EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000005185 (Gene tree)
Gene ID: 102014137
Gene Symbol: -
Alias: -
Full Name: replication protein A1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 55332 bases
Position: chrJH721941.1:1306400-1361731
Accession: 102014137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007374	tRNA_anti-codon	PF01336.25	2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007491	-	1845	XM_005402602	ENSCLAP00000007374	615 (aa)	XP_005402659	-

Gene Model

Click here to download ENSCLAG00000005185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005185's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000005185	-	100	93.984	ENSCLAG00000015045	-	99	93.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005185	-	97	59.336	ENSAPOG00000019409	RPA1	97	59.336	Acanthochromis_polyacanthus
ENSCLAG00000005185	-	99	61.765	ENSAPOG00000011658	rpa1	99	62.241	Acanthochromis_polyacanthus
ENSCLAG00000005185	-	99	87.479	ENSAMEG00000007706	RPA1	98	87.479	Ailuropoda_melanoleuca
ENSCLAG00000005185	-	96	57.458	ENSACIG00000007277	rpa1	99	57.458	Amphilophus_citrinellus
ENSCLAG00000005185	-	95	58.992	ENSACIG00000012881	RPA1	99	58.992	Amphilophus_citrinellus
ENSCLAG00000005185	-	99	63.235	ENSAOCG00000023376	rpa1	99	63.385	Amphiprion_ocellaris
ENSCLAG00000005185	-	99	54.378	ENSAOCG00000009003	RPA1	99	54.224	Amphiprion_ocellaris
ENSCLAG00000005185	-	99	63.072	ENSAPEG00000008634	rpa1	99	63.212	Amphiprion_percula
ENSCLAG00000005185	-	99	52.402	ENSAPEG00000019132	RPA1	99	53.303	Amphiprion_percula
ENSCLAG00000005185	-	99	54.977	ENSATEG00000006443	RPA1	99	54.977	Anabas_testudineus
ENSCLAG00000005185	-	95	64.151	ENSATEG00000022024	rpa1	99	64.151	Anabas_testudineus
ENSCLAG00000005185	-	98	65.288	ENSAPLG00000012442	RPA1	100	65.288	Anas_platyrhynchos
ENSCLAG00000005185	-	99	62.520	ENSACAG00000014490	RPA1	99	62.682	Anolis_carolinensis
ENSCLAG00000005185	-	98	89.018	ENSANAG00000023456	RPA1	99	89.018	Aotus_nancymaae
ENSCLAG00000005185	-	93	63.304	ENSACLG00000006640	rpa1	99	63.304	Astatotilapia_calliptera
ENSCLAG00000005185	-	99	56.899	ENSACLG00000005223	RPA1	99	56.899	Astatotilapia_calliptera
ENSCLAG00000005185	-	100	60.650	ENSAMXG00000008418	rpa1	99	61.301	Astyanax_mexicanus
ENSCLAG00000005185	-	100	88.455	ENSBTAG00000009711	RPA1	99	88.455	Bos_taurus
ENSCLAG00000005185	-	99	88.599	ENSCJAG00000001848	RPA1	99	88.599	Callithrix_jacchus
ENSCLAG00000005185	-	99	88.274	ENSCAFG00000019249	RPA1	99	88.274	Canis_familiaris
ENSCLAG00000005185	-	99	88.274	ENSCAFG00020009847	RPA1	99	88.274	Canis_lupus_dingo
ENSCLAG00000005185	-	100	88.455	ENSCHIG00000026308	RPA1	99	88.455	Capra_hircus
