EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005024 (Gene tree)
Gene ID: 102014094
Gene Symbol: SREK1
Alias: DKFZp564B176|SFRS12|SRrp508|SRrp86
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 38726 bases
Position: chrJH721906.1:2908587-2947312
Accession: 102014094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007142	RRM_1	PF00076.22	8.9e-22	1	2
ENSCLAP00000007142	RRM_1	PF00076.22	8.9e-22	2	2
ENSCLAP00000007141	RRM_1	PF00076.22	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007253	SREK1-201	4591	XM_005392611	ENSCLAP00000007141	512 (aa)	XP_005392668	UPI00038EB9D7
ENSCLAT00000007254	SREK1-202	1830	XM_005392605	ENSCLAP00000007142	609 (aa)	XP_005392662	-

Gene Model

Click here to download ENSCLAG00000005024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005024	SREK1	100	95.898	ENSG00000153914	SREK1	100	100.000	Homo_sapiens
ENSCLAG00000005024	SREK1	100	96.304	ENSAMEG00000011327	SREK1	98	90.422	Ailuropoda_melanoleuca
ENSCLAG00000005024	SREK1	63	56.716	ENSATEG00000009450	srek1	50	75.743	Anabas_testudineus
ENSCLAG00000005024	SREK1	58	89.859	ENSAPLG00000003948	-	84	90.616	Anas_platyrhynchos
ENSCLAG00000005024	SREK1	100	95.914	ENSANAG00000031358	SREK1	98	95.918	Aotus_nancymaae
ENSCLAG00000005024	SREK1	60	72.207	ENSAMXG00000043877	srek1	57	81.469	Astyanax_mexicanus
ENSCLAG00000005024	SREK1	100	93.798	ENSBTAG00000007321	SREK1	98	96.939	Bos_taurus
ENSCLAG00000005024	SREK1	100	96.304	ENSCJAG00000015950	SREK1	100	96.304	Callithrix_jacchus
ENSCLAG00000005024	SREK1	100	96.484	ENSCAFG00000007560	SREK1	100	96.484	Canis_familiaris
ENSCLAG00000005024	SREK1	100	96.304	ENSTSYG00000036957	SREK1	98	98.980	Carlito_syrichta
ENSCLAG00000005024	SREK1	70	97.834	ENSCPOG00000008925	SREK1	100	87.849	Cavia_porcellus
ENSCLAG00000005024	SREK1	100	96.109	ENSCCAG00000020591	SREK1	100	95.914	Cebus_capucinus
ENSCLAG00000005024	SREK1	100	95.720	ENSCATG00000031482	SREK1	98	97.959	Cercocebus_atys
ENSCLAG00000005024	SREK1	66	90.476	ENSCHOG00000004956	SREK1	64	90.476	Choloepus_hoffmanni
ENSCLAG00000005024	SREK1	51	92.557	ENSCPBG00000026866	SREK1	87	94.198	Chrysemys_picta_bellii
ENSCLAG00000005024	SREK1	100	95.525	ENSCANG00000030421	SREK1	98	97.959	Colobus_angolensis_palliatus
ENSCLAG00000005024	SREK1	97	88.796	ENSCGRG00001015222	-	97	88.963	Cricetulus_griseus_chok1gshd
ENSCLAG00000005024	SREK1	97	88.796	ENSCGRG00000002130	-	97	88.963	Cricetulus_griseus_crigri
ENSCLAG00000005024	SREK1	100	90.820	ENSDNOG00000010327	SREK1	98	88.599	Dasypus_novemcinctus
ENSCLAG00000005024	SREK1	100	73.096	ENSETEG00000012977	SREK1	100	73.096	Echinops_telfairi
ENSCLAG00000005024	SREK1	100	96.875	ENSFCAG00000040658	-	100	96.680	Felis_catus
ENSCLAG00000005024	SREK1	100	97.070	ENSFDAG00000017844	SREK1	100	97.070	Fukomys_damarensis
ENSCLAG00000005024	SREK1	75	91.444	ENSGAGG00000006087	SREK1	96	93.255	Gopherus_agassizii
ENSCLAG00000005024	SREK1	100	95.136	ENSGGOG00000004737	SREK1	98	97.959	Gorilla_gorilla
ENSCLAG00000005024	SREK1	100	98.242	ENSHGLG00000001181	SREK1	100	98.242	Heterocephalus_glaber_female
ENSCLAG00000005024	SREK1	100	96.289	ENSHGLG00100003207	SREK1	100	96.289	Heterocephalus_glaber_male
ENSCLAG00000005024	SREK1	64	66.925	ENSIPUG00000016851	srek1	54	80.071	Ictalurus_punctatus
ENSCLAG00000005024	SREK1	100	96.680	ENSSTOG00000008850	SREK1	100	96.680	Ictidomys_tridecemlineatus
ENSCLAG00000005024	SREK1	98	94.276	ENSLAFG00000013853	SREK1	98	91.582	Loxodonta_africana
ENSCLAG00000005024	SREK1	100	95.720	ENSMFAG00000039823	SREK1	98	97.959	Macaca_fascicularis
ENSCLAG00000005024	SREK1	100	95.720	ENSMMUG00000014586	SREK1	100	93.750	Macaca_mulatta
ENSCLAG00000005024	SREK1	100	95.720	ENSMNEG00000030723	SREK1	98	97.959	Macaca_nemestrina
