EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000004960 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 763 bases
Position: chrJH721906.1:2803183-2803945
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007045	FRG1	PF06229.12	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007157	-	723	-	ENSCLAP00000007045	240 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000004960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000004960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000004960	-	100	59.756	ENSCLAG00000006068	-	100	58.537
ENSCLAG00000004960	-	100	82.171	ENSCLAG00000000370	-	100	82.171
ENSCLAG00000004960	-	99	61.446	ENSCLAG00000009263	-	100	61.446

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000004960	-	100	82.171	ENSG00000109536	FRG1	100	88.793	Homo_sapiens
ENSCLAG00000004960	-	100	60.853	ENSAPOG00000001060	frg1	100	59.690	Acanthochromis_polyacanthus
ENSCLAG00000004960	-	100	82.558	ENSAMEG00000013503	FRG1	100	82.558	Ailuropoda_melanoleuca
ENSCLAG00000004960	-	85	62.780	ENSACIG00000022283	frg1	98	61.644	Amphilophus_citrinellus
ENSCLAG00000004960	-	85	60.987	ENSAOCG00000024240	frg1	85	60.731	Amphiprion_ocellaris
ENSCLAG00000004960	-	100	60.078	ENSAPEG00000002486	frg1	100	58.915	Amphiprion_percula
ENSCLAG00000004960	-	100	58.915	ENSATEG00000010414	frg1	100	57.752	Anabas_testudineus
ENSCLAG00000004960	-	100	70.930	ENSAPLG00000007785	-	100	71.318	Anas_platyrhynchos
ENSCLAG00000004960	-	100	66.667	ENSACAG00000006877	-	100	66.279	Anolis_carolinensis
ENSCLAG00000004960	-	100	81.008	ENSANAG00000020876	FRG1	100	80.620	Aotus_nancymaae
ENSCLAG00000004960	-	100	55.172	ENSACLG00000027065	frg1	100	54.406	Astatotilapia_calliptera
ENSCLAG00000004960	-	100	62.016	ENSAMXG00000032700	frg1	100	61.240	Astyanax_mexicanus
ENSCLAG00000004960	-	100	82.558	ENSBTAG00000007089	FRG1	100	82.558	Bos_taurus
ENSCLAG00000004960	-	99	34.191	WBGene00014177	frg-1	82	34.802	Caenorhabditis_elegans
ENSCLAG00000004960	-	100	81.008	ENSCJAG00000011272	FRG1	100	80.620	Callithrix_jacchus
ENSCLAG00000004960	-	100	82.558	ENSCAFG00000007135	FRG1	100	82.558	Canis_familiaris
ENSCLAG00000004960	-	81	83.568	ENSCAFG00020000082	-	85	83.568	Canis_lupus_dingo
ENSCLAG00000004960	-	100	82.558	ENSCHIG00000011585	-	100	82.558	Capra_hircus
ENSCLAG00000004960	-	98	64.228	ENSTSYG00000031599	-	99	63.415	Carlito_syrichta
ENSCLAG00000004960	-	86	84.889	ENSCAPG00000016056	-	90	84.545	Cavia_aperea
ENSCLAG00000004960	-	100	81.783	ENSCPOG00000022277	-	100	81.783	Cavia_porcellus
ENSCLAG00000004960	-	100	81.008	ENSCCAG00000024627	FRG1	100	80.620	Cebus_capucinus