ENSCLAG00000005185	-	99	89.268	ENSTSYG00000003482	-	99	89.268	Carlito_syrichta
ENSCLAG00000005185	-	100	94.472	ENSCPOG00000000035	RPA1	99	94.472	Cavia_porcellus
ENSCLAG00000005185	-	99	78.606	ENSCCAG00000010981	RPA1	99	78.606	Cebus_capucinus
ENSCLAG00000005185	-	99	77.634	ENSCSAG00000013833	RPA1	99	78.155	Chlorocebus_sabaeus
ENSCLAG00000005185	-	71	91.762	ENSCHOG00000009454	-	99	91.762	Choloepus_hoffmanni
ENSCLAG00000005185	-	95	85.495	ENSCHOG00000013540	-	99	85.495	Choloepus_hoffmanni
ENSCLAG00000005185	-	99	77.199	ENSCPBG00000020377	RPA1	99	77.680	Chrysemys_picta_bellii
ENSCLAG00000005185	-	99	42.062	ENSCING00000023482	-	98	42.062	Ciona_intestinalis
ENSCLAG00000005185	-	98	86.070	ENSCANG00000030911	RPA1	99	86.070	Colobus_angolensis_palliatus
ENSCLAG00000005185	-	99	88.026	ENSCGRG00001008197	Rpa1	99	88.026	Cricetulus_griseus_chok1gshd
ENSCLAG00000005185	-	82	87.968	ENSCGRG00000000582	Rpa1	99	87.968	Cricetulus_griseus_crigri
ENSCLAG00000005185	-	99	59.543	ENSCSEG00000013066	rpa1	99	59.543	Cynoglossus_semilaevis
ENSCLAG00000005185	-	99	51.659	ENSCSEG00000012726	RPA1	98	53.767	Cynoglossus_semilaevis
ENSCLAG00000005185	-	96	53.610	ENSCVAG00000013446	-	96	53.610	Cyprinodon_variegatus
ENSCLAG00000005185	-	99	63.054	ENSCVAG00000019431	rpa1	99	64.510	Cyprinodon_variegatus
ENSCLAG00000005185	-	100	63.149	ENSDARG00000003938	rpa1	99	63.149	Danio_rerio
ENSCLAG00000005185	-	99	87.954	ENSDNOG00000017218	RPA1	98	87.954	Dasypus_novemcinctus
ENSCLAG00000005185	-	99	90.228	ENSDORG00000006199	Rpa1	99	90.228	Dipodomys_ordii
ENSCLAG00000005185	-	99	41.961	FBgn0010173	RpA-70	98	42.834	Drosophila_melanogaster
ENSCLAG00000005185	-	83	86.598	ENSETEG00000017608	RPA1	82	86.598	Echinops_telfairi
ENSCLAG00000005185	-	98	89.203	ENSEASG00005009372	RPA1	97	89.203	Equus_asinus_asinus
ENSCLAG00000005185	-	99	89.088	ENSECAG00000023886	RPA1	99	89.088	Equus_caballus
ENSCLAG00000005185	-	68	90.215	ENSEEUG00000002186	-	68	90.215	Erinaceus_europaeus
ENSCLAG00000005185	-	88	56.697	ENSELUG00000006136	RPA1	99	56.697	Esox_lucius
ENSCLAG00000005185	-	100	61.389	ENSELUG00000021071	rpa1	99	61.650	Esox_lucius
ENSCLAG00000005185	-	99	87.154	ENSFCAG00000006306	RPA1	99	87.154	Felis_catus
ENSCLAG00000005185	-	99	74.716	ENSFALG00000006575	RPA1	99	74.716	Ficedula_albicollis
ENSCLAG00000005185	-	99	95.114	ENSFDAG00000007720	RPA1	99	95.114	Fukomys_damarensis
ENSCLAG00000005185	-	99	61.513	ENSFHEG00000003580	rpa1	99	61.513	Fundulus_heteroclitus
ENSCLAG00000005185	-	99	58.429	ENSGMOG00000010382	rpa1	99	58.429	Gadus_morhua
ENSCLAG00000005185	-	99	74.797	ENSGALG00000003072	RPA1	99	74.797	Gallus_gallus
