EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005169 (Gene tree)
Gene ID: 102011903
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 20154 bases
Position: chrJH721895.1:7951841-7971994
Accession: 102011903
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007349	RRM_1	PF00076.22	1.1e-16	1	2
ENSCLAP00000007349	RRM_1	PF00076.22	1.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007466	RNPC3-201	1545	XM_005388813	ENSCLAP00000007349	515 (aa)	XP_005388870	UPI00038EA7EE

Gene Model

Click here to download ENSCLAG00000005169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005169	RNPC3	100	88.566	ENSG00000185946	RNPC3	100	90.270	Homo_sapiens
ENSCLAG00000005169	RNPC3	95	54.839	ENSAPOG00000017371	rnpc3	97	55.040	Acanthochromis_polyacanthus
ENSCLAG00000005169	RNPC3	98	87.623	ENSAMEG00000001694	RNPC3	100	87.500	Ailuropoda_melanoleuca
ENSCLAG00000005169	RNPC3	95	52.495	ENSACIG00000021043	rnpc3	97	51.163	Amphilophus_citrinellus
ENSCLAG00000005169	RNPC3	95	54.691	ENSAOCG00000014052	rnpc3	95	54.890	Amphiprion_ocellaris
ENSCLAG00000005169	RNPC3	95	54.491	ENSAPEG00000008739	rnpc3	95	54.691	Amphiprion_percula
ENSCLAG00000005169	RNPC3	95	53.200	ENSATEG00000021263	rnpc3	97	53.400	Anabas_testudineus
ENSCLAG00000005169	RNPC3	87	67.834	ENSAPLG00000015605	RNPC3	99	68.502	Anas_platyrhynchos
ENSCLAG00000005169	RNPC3	95	67.210	ENSACAG00000002029	RNPC3	98	66.601	Anolis_carolinensis
ENSCLAG00000005169	RNPC3	100	86.847	ENSANAG00000019950	RNPC3	100	86.847	Aotus_nancymaae
ENSCLAG00000005169	RNPC3	95	52.429	ENSACLG00000014702	rnpc3	96	51.473	Astatotilapia_calliptera
ENSCLAG00000005169	RNPC3	94	56.122	ENSAMXG00000033372	rnpc3	96	55.804	Astyanax_mexicanus
ENSCLAG00000005169	RNPC3	100	87.791	ENSBTAG00000019091	RNPC3	100	88.760	Bos_taurus
ENSCLAG00000005169	RNPC3	100	84.302	ENSCJAG00000035686	RNPC3	100	84.302	Callithrix_jacchus
ENSCLAG00000005169	RNPC3	100	86.486	ENSCAFG00000019972	RNPC3	100	86.486	Canis_familiaris
ENSCLAG00000005169	RNPC3	100	86.680	ENSCAFG00020011300	RNPC3	100	86.680	Canis_lupus_dingo
ENSCLAG00000005169	RNPC3	100	88.008	ENSCHIG00000020361	RNPC3	100	86.847	Capra_hircus
ENSCLAG00000005169	RNPC3	100	85.659	ENSTSYG00000030256	RNPC3	100	86.628	Carlito_syrichta
ENSCLAG00000005169	RNPC3	84	83.945	ENSCAPG00000013600	RNPC3	97	83.256	Cavia_aperea
ENSCLAG00000005169	RNPC3	100	91.683	ENSCPOG00000031638	RNPC3	100	91.683	Cavia_porcellus
ENSCLAG00000005169	RNPC3	100	86.847	ENSCCAG00000024301	RNPC3	100	86.847	Cebus_capucinus
ENSCLAG00000005169	RNPC3	99	86.602	ENSCATG00000002086	RNPC3	99	86.602	Cercocebus_atys
