SCAF8	77	66.187	Scophthalmus_maximus
ENSCLAG00000004910	SCAF8	100	76.976	ENSSPUG00000015219	SCAF8	100	76.528	Sphenodon_punctatus
ENSCLAG00000004910	SCAF8	100	94.528	ENSSSCG00000004070	SCAF8	100	94.462	Sus_scrofa
ENSCLAG00000004910	SCAF8	100	79.560	ENSTGUG00000011151	SCAF8	99	79.796	Taeniopygia_guttata
ENSCLAG00000004910	SCAF8	86	66.667	ENSTRUG00000009243	SCAF8	78	66.178	Takifugu_rubripes
ENSCLAG00000004910	SCAF8	89	68.449	ENSTNIG00000016885	SCAF8	99	69.089	Tetraodon_nigroviridis
ENSCLAG00000004910	SCAF8	100	93.814	ENSTTRG00000014538	SCAF8	100	93.814	Tursiops_truncatus
ENSCLAG00000004910	SCAF8	100	94.132	ENSUAMG00000024736	SCAF8	99	94.132	Ursus_americanus
ENSCLAG00000004910	SCAF8	99	94.141	ENSUMAG00000013404	SCAF8	100	94.141	Ursus_maritimus
ENSCLAG00000004910	SCAF8	68	84.302	ENSVPAG00000012465	SCAF8	99	83.218	Vicugna_pacos
ENSCLAG00000004910	SCAF8	100	94.766	ENSVVUG00000007532	SCAF8	100	94.703	Vulpes_vulpes
ENSCLAG00000004910	SCAF8	100	61.581	ENSXETG00000013132	scaf8	99	61.599	Xenopus_tropicalis
ENSCLAG00000004910	SCAF8	86	67.995	ENSXMAG00000019192	SCAF8	78	67.159	Xiphophorus_maculatus