ENSCLAG00000005185	-	99	55.319	ENSGAFG00000020953	RPA1	99	55.455	Gambusia_affinis
ENSCLAG00000005185	-	99	61.944	ENSGAFG00000012916	rpa1	99	61.944	Gambusia_affinis
ENSCLAG00000005185	-	99	59.869	ENSGACG00000010856	rpa1	99	59.869	Gasterosteus_aculeatus
ENSCLAG00000005185	-	99	77.199	ENSGAGG00000013611	RPA1	99	77.199	Gopherus_agassizii
ENSCLAG00000005185	-	99	86.808	ENSGGOG00000014186	RPA1	99	86.808	Gorilla_gorilla
ENSCLAG00000005185	-	99	62.927	ENSHBUG00000017773	rpa1	99	62.927	Haplochromis_burtoni
ENSCLAG00000005185	-	96	52.421	ENSHBUG00000009348	RPA1	99	52.421	Haplochromis_burtoni
ENSCLAG00000005185	-	99	94.951	ENSHGLG00000008846	RPA1	100	94.951	Heterocephalus_glaber_female
ENSCLAG00000005185	-	99	94.951	ENSHGLG00100017755	-	100	94.951	Heterocephalus_glaber_male
ENSCLAG00000005185	-	99	89.251	ENSHGLG00100000799	-	99	89.251	Heterocephalus_glaber_male
ENSCLAG00000005185	-	99	80.782	ENSHGLG00100002005	-	99	80.782	Heterocephalus_glaber_male
ENSCLAG00000005185	-	99	61.489	ENSHCOG00000001401	rpa1	99	61.827	Hippocampus_comes
ENSCLAG00000005185	-	99	44.212	ENSHCOG00000000351	RPA1	99	44.212	Hippocampus_comes
ENSCLAG00000005185	-	100	61.974	ENSIPUG00000004400	rpa1	99	61.974	Ictalurus_punctatus
ENSCLAG00000005185	-	98	83.059	ENSSTOG00000022475	RPA1	98	83.059	Ictidomys_tridecemlineatus
ENSCLAG00000005185	-	95	91.993	ENSJJAG00000000876	Rpa1	98	91.993	Jaculus_jaculus
ENSCLAG00000005185	-	99	61.175	ENSKMAG00000005605	rpa1	99	61.664	Kryptolebias_marmoratus
ENSCLAG00000005185	-	99	54.943	ENSKMAG00000000234	RPA1	99	54.943	Kryptolebias_marmoratus
ENSCLAG00000005185	-	97	64.920	ENSLBEG00000002281	RPA1	85	64.920	Labrus_bergylta
ENSCLAG00000005185	-	99	61.664	ENSLBEG00000021604	rpa1	99	61.664	Labrus_bergylta
ENSCLAG00000005185	-	81	66.135	ENSLACG00000007210	RPA1	99	66.135	Latimeria_chalumnae
ENSCLAG00000005185	-	99	66.124	ENSLOCG00000006397	rpa1	99	66.124	Lepisosteus_oculatus
ENSCLAG00000005185	-	99	85.714	ENSLAFG00000015354	RPA1	99	85.714	Loxodonta_africana
ENSCLAG00000005185	-	82	89.328	ENSMFAG00000036138	-	100	89.941	Macaca_fascicularis
ENSCLAG00000005185	-	99	82.114	ENSMMUG00000002442	-	99	82.114	Macaca_mulatta
ENSCLAG00000005185	-	98	89.221	ENSMMUG00000011604	-	99	89.735	Macaca_mulatta
ENSCLAG00000005185	-	99	85.831	ENSMNEG00000031632	-	99	86.341	Macaca_nemestrina
ENSCLAG00000005185	-	88	85.350	ENSMNEG00000029837	-	99	85.350	Macaca_nemestrina
ENSCLAG00000005185	-	98	82.947	ENSMLEG00000038768	-	99	83.471	Mandrillus_leucophaeus
ENSCLAG00000005185	-	99	62.643	ENSMAMG00000017993	rpa1	99	62.643	Mastacembelus_armatus
ENSCLAG00000005185	-	99	53.709	ENSMAMG00000020097	RPA1	99	53.550	Mastacembelus_armatus