ENSCLAG00000005169	RNPC3	99	67.647	ENSCATG00000035930	-	99	66.145	Cercocebus_atys
ENSCLAG00000005169	RNPC3	99	86.408	ENSCSAG00000001519	RNPC3	99	86.408	Chlorocebus_sabaeus
ENSCLAG00000005169	RNPC3	97	68.898	ENSCPBG00000028311	RNPC3	97	68.898	Chrysemys_picta_bellii
ENSCLAG00000005169	RNPC3	93	37.628	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSCLAG00000005169	RNPC3	99	86.990	ENSCANG00000031444	RNPC3	99	86.990	Colobus_angolensis_palliatus
ENSCLAG00000005169	RNPC3	99	88.155	ENSCGRG00001019276	Rnpc3	100	87.184	Cricetulus_griseus_chok1gshd
ENSCLAG00000005169	RNPC3	87	88.470	ENSCGRG00000000053	Rnpc3	100	87.361	Cricetulus_griseus_crigri
ENSCLAG00000005169	RNPC3	94	51.318	ENSCSEG00000013475	rnpc3	96	51.181	Cynoglossus_semilaevis
ENSCLAG00000005169	RNPC3	94	52.277	ENSCVAG00000002645	rnpc3	97	51.625	Cyprinodon_variegatus
ENSCLAG00000005169	RNPC3	95	55.621	ENSDARG00000011247	rnpc3	90	65.868	Danio_rerio
ENSCLAG00000005169	RNPC3	100	86.240	ENSDNOG00000044555	-	100	87.209	Dasypus_novemcinctus
ENSCLAG00000005169	RNPC3	100	85.853	ENSDNOG00000047498	-	100	86.822	Dasypus_novemcinctus
ENSCLAG00000005169	RNPC3	99	85.078	ENSDORG00000027343	Rnpc3	99	85.078	Dipodomys_ordii
ENSCLAG00000005169	RNPC3	95	48.047	ENSEBUG00000002068	rnpc3	97	47.162	Eptatretus_burgeri
ENSCLAG00000005169	RNPC3	100	86.680	ENSEASG00005015957	RNPC3	100	86.680	Equus_asinus_asinus
ENSCLAG00000005169	RNPC3	100	87.259	ENSECAG00000021148	RNPC3	100	87.259	Equus_caballus
ENSCLAG00000005169	RNPC3	95	53.282	ENSELUG00000002264	rnpc3	97	53.668	Esox_lucius
ENSCLAG00000005169	RNPC3	100	87.427	ENSFCAG00000024312	RNPC3	100	88.781	Felis_catus
ENSCLAG00000005169	RNPC3	87	70.264	ENSFALG00000002580	RNPC3	99	70.813	Ficedula_albicollis
ENSCLAG00000005169	RNPC3	99	90.698	ENSFDAG00000019948	RNPC3	100	90.698	Fukomys_damarensis
ENSCLAG00000005169	RNPC3	95	49.602	ENSFHEG00000020647	rnpc3	98	48.743	Fundulus_heteroclitus
ENSCLAG00000005169	RNPC3	95	53.955	ENSGMOG00000019213	rnpc3	95	51.703	Gadus_morhua
ENSCLAG00000005169	RNPC3	95	71.111	ENSGALG00000005162	RNPC3	89	69.697	Gallus_gallus
ENSCLAG00000005169	RNPC3	95	51.308	ENSGAFG00000017236	rnpc3	96	50.586	Gambusia_affinis
ENSCLAG00000005169	RNPC3	95	53.579	ENSGACG00000002048	rnpc3	96	53.678	Gasterosteus_aculeatus
ENSCLAG00000005169	RNPC3	95	69.416	ENSGAGG00000008438	RNPC3	96	68.701	Gopherus_agassizii
ENSCLAG00000005169	RNPC3	98	73.084	ENSGGOG00000026201	-	98	74.067	Gorilla_gorilla
ENSCLAG00000005169	RNPC3	78	76.316	ENSHBUG00000015966	rnpc3	82	76.316	Haplochromis_burtoni
ENSCLAG00000005169	RNPC3	100	89.749	ENSHGLG00000001708	RNPC3	100	89.749	Heterocephalus_glaber_female