ENSCLAG00000005024	SREK1	100	95.525	ENSMLEG00000039078	SREK1	98	97.959	Mandrillus_leucophaeus
ENSCLAG00000005024	SREK1	97	88.963	ENSMAUG00000010066	-	97	88.963	Mesocricetus_auratus
ENSCLAG00000005024	SREK1	100	96.498	ENSMICG00000034959	SREK1	100	96.498	Microcebus_murinus
ENSCLAG00000005024	SREK1	96	89.696	ENSMOCG00000001536	-	97	89.492	Microtus_ochrogaster
ENSCLAG00000005024	SREK1	97	82.972	ENSMODG00000019665	SREK1	98	81.697	Monodelphis_domestica
ENSCLAG00000005024	SREK1	67	59.497	ENSMALG00000017086	srek1	91	87.654	Monopterus_albus
ENSCLAG00000005024	SREK1	100	96.289	ENSMPUG00000014736	SREK1	98	90.879	Mustela_putorius_furo
ENSCLAG00000005024	SREK1	100	96.124	ENSMLUG00000014801	SREK1	100	96.124	Myotis_lucifugus
ENSCLAG00000005024	SREK1	100	95.914	ENSNLEG00000003827	SREK1	98	97.959	Nomascus_leucogenys
ENSCLAG00000005024	SREK1	88	88.037	ENSOPRG00000012111	SREK1	96	87.453	Ochotona_princeps
ENSCLAG00000005024	SREK1	97	96.008	ENSODEG00000016450	SREK1	100	96.008	Octodon_degus
ENSCLAG00000005024	SREK1	75	84.902	ENSOANG00000005029	SREK1	91	85.372	Ornithorhynchus_anatinus
ENSCLAG00000005024	SREK1	100	90.097	ENSOCUG00000001319	SREK1	97	91.776	Oryctolagus_cuniculus
ENSCLAG00000005024	SREK1	100	93.359	ENSOGAG00000016463	SREK1	100	93.359	Otolemur_garnettii
ENSCLAG00000005024	SREK1	100	92.636	ENSOARG00000006005	SREK1	98	87.742	Ovis_aries
ENSCLAG00000005024	SREK1	100	88.521	ENSPPAG00000031605	SREK1	92	100.000	Pan_paniscus
ENSCLAG00000005024	SREK1	100	93.555	ENSPPRG00000024617	SREK1	100	93.555	Panthera_pardus
ENSCLAG00000005024	SREK1	100	96.289	ENSPTIG00000006608	SREK1	98	88.762	Panthera_tigris_altaica
ENSCLAG00000005024	SREK1	100	95.331	ENSPTRG00000016936	SREK1	98	97.959	Pan_troglodytes
ENSCLAG00000005024	SREK1	100	95.720	ENSPANG00000008953	SREK1	98	97.959	Papio_anubis
ENSCLAG00000005024	SREK1	76	64.642	ENSPKIG00000025563	srek1	54	82.292	Paramormyrops_kingsleyae
ENSCLAG00000005024	SREK1	97	89.057	ENSPEMG00000024051	-	97	89.226	Peromyscus_maniculatus_bairdii
ENSCLAG00000005024	SREK1	100	95.914	ENSPPYG00000015515	SREK1	100	93.164	Pongo_abelii
ENSCLAG00000005024	SREK1	96	89.613	ENSPCAG00000004955	SREK1	100	82.149	Procavia_capensis
ENSCLAG00000005024	SREK1	100	96.109	ENSPCOG00000026230	SREK1	98	98.980	Propithecus_coquereli
ENSCLAG00000005024	SREK1	100	95.136	ENSPVAG00000009763	SREK1	82	94.942	Pteropus_vampyrus
ENSCLAG00000005024	SREK1	76	59.836	ENSPNAG00000004328	srek1	57	83.217	Pygocentrus_nattereri
ENSCLAG00000005024	SREK1	98	91.246	ENSRBIG00000033818	SREK1	98	97.959	Rhinopithecus_bieti
ENSCLAG00000005024	SREK1	100	95.720	ENSRROG00000017210	SREK1	98	97.959	Rhinopithecus_roxellana
ENSCLAG00000005024	SREK1	100	96.109	ENSSBOG00000031230	SREK1	100	95.914	Saimiri_boliviensis_boliviensis
ENSCLAG00000005024	SREK1	100	80.702	ENSSHAG00000003514	SREK1	100	81.600	Sarcophilus_harrisii
ENSCLAG00000005024	SREK1	64	72.980	ENSSFOG00015004995	srek1	97	52.341	Scleropages_formosus
ENSCLAG00000005024	SREK1	72	56.289	ENSSMAG00000011808	srek1	58	80.496	Scophthalmus_maximus
ENSCLAG00000005024	SREK1	76	96.512	ENSSARG00000000795	SREK1	70	96.089	Sorex_araneus
ENSCLAG00000005024	SREK1	100	96.505	ENSSSCG00000032726	SREK1	100	96.505	Sus_scrofa
ENSCLAG00000005024	SREK1	100	71.318	ENSTGUG00000002935	SREK1	100	67.704	Taeniopygia_guttata
ENSCLAG00000005024	SREK1	66	65.602	ENSTNIG00000013463	srek1	68	78.648	Tetraodon_nigroviridis
ENSCLAG00000005024	SREK1	100	96.498	ENSTTRG00000009684	SREK1	89	96.498	Tursiops_truncatus
ENSCLAG00000005024	SREK1	100	95.525	ENSUMAG00000008191	SREK1	98	89.251	Ursus_maritimus
ENSCLAG00000005024	SREK1	100	95.117	ENSVPAG00000008654	SREK1	100	90.783	Vicugna_pacos
ENSCLAG00000005024	SREK1	86	64.273	ENSXETG00000021460	srek1	73	69.949	Xenopus_tropicalis