ENSCLAG00000005185	-	99	56.899	ENSMZEG00005024731	RPA1	99	56.899	Maylandia_zebra
ENSCLAG00000005185	-	99	62.927	ENSMZEG00005007551	rpa1	99	62.927	Maylandia_zebra
ENSCLAG00000005185	-	99	74.671	ENSMGAG00000005315	RPA1	98	74.671	Meleagris_gallopavo
ENSCLAG00000005185	-	98	89.000	ENSMAUG00000010474	Rpa1	99	89.000	Mesocricetus_auratus
ENSCLAG00000005185	-	99	88.762	ENSMICG00000012867	RPA1	99	88.762	Microcebus_murinus
ENSCLAG00000005185	-	99	87.765	ENSMOCG00000013019	Rpa1	99	87.765	Microtus_ochrogaster
ENSCLAG00000005185	-	99	60.848	ENSMMOG00000014292	rpa1	99	62.057	Mola_mola
ENSCLAG00000005185	-	96	60.793	ENSMMOG00000010868	RPA1	97	60.793	Mola_mola
ENSCLAG00000005185	-	100	82.927	ENSMODG00000010549	RPA1	99	82.927	Monodelphis_domestica
ENSCLAG00000005185	-	99	62.890	ENSMALG00000011453	rpa1	99	63.054	Monopterus_albus
ENSCLAG00000005185	-	91	62.415	ENSMALG00000001208	RPA1	77	62.415	Monopterus_albus
ENSCLAG00000005185	-	99	87.175	MGP_CAROLIEiJ_G0016734	Rpa1	99	87.175	Mus_caroli
ENSCLAG00000005185	-	99	85.209	ENSMUSG00000000751	Rpa1	99	85.209	Mus_musculus
ENSCLAG00000005185	-	99	88.207	MGP_PahariEiJ_G0017871	Rpa1	99	88.207	Mus_pahari
ENSCLAG00000005185	-	99	85.233	MGP_SPRETEiJ_G0017577	Rpa1	99	85.233	Mus_spretus
ENSCLAG00000005185	-	99	86.156	ENSMPUG00000013119	RPA1	99	86.156	Mustela_putorius_furo
ENSCLAG00000005185	-	100	85.484	ENSMLUG00000006113	RPA1	99	85.484	Myotis_lucifugus
ENSCLAG00000005185	-	95	88.245	ENSNGAG00000004522	Rpa1	94	88.245	Nannospalax_galili
ENSCLAG00000005185	-	96	55.818	ENSNBRG00000009672	RPA1	95	55.818	Neolamprologus_brichardi
ENSCLAG00000005185	-	94	63.103	ENSNBRG00000020595	rpa1	99	63.103	Neolamprologus_brichardi
ENSCLAG00000005185	-	99	88.599	ENSNLEG00000017149	RPA1	99	89.106	Nomascus_leucogenys
ENSCLAG00000005185	-	98	72.471	ENSMEUG00000006714	RPA1	99	72.471	Notamacropus_eugenii
ENSCLAG00000005185	-	95	94.295	ENSODEG00000009038	RPA1	96	94.295	Octodon_degus
ENSCLAG00000005185	-	99	62.843	ENSONIG00000013135	rpa1	99	62.843	Oreochromis_niloticus
ENSCLAG00000005185	-	98	82.421	ENSOANG00000010880	RPA1	99	82.587	Ornithorhynchus_anatinus
ENSCLAG00000005185	-	100	84.341	ENSOCUG00000001504	RPA1	99	84.341	Oryctolagus_cuniculus
ENSCLAG00000005185	-	99	62.357	ENSORLG00000004856	rpa1	99	62.357	Oryzias_latipes
ENSCLAG00000005185	-	99	54.338	ENSORLG00000003368	RPA1	99	54.338	Oryzias_latipes
ENSCLAG00000005185	-	99	53.363	ENSORLG00020015284	RPA1	99	53.363	Oryzias_latipes_hni
ENSCLAG00000005185	-	99	62.520	ENSORLG00020008980	rpa1	99	62.520	Oryzias_latipes_hni
ENSCLAG00000005185	-	71	61.379	ENSORLG00015005867	-	98	61.379	Oryzias_latipes_hsok