ENSCLAG00000005169	RNPC3	100	89.749	ENSHGLG00100003005	RNPC3	100	89.749	Heterocephalus_glaber_male
ENSCLAG00000005169	RNPC3	95	51.786	ENSHCOG00000017135	rnpc3	97	49.904	Hippocampus_comes
ENSCLAG00000005169	RNPC3	95	56.024	ENSIPUG00000002916	rnpc3	97	54.781	Ictalurus_punctatus
ENSCLAG00000005169	RNPC3	100	89.749	ENSSTOG00000025020	RNPC3	100	87.814	Ictidomys_tridecemlineatus
ENSCLAG00000005169	RNPC3	99	84.496	ENSJJAG00000010203	Rnpc3	100	84.109	Jaculus_jaculus
ENSCLAG00000005169	RNPC3	95	53.347	ENSKMAG00000017358	rnpc3	97	52.988	Kryptolebias_marmoratus
ENSCLAG00000005169	RNPC3	95	53.521	ENSLBEG00000024901	rnpc3	95	52.539	Labrus_bergylta
ENSCLAG00000005169	RNPC3	95	61.224	ENSLACG00000005720	RNPC3	90	61.633	Latimeria_chalumnae
ENSCLAG00000005169	RNPC3	95	59.100	ENSLOCG00000007986	rnpc3	96	59.100	Lepisosteus_oculatus
ENSCLAG00000005169	RNPC3	99	87.403	ENSLAFG00000032342	RNPC3	100	84.690	Loxodonta_africana
ENSCLAG00000005169	RNPC3	99	64.922	ENSMFAG00000002917	-	100	64.479	Macaca_fascicularis
ENSCLAG00000005169	RNPC3	99	86.408	ENSMFAG00000002004	RNPC3	99	86.408	Macaca_fascicularis
ENSCLAG00000005169	RNPC3	83	82.326	ENSMMUG00000002098	-	95	79.911	Macaca_mulatta
ENSCLAG00000005169	RNPC3	99	86.408	ENSMMUG00000018039	RNPC3	99	86.408	Macaca_mulatta
ENSCLAG00000005169	RNPC3	99	81.553	ENSMNEG00000033950	RNPC3	99	81.553	Macaca_nemestrina
ENSCLAG00000005169	RNPC3	99	62.500	ENSMNEG00000029209	-	99	63.230	Macaca_nemestrina
ENSCLAG00000005169	RNPC3	99	86.602	ENSMLEG00000033628	RNPC3	99	86.602	Mandrillus_leucophaeus
ENSCLAG00000005169	RNPC3	98	65.949	ENSMLEG00000034644	-	98	67.123	Mandrillus_leucophaeus
ENSCLAG00000005169	RNPC3	95	51.400	ENSMAMG00000007496	rnpc3	97	49.805	Mastacembelus_armatus
ENSCLAG00000005169	RNPC3	95	52.183	ENSMZEG00005020233	rnpc3	97	51.252	Maylandia_zebra
ENSCLAG00000005169	RNPC3	87	70.330	ENSMGAG00000006381	RNPC3	99	69.451	Meleagris_gallopavo
ENSCLAG00000005169	RNPC3	97	89.157	ENSMAUG00000001358	Rnpc3	100	87.573	Mesocricetus_auratus
ENSCLAG00000005169	RNPC3	99	87.597	ENSMICG00000029591	RNPC3	99	87.597	Microcebus_murinus
ENSCLAG00000005169	RNPC3	97	88.978	ENSMOCG00000013423	Rnpc3	100	87.041	Microtus_ochrogaster
ENSCLAG00000005169	RNPC3	95	50.100	ENSMMOG00000005309	rnpc3	97	49.703	Mola_mola
ENSCLAG00000005169	RNPC3	99	73.837	ENSMODG00000002946	RNPC3	99	75.388	Monodelphis_domestica
ENSCLAG00000005169	RNPC3	95	52.200	ENSMALG00000015471	rnpc3	97	52.000	Monopterus_albus
ENSCLAG00000005169	RNPC3	99	86.796	MGP_CAROLIEiJ_G0025555	Rnpc3	100	86.417	Mus_caroli
ENSCLAG00000005169	RNPC3	99	84.078	ENSMUSG00000027981	Rnpc3	100	84.078	Mus_musculus
