EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005186 (Gene tree)
Gene ID: 102021249
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 21966 bases
Position: chrJH721881.1:10189469-10211434
Accession: 102021249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007376	PolyA_pol	PF01743.20	6.5e-34	1	1
ENSCLAP00000007375	PolyA_pol	PF01743.20	2.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007492	TRNT1-201	5004	XM_005383747	ENSCLAP00000007375	434 (aa)	XP_005383804	UPI00038EC6D4
ENSCLAT00000