ENSCLAG00000005185	-	99	54.884	ENSORLG00015020383	RPA1	99	54.884	Oryzias_latipes_hsok
ENSCLAG00000005185	-	99	62.520	ENSORLG00015013982	rpa1	99	62.520	Oryzias_latipes_hsok
ENSCLAG00000005185	-	99	60.131	ENSOMEG00000004704	rpa1	99	60.131	Oryzias_melastigma
ENSCLAG00000005185	-	95	57.436	ENSOMEG00000011040	RPA1	99	57.436	Oryzias_melastigma
ENSCLAG00000005185	-	94	85.263	ENSOGAG00000029379	-	99	85.263	Otolemur_garnettii
ENSCLAG00000005185	-	99	89.902	ENSOGAG00000005581	-	99	89.902	Otolemur_garnettii
ENSCLAG00000005185	-	100	88.455	ENSOARG00000014479	RPA1	99	88.455	Ovis_aries
ENSCLAG00000005185	-	99	89.251	ENSPPAG00000039680	RPA1	99	89.756	Pan_paniscus
ENSCLAG00000005185	-	99	86.667	ENSPPRG00000011807	RPA1	99	86.667	Panthera_pardus
ENSCLAG00000005185	-	99	86.667	ENSPTIG00000007898	RPA1	99	86.667	Panthera_tigris_altaica
ENSCLAG00000005185	-	99	89.577	ENSPTRG00000008539	RPA1	99	90.081	Pan_troglodytes
ENSCLAG00000005185	-	99	88.925	ENSPANG00000024592	RPA1	99	89.431	Papio_anubis
ENSCLAG00000005185	-	95	60.892	ENSPKIG00000008053	rpa1	94	61.063	Paramormyrops_kingsleyae
ENSCLAG00000005185	-	97	76.294	ENSPSIG00000015617	RPA1	99	76.294	Pelodiscus_sinensis
ENSCLAG00000005185	-	98	61.857	ENSPMGG00000011589	rpa1	99	62.023	Periophthalmus_magnuspinnatus
ENSCLAG00000005185	-	99	54.207	ENSPMGG00000000543	RPA1	99	56.614	Periophthalmus_magnuspinnatus
ENSCLAG00000005185	-	99	88.254	ENSPEMG00000021061	Rpa1	99	88.254	Peromyscus_maniculatus_bairdii
ENSCLAG00000005185	-	100	81.656	ENSPCIG00000019049	RPA1	99	82.143	Phascolarctos_cinereus
ENSCLAG00000005185	-	99	62.829	ENSPFOG00000003987	rpa1	99	62.829	Poecilia_formosa
ENSCLAG00000005185	-	95	54.428	ENSPLAG00000008844	-	97	54.428	Poecilia_latipinna
ENSCLAG00000005185	-	99	62.829	ENSPLAG00000004984	rpa1	99	62.829	Poecilia_latipinna
ENSCLAG00000005185	-	95	54.473	ENSPMEG00000003627	-	97	55.056	Poecilia_mexicana
ENSCLAG00000005185	-	99	62.829	ENSPMEG00000020602	rpa1	99	63.269	Poecilia_mexicana
ENSCLAG00000005185	-	99	53.176	ENSPREG00000010119	RPA1	100	52.632	Poecilia_reticulata
ENSCLAG00000005185	-	94	54.905	ENSPREG00000010174	rpa1	96	54.905	Poecilia_reticulata
ENSCLAG00000005185	-	99	89.414	ENSPCOG00000001799	RPA1	99	89.414	Propithecus_coquereli
ENSCLAG00000005185	-	99	89.088	ENSPVAG00000002149	RPA1	99	89.088	Pteropus_vampyrus
ENSCLAG00000005185	-	99	56.589	ENSPNYG00000024165	RPA1	99	56.589	Pundamilia_nyererei
ENSCLAG00000005185	-	99	63.089	ENSPNYG00000016316	rpa1	99	63.258	Pundamilia_nyererei
ENSCLAG00000005185	-	99	53.583	ENSPNAG00000008599	rpa1	96	55.842	Pygocentrus_nattereri
ENSCLAG00000005185	-	99	88.418	ENSRNOG00000003123	Rpa1	99	88.418	Rattus_norvegicus