ENSCLAG00000005169	RNPC3	99	83.883	MGP_PahariEiJ_G0027001	Rnpc3	100	84.449	Mus_pahari
ENSCLAG00000005169	RNPC3	99	86.408	MGP_SPRETEiJ_G0026505	Rnpc3	100	84.252	Mus_spretus
ENSCLAG00000005169	RNPC3	100	87.234	ENSMPUG00000007349	RNPC3	100	88.008	Mustela_putorius_furo
ENSCLAG00000005169	RNPC3	100	83.946	ENSMLUG00000028743	RNPC3	100	83.946	Myotis_lucifugus
ENSCLAG00000005169	RNPC3	99	86.187	ENSNGAG00000010939	Rnpc3	99	86.187	Nannospalax_galili
ENSCLAG00000005169	RNPC3	95	52.227	ENSNBRG00000012196	rnpc3	93	51.277	Neolamprologus_brichardi
ENSCLAG00000005169	RNPC3	100	88.372	ENSNLEG00000012013	RNPC3	100	88.953	Nomascus_leucogenys
ENSCLAG00000005169	RNPC3	100	91.473	ENSODEG00000007612	RNPC3	100	91.085	Octodon_degus
ENSCLAG00000005169	RNPC3	95	54.251	ENSONIG00000004770	rnpc3	99	52.259	Oreochromis_niloticus
ENSCLAG00000005169	RNPC3	90	76.344	ENSOANG00000008220	RNPC3	99	76.559	Ornithorhynchus_anatinus
ENSCLAG00000005169	RNPC3	100	88.395	ENSOCUG00000004016	RNPC3	100	86.460	Oryctolagus_cuniculus
ENSCLAG00000005169	RNPC3	95	54.545	ENSORLG00000005694	rnpc3	97	53.629	Oryzias_latipes
ENSCLAG00000005169	RNPC3	95	54.545	ENSORLG00020005513	rnpc3	97	53.737	Oryzias_latipes_hni
ENSCLAG00000005169	RNPC3	95	54.343	ENSORLG00015002179	rnpc3	97	53.939	Oryzias_latipes_hsok
ENSCLAG00000005169	RNPC3	95	52.121	ENSOMEG00000017737	rnpc3	97	54.435	Oryzias_melastigma
ENSCLAG00000005169	RNPC3	100	87.041	ENSOGAG00000026182	RNPC3	100	87.041	Otolemur_garnettii
ENSCLAG00000005169	RNPC3	100	87.814	ENSOARG00000018719	RNPC3	100	86.654	Ovis_aries
ENSCLAG00000005169	RNPC3	100	88.031	ENSPPAG00000037459	RNPC3	100	88.610	Pan_paniscus
ENSCLAG00000005169	RNPC3	100	72.727	ENSPPAG00000030278	-	100	74.081	Pan_paniscus
ENSCLAG00000005169	RNPC3	100	87.621	ENSPPRG00000020246	RNPC3	100	88.975	Panthera_pardus
ENSCLAG00000005169	RNPC3	98	87.968	ENSPTIG00000009887	RNPC3	100	89.349	Panthera_tigris_altaica
ENSCLAG00000005169	RNPC3	100	86.847	ENSPTRG00000033902	RNPC3	100	86.847	Pan_troglodytes
ENSCLAG00000005169	RNPC3	100	72.534	ENSPTRG00000044227	-	100	73.694	Pan_troglodytes
ENSCLAG00000005169	RNPC3	98	70.866	ENSPANG00000029957	-	99	70.217	Papio_anubis
ENSCLAG00000005169	RNPC3	99	88.132	ENSPANG00000012137	RNPC3	99	88.716	Papio_anubis
ENSCLAG00000005169	RNPC3	95	52.684	ENSPKIG00000008828	rnpc3	95	53.768	Paramormyrops_kingsleyae
ENSCLAG00000005169	RNPC3	63	67.470	ENSPSIG00000007396	RNPC3	99	66.867	Pelodiscus_sinensis
ENSCLAG00000005169	RNPC3	93	50.612	ENSPMGG00000011742	rnpc3	95	50.205	Periophthalmus_magnuspinnatus
ENSCLAG00000005169	RNPC3	88	87.719	ENSPEMG00000020112	Rnpc3	100	87.361	Peromyscus_maniculatus_bairdii