ENSCLAG00000004960	-	100	81.783	ENSCATG00000029230	FRG1	100	81.783	Cercocebus_atys
ENSCLAG00000004960	-	82	77.209	ENSCSAG00000017729	-	99	77.209	Chlorocebus_sabaeus
ENSCLAG00000004960	-	100	81.783	ENSCSAG00000002899	FRG1	100	81.783	Chlorocebus_sabaeus
ENSCLAG00000004960	-	86	72.444	ENSCPBG00000009211	-	85	73.059	Chrysemys_picta_bellii
ENSCLAG00000004960	-	88	45.106	ENSCING00000005161	-	99	43.284	Ciona_intestinalis
ENSCLAG00000004960	-	58	49.275	ENSCSAVG00000008018	-	100	44.211	Ciona_savignyi
ENSCLAG00000004960	-	100	81.783	ENSCANG00000020991	FRG1	100	81.783	Colobus_angolensis_palliatus
ENSCLAG00000004960	-	100	81.395	ENSCGRG00001014998	Frg1	100	81.395	Cricetulus_griseus_chok1gshd
ENSCLAG00000004960	-	100	81.395	ENSCGRG00000011860	-	100	81.395	Cricetulus_griseus_crigri
ENSCLAG00000004960	-	100	66.403	ENSCGRG00000003902	-	96	66.008	Cricetulus_griseus_crigri
ENSCLAG00000004960	-	97	57.377	ENSCSEG00000015950	frg1	99	57.377	Cynoglossus_semilaevis
ENSCLAG00000004960	-	100	59.302	ENSCVAG00000009985	frg1	100	58.527	Cyprinodon_variegatus
ENSCLAG00000004960	-	100	62.791	ENSDARG00000056504	frg1	100	61.240	Danio_rerio
ENSCLAG00000004960	-	100	81.395	ENSDNOG00000014886	FRG1	100	81.395	Dasypus_novemcinctus
ENSCLAG00000004960	-	100	74.206	ENSDORG00000016190	Frg1	100	74.603	Dipodomys_ordii
ENSCLAG00000004960	-	82	41.860	FBgn0036964	FRG1	100	41.288	Drosophila_melanogaster
ENSCLAG00000004960	-	100	79.845	ENSETEG00000012349	-	100	79.845	Echinops_telfairi
ENSCLAG00000004960	-	62	52.703	ENSEBUG00000014053	frg1	75	53.521	Eptatretus_burgeri
ENSCLAG00000004960	-	100	79.457	ENSEASG00005017497	FRG1	100	80.233	Equus_asinus_asinus
ENSCLAG00000004960	-	100	79.457	ENSECAG00000003122	FRG1	100	80.233	Equus_caballus
ENSCLAG00000004960	-	60	81.290	ENSEEUG00000000145	-	99	81.290	Erinaceus_europaeus
ENSCLAG00000004960	-	100	61.240	ENSELUG00000021712	frg1	100	60.078	Esox_lucius
ENSCLAG00000004960	-	100	82.558	ENSFCAG00000025737	FRG1	100	82.558	Felis_catus
ENSCLAG00000004960	-	85	71.300	ENSFALG00000011231	-	85	72.146	Ficedula_albicollis
ENSCLAG00000004960	-	100	81.008	ENSFDAG00000000962	-	100	81.783	Fukomys_damarensis
ENSCLAG00000004960	-	100	76.772	ENSFDAG00000012697	-	100	76.378	Fukomys_damarensis
ENSCLAG00000004960	-	100	59.690	ENSFHEG00000010540	frg1	100	58.527	Fundulus_heteroclitus
ENSCLAG00000004960	-	100	58.140	ENSGMOG00000000867	frg1	100	57.752	Gadus_morhua
ENSCLAG00000004960	-	100	70.543	ENSGALG00000013590	-	100	70.543	Gallus_gallus
ENSCLAG00000004960	-	84	60.680	ENSGAFG00000013855	frg1	97	60.099	Gambusia_affinis