ENSCLAG00000005185	-	99	88.943	ENSRBIG00000036587	RPA1	99	88.943	Rhinopithecus_bieti
ENSCLAG00000005185	-	99	83.740	ENSRROG00000043278	RPA1	99	83.740	Rhinopithecus_roxellana
ENSCLAG00000005185	-	97	31.967	YAR007C	RFA1	97	31.967	Saccharomyces_cerevisiae
ENSCLAG00000005185	-	98	85.548	ENSSBOG00000030233	RPA1	99	85.548	Saimiri_boliviensis_boliviensis
ENSCLAG00000005185	-	99	82.815	ENSSHAG00000007969	RPA1	98	83.142	Sarcophilus_harrisii
ENSCLAG00000005185	-	99	63.681	ENSSFOG00015005362	rpa1	92	63.681	Scleropages_formosus
ENSCLAG00000005185	-	99	53.394	ENSSMAG00000019746	RPA1	99	53.092	Scophthalmus_maximus
ENSCLAG00000005185	-	99	52.933	ENSSDUG00000016358	RPA1	99	53.372	Seriola_dumerili
ENSCLAG00000005185	-	99	63.458	ENSSDUG00000011949	rpa1	99	63.458	Seriola_dumerili
ENSCLAG00000005185	-	99	52.409	ENSSLDG00000020784	RPA1	99	53.139	Seriola_lalandi_dorsalis
ENSCLAG00000005185	-	99	63.785	ENSSLDG00000011806	rpa1	99	63.785	Seriola_lalandi_dorsalis
ENSCLAG00000005185	-	98	69.536	ENSSARG00000007506	RPA1	99	69.536	Sorex_araneus
ENSCLAG00000005185	-	97	72.651	ENSSPUG00000007223	RPA1	99	72.651	Sphenodon_punctatus
ENSCLAG00000005185	-	99	62.316	ENSSPAG00000009903	rpa1	99	62.316	Stegastes_partitus
ENSCLAG00000005185	-	99	56.543	ENSSPAG00000011165	RPA1	99	56.543	Stegastes_partitus
ENSCLAG00000005185	-	98	88.206	ENSSSCG00000017822	RPA1	99	88.206	Sus_scrofa
ENSCLAG00000005185	-	99	74.797	ENSTGUG00000005775	RPA1	99	74.797	Taeniopygia_guttata
ENSCLAG00000005185	-	99	56.084	ENSTRUG00000000405	RPA1	98	56.322	Takifugu_rubripes
ENSCLAG00000005185	-	99	63.816	ENSTRUG00000003616	rpa1	99	63.816	Takifugu_rubripes
ENSCLAG00000005185	-	99	64.390	ENSTNIG00000016199	rpa1	99	64.390	Tetraodon_nigroviridis
ENSCLAG00000005185	-	78	95.349	ENSTBEG00000002709	RPA1	81	95.349	Tupaia_belangeri
ENSCLAG00000005185	-	100	87.154	ENSTTRG00000001169	RPA1	99	87.154	Tursiops_truncatus
ENSCLAG00000005185	-	89	92.308	ENSUAMG00000015676	RPA1	97	92.308	Ursus_americanus
ENSCLAG00000005185	-	99	87.459	ENSUMAG00000009328	RPA1	99	87.459	Ursus_maritimus
ENSCLAG00000005185	-	100	86.829	ENSVPAG00000009443	RPA1	99	86.829	Vicugna_pacos
ENSCLAG00000005185	-	99	87.948	ENSVVUG00000021715	RPA1	99	87.948	Vulpes_vulpes
ENSCLAG00000005185	-	99	72.995	ENSXETG00000013538	rpa1	99	73.856	Xenopus_tropicalis
ENSCLAG00000005185	-	95	56.143	ENSXCOG00000009899	-	99	56.143	Xiphophorus_couchianus
ENSCLAG00000005185	-	93	59.756	ENSXCOG00000010068	rpa1	94	60.901	Xiphophorus_couchianus
ENSCLAG00000005185	-	99	65.297	ENSXMAG00000010333	RPA1	90	65.297	Xiphophorus_maculatus
ENSCLAG00000005185	-	99	61.349	ENSXMAG00000004102	rpa1	99	62.676	Xiphophorus_maculatus