ENSCLAG00000005169	RNPC3	96	43.786	ENSPMAG00000003778	rnpc3	98	43.810	Petromyzon_marinus
ENSCLAG00000005169	RNPC3	99	74.612	ENSPCIG00000004415	-	99	75.581	Phascolarctos_cinereus
ENSCLAG00000005169	RNPC3	95	51.503	ENSPFOG00000009895	rnpc3	97	50.973	Poecilia_formosa
ENSCLAG00000005169	RNPC3	96	50.891	ENSPLAG00000012023	rnpc3	97	50.581	Poecilia_latipinna
ENSCLAG00000005169	RNPC3	98	50.677	ENSPMEG00000003663	rnpc3	97	51.167	Poecilia_mexicana
ENSCLAG00000005169	RNPC3	96	50.895	ENSPREG00000010206	rnpc3	97	50.680	Poecilia_reticulata
ENSCLAG00000005169	RNPC3	84	82.258	ENSPPYG00000001102	RNPC3	99	82.258	Pongo_abelii
ENSCLAG00000005169	RNPC3	95	52.227	ENSPNYG00000020603	rnpc3	96	51.277	Pundamilia_nyererei
ENSCLAG00000005169	RNPC3	95	53.968	ENSPNAG00000000524	rnpc3	76	63.084	Pygocentrus_nattereri
ENSCLAG00000005169	RNPC3	99	85.825	ENSRNOG00000017310	Rnpc3	100	84.854	Rattus_norvegicus
ENSCLAG00000005169	RNPC3	99	82.558	ENSRBIG00000043897	RNPC3	99	83.140	Rhinopithecus_bieti
ENSCLAG00000005169	RNPC3	99	86.990	ENSRROG00000032334	RNPC3	99	86.990	Rhinopithecus_roxellana
ENSCLAG00000005169	RNPC3	100	87.209	ENSSBOG00000024473	RNPC3	100	87.984	Saimiri_boliviensis_boliviensis
ENSCLAG00000005169	RNPC3	99	73.643	ENSSHAG00000011859	RNPC3	99	75.000	Sarcophilus_harrisii
ENSCLAG00000005169	RNPC3	96	57.564	ENSSFOG00015013055	rnpc3	99	57.564	Scleropages_formosus
ENSCLAG00000005169	RNPC3	95	51.800	ENSSMAG00000020346	rnpc3	97	50.000	Scophthalmus_maximus
ENSCLAG00000005169	RNPC3	95	53.785	ENSSDUG00000006600	rnpc3	96	52.519	Seriola_dumerili
ENSCLAG00000005169	RNPC3	95	53.984	ENSSLDG00000007979	rnpc3	96	52.519	Seriola_lalandi_dorsalis
ENSCLAG00000005169	RNPC3	96	64.529	ENSSPUG00000003872	-	92	65.051	Sphenodon_punctatus
ENSCLAG00000005169	RNPC3	95	69.636	ENSSPUG00000008539	-	94	69.777	Sphenodon_punctatus
ENSCLAG00000005169	RNPC3	95	53.971	ENSSPAG00000005633	rnpc3	97	53.600	Stegastes_partitus
ENSCLAG00000005169	RNPC3	100	89.126	ENSSSCG00000037254	RNPC3	100	87.767	Sus_scrofa
ENSCLAG00000005169	RNPC3	87	69.604	ENSTGUG00000004795	-	99	68.722	Taeniopygia_guttata
ENSCLAG00000005169	RNPC3	95	53.280	ENSTNIG00000018963	rnpc3	97	53.106	Tetraodon_nigroviridis
ENSCLAG00000005169	RNPC3	98	87.008	ENSUMAG00000007775	RNPC3	100	87.008	Ursus_maritimus
ENSCLAG00000005169	RNPC3	100	86.680	ENSVVUG00000000331	RNPC3	100	86.680	Vulpes_vulpes
ENSCLAG00000005169	RNPC3	98	49.231	ENSXETG00000025027	rnpc3	99	49.515	Xenopus_tropicalis
ENSCLAG00000005169	RNPC3	51	51.711	ENSXCOG00000005013	rnpc3	97	50.781	Xiphophorus_couchianus
ENSCLAG00000005169	RNPC3	96	50.696	ENSXMAG00000006495	rnpc3	97	50.388	Xiphophorus_maculatus