ENSCLAG00000004960	-	100	58.527	ENSGACG00000016888	frg1	100	57.364	Gasterosteus_aculeatus
ENSCLAG00000004960	-	100	69.767	ENSGAGG00000025012	-	100	70.155	Gopherus_agassizii
ENSCLAG00000004960	-	100	52.273	ENSGGOG00000040796	-	100	52.273	Gorilla_gorilla
ENSCLAG00000004960	-	68	78.443	ENSGGOG00000012888	-	84	78.443	Gorilla_gorilla
ENSCLAG00000004960	-	100	60.078	ENSHBUG00000010667	frg1	100	59.302	Haplochromis_burtoni
ENSCLAG00000004960	-	99	76.265	ENSHGLG00000020943	-	99	75.875	Heterocephalus_glaber_female
ENSCLAG00000004960	-	100	81.395	ENSHGLG00000005601	FRG1	100	81.008	Heterocephalus_glaber_female
ENSCLAG00000004960	-	100	69.512	ENSHGLG00000001211	-	100	69.512	Heterocephalus_glaber_female
ENSCLAG00000004960	-	99	77.432	ENSHGLG00000020402	-	94	77.043	Heterocephalus_glaber_female
ENSCLAG00000004960	-	100	63.178	ENSHGLG00100015285	-	100	63.178	Heterocephalus_glaber_male
ENSCLAG00000004960	-	100	69.919	ENSHGLG00100010674	-	100	69.919	Heterocephalus_glaber_male
ENSCLAG00000004960	-	99	76.265	ENSHGLG00100021211	-	99	75.875	Heterocephalus_glaber_male
ENSCLAG00000004960	-	100	81.008	ENSHGLG00100016261	-	100	80.620	Heterocephalus_glaber_male
ENSCLAG00000004960	-	85	60.538	ENSHCOG00000000224	frg1	94	60.000	Hippocampus_comes
ENSCLAG00000004960	-	100	64.729	ENSIPUG00000022716	frg1	100	64.341	Ictalurus_punctatus
ENSCLAG00000004960	-	100	81.395	ENSSTOG00000002857	-	100	81.395	Ictidomys_tridecemlineatus
ENSCLAG00000004960	-	100	81.783	ENSJJAG00000020625	Frg1	100	81.783	Jaculus_jaculus
ENSCLAG00000004960	-	100	58.140	ENSKMAG00000005841	frg1	100	57.364	Kryptolebias_marmoratus
ENSCLAG00000004960	-	100	58.527	ENSLBEG00000001466	frg1	100	57.364	Labrus_bergylta
ENSCLAG00000004960	-	100	59.924	ENSLACG00000010243	frg1	100	59.924	Latimeria_chalumnae
ENSCLAG00000004960	-	100	62.403	ENSLOCG00000013868	frg1	100	62.791	Lepisosteus_oculatus
ENSCLAG00000004960	-	100	81.395	ENSLAFG00000011191	FRG1	100	81.395	Loxodonta_africana
ENSCLAG00000004960	-	81	73.953	ENSMFAG00000042873	-	89	73.953	Macaca_fascicularis
ENSCLAG00000004960	-	100	81.783	ENSMFAG00000031178	FRG1	100	81.783	Macaca_fascicularis
ENSCLAG00000004960	-	78	75.124	ENSMMUG00000047496	-	87	75.124	Macaca_mulatta
ENSCLAG00000004960	-	100	81.783	ENSMMUG00000001824	FRG1	100	81.783	Macaca_mulatta
ENSCLAG00000004960	-	97	78.243	ENSMNEG00000018620	FRG1	99	78.243	Macaca_nemestrina
ENSCLAG00000004960	-	100	81.783	ENSMLEG00000028881	FRG1	100	81.783	Mandrillus_leucophaeus
ENSCLAG00000004960	-	100	59.302	ENSMAMG00000012406	frg1	100	58.915	Mastacembelus_armatus
ENSCLAG00000004960	-	100	59.690	ENSMZEG00005007549	frg1	100	58.915	Maylandia_zebra
ENSCLAG00000004960	-	100	70.930	ENSMGAG00000011481	-	100	70.930	Meleagris_gallopavo
ENSCLAG00000004960	-	100	82.171	ENSMAUG00000000847	Frg1	100	82.171	Mesocricetus_auratus
ENSCLAG00000004960	-	100	82.558	ENSMICG00000046816	FRG1	100	82.558	Microcebus_murinus
ENSCLAG00000004960	-	100	74.419	ENSMOCG00000023000	Frg1	100	74.419	Microtus_ochrogaster
ENSCLAG00000004960	-	85	60.090	ENSMMOG00000004008	frg1	93	59.361	Mola_mola
ENSCLAG00000004960	-	100	76.744	ENSMODG00000019031	-	87	76.744	Monodelphis_domestica
ENSCLAG00000004960	-	100	61.628	ENSMALG00000018497	frg1	100	59.690	Monopterus_albus
ENSCLAG00000004960	-	100	81.783	MGP_CAROLIEiJ_G0031006	Frg1	100	81.783	Mus_caroli
ENSCLAG00000004960	-	100	81.783	ENSMUSG00000031590	Frg1	100	81.783	Mus_musculus
ENSCLAG00000004960	-	100	81.783	MGP_PahariEiJ_G0021475	Frg1	100	81.783	Mus_pahari
ENSCLAG00000004960	-	100	81.395	MGP_SPRETEiJ_G0032120	Frg1	100	81.395	Mus_spretus
ENSCLAG00000004960	-	100	82.558	ENSMPUG00000017962	FRG1	100	82.558	Mustela_putorius_furo
ENSCLAG00000004960	-	100	80.620	ENSMLUG00000023179	FRG1	100	80.233	Myotis_lucifugus
ENSCLAG00000004960	-	100	82.171	ENSNGAG00000016411	Frg1	100	82.171	Nannospalax_galili
ENSCLAG00000004960	-	84	60.194	ENSNBRG00000006806	frg1	93	58.852	Neolamprologus_brichardi
ENSCLAG00000004960	-	78	74.242	ENSNLEG00000028874	-	90	74.242	Nomascus_leucogenys
ENSCLAG00000004960	-	100	58.755	ENSNLEG00000032846	-	100	67.568	Nomascus_leucogenys
ENSCLAG00000004960	-	100	79.070	ENSNLEG00000000930	FRG1	100	79.845	Nomascus_leucogenys
ENSCLAG00000004960	-	100	69.732	ENSNLEG00000035849	-	100	70.881	Nomascus_leucogenys
ENSCLAG00000004960	-	78	75.253	ENSNLEG00000036059	-	85	75.253	Nomascus_leucogenys
ENSCLAG00000004960	-	100	70.588	ENSNLEG00000032333	-	100	69.804	Nomascus_leucogenys
ENSCLAG00000004960	-	56	72.368	ENSMEUG00000007509	-	59	72.368	Notamacropus_eugenii
ENSCLAG00000004960	-	100	72.868	ENSOPRG00000004722	-	100	72.868	Ochotona_princeps
ENSCLAG00000004960	-	100	82.171	ENSODEG00000006458	-	100	82.171	Octodon_degus
ENSCLAG00000004960	-	100	66.667	ENSODEG00000006953	-	100	66.667	Octodon_degus
ENSCLAG00000004960	-	100	59.459	ENSONIG00000010162	frg1	100	58.687	Oreochromis_niloticus
ENSCLAG00000004960	-	64	73.684	ENSOANG00000005659	-	76	73.684	Ornithorhynchus_anatinus
ENSCLAG00000004960	-	100	83.721	ENSOCUG00000009038	-	100	83.721	Oryctolagus_cuniculus
ENSCLAG00000004960	-	99	58.800	ENSORLG00000008106	frg1	89	58.800	Oryzias_latipes
ENSCLAG00000004960	-	100	58.527	ENSORLG00020014355	frg1	100	57.752	Oryzias_latipes_hni
ENSCLAG00000004960	-	100	58.527	ENSORLG00015014159	frg1	100	57.752	Oryzias_latipes_hsok
ENSCLAG00000004960	-	83	64.039	ENSOMEG00000002468	frg1	83	64.039	Oryzias_melastigma
ENSCLAG00000004960	-	100	81.395	ENSOGAG00000005749	-	100	81.395	Otolemur_garnettii
ENSCLAG00000004960	-	100	80.077	ENSOARG00000008592	FRG1	100	80.077	Ovis_aries
ENSCLAG00000004960	-	97	60.800	ENSPPAG00000043174	-	99	60.800	Pan_paniscus
ENSCLAG00000004960	-	84	85.922	ENSPPAG00000043170	-	94	86.765	Pan_paniscus
ENSCLAG00000004960	-	100	82.558	ENSPPRG00000025003	-	100	82.558	Panthera_pardus
ENSCLAG00000004960	-	100	79.845	ENSPPRG00000019777	-	100	79.457	Panthera_pardus
ENSCLAG00000004960	-	100	81.783	ENSPTIG00000006588	-	100	81.783	Panthera_tigris_altaica
ENSCLAG00000004960	-	100	80.233	ENSPTIG00000006566	-	100	79.845	Panthera_tigris_altaica
ENSCLAG00000004960	-	90	66.376	ENSPTRG00000050204	-	94	66.376	Pan_troglodytes
ENSCLAG00000004960	-	100	82.171	ENSPTRG00000050205	-	100	82.171	Pan_troglodytes
ENSCLAG00000004960	-	97	67.635	ENSPTRG00000044710	-	99	67.635	Pan_troglodytes
ENSCLAG00000004960	-	91	71.681	ENSPTRG00000043123	-	94	71.930	Pan_troglodytes
ENSCLAG00000004960	-	96	65.289	ENSPTRG00000052363	-	97	69.524	Pan_troglodytes
ENSCLAG00000004960	-	100	82.171	ENSPTRG00000016671	-	100	82.171	Pan_troglodytes
ENSCLAG00000004960	-	73	77.222	ENSPANG00000031530	-	84	77.222	Papio_anubis
ENSCLAG00000004960	-	100	57.364	ENSPKIG00000024189	frg1	100	58.915	Paramormyrops_kingsleyae
ENSCLAG00000004960	-	83	71.759	ENSPSIG00000017971	-	82	71.759	Pelodiscus_sinensis
ENSCLAG00000004960	-	97	56.327	ENSPMGG00000019273	frg1	97	56.327	Periophthalmus_magnuspinnatus
ENSCLAG00000004960	-	100	81.783	ENSPEMG00000000650	Frg1	100	81.783	Peromyscus_maniculatus_bairdii
ENSCLAG00000004960	-	100	75.194	ENSPCIG00000007530	-	69	75.194	Phascolarctos_cinereus
ENSCLAG00000004960	-	100	58.687	ENSPFOG00000006721	frg1	100	57.915	Poecilia_formosa
ENSCLAG00000004960	-	100	57.364	ENSPMEG00000013816	frg1	100	56.202	Poecilia_mexicana
ENSCLAG00000004960	-	99	58.000	ENSPREG00000000097	frg1	100	55.426	Poecilia_reticulata
ENSCLAG00000004960	-	60	74.839	ENSPPYG00000011275	-	87	73.292	Pongo_abelii
ENSCLAG00000004960	-	58	85.315	ENSPPYG00000029810	-	99	85.315	Pongo_abelii
ENSCLAG00000004960	-	97	78.689	ENSPCAG00000014953	-	99	78.689	Procavia_capensis
ENSCLAG00000004960	-	100	65.833	ENSPCOG00000022726	FRG1	100	65.833	Propithecus_coquereli
ENSCLAG00000004960	-	100	68.605	ENSPVAG00000010551	FRG1	100	68.605	Pteropus_vampyrus
ENSCLAG00000004960	-	64	59.649	ENSPNYG00000015209	frg1	74	58.480	Pundamilia_nyererei
ENSCLAG00000004960	-	100	60.078	ENSPNAG00000013259	frg1	100	59.302	Pygocentrus_nattereri
ENSCLAG00000004960	-	100	80.233	ENSRNOG00000009846	Frg1	100	80.233	Rattus_norvegicus
ENSCLAG00000004960	-	89	82.222	ENSRBIG00000042219	-	94	82.222	Rhinopithecus_bieti
ENSCLAG00000004960	-	81	76.995	ENSRROG00000032084	-	88	76.995	Rhinopithecus_roxellana
ENSCLAG00000004960	-	100	81.423	ENSRROG00000015523	FRG1	100	81.423	Rhinopithecus_roxellana
ENSCLAG00000004960	-	100	80.620	ENSSBOG00000034175	FRG1	100	80.233	Saimiri_boliviensis_boliviensis
ENSCLAG00000004960	-	100	76.744	ENSSHAG00000005886	-	100	76.744	Sarcophilus_harrisii
ENSCLAG00000004960	-	100	62.302	ENSSFOG00015021361	frg1	99	61.508	Scleropages_formosus
ENSCLAG00000004960	-	100	58.140	ENSSMAG00000001213	frg1	100	56.977	Scophthalmus_maximus
ENSCLAG00000004960	-	100	58.915	ENSSDUG00000018886	frg1	100	57.364	Seriola_dumerili
ENSCLAG00000004960	-	100	58.915	ENSSLDG00000024191	frg1	100	58.140	Seriola_lalandi_dorsalis
ENSCLAG00000004960	-	68	86.310	ENSSARG00000002471	-	89	86.310	Sorex_araneus
ENSCLAG00000004960	-	100	64.122	ENSSPUG00000017326	-	94	72.330	Sphenodon_punctatus
ENSCLAG00000004960	-	100	55.814	ENSSPAG00000013294	frg1	100	55.039	Stegastes_partitus
ENSCLAG00000004960	-	100	82.171	ENSSSCG00000006996	FRG1	100	82.171	Sus_scrofa
ENSCLAG00000004960	-	100	68.992	ENSTGUG00000007028	-	100	69.380	Taeniopygia_guttata
ENSCLAG00000004960	-	100	60.078	ENSTRUG00000016208	frg1	100	59.302	Takifugu_rubripes
ENSCLAG00000004960	-	100	59.302	ENSTNIG00000007128	frg1	100	58.527	Tetraodon_nigroviridis
ENSCLAG00000004960	-	78	55.914	ENSTBEG00000017605	-	98	55.914	Tupaia_belangeri
ENSCLAG00000004960	-	81	58.095	ENSTBEG00000012789	-	100	58.095	Tupaia_belangeri
ENSCLAG00000004960	-	100	80.620	ENSTBEG00000014491	-	100	80.620	Tupaia_belangeri
ENSCLAG00000004960	-	100	81.783	ENSTTRG00000003429	FRG1	100	81.783	Tursiops_truncatus
ENSCLAG00000004960	-	97	77.459	ENSUAMG00000012123	-	99	77.459	Ursus_americanus
ENSCLAG00000004960	-	100	82.558	ENSUMAG00000021119	FRG1	100	82.558	Ursus_maritimus
ENSCLAG00000004960	-	86	83.111	ENSVPAG00000011977	-	93	83.182	Vicugna_pacos
ENSCLAG00000004960	-	100	82.609	ENSVPAG00000000616	FRG1	100	82.609	Vicugna_pacos
ENSCLAG00000004960	-	81	83.568	ENSVVUG00000007181	-	77	83.568	Vulpes_vulpes
ENSCLAG00000004960	-	100	65.504	ENSXETG00000012470	frg1	100	65.504	Xenopus_tropicalis
ENSCLAG00000004960	-	100	54.264	ENSXCOG00000005312	frg1	100	53.488	Xiphophorus_couchianus
ENSCLAG00000004960	-	100	56.589	ENSXMAG00000007751	frg1	100	55.426	Xiphophorus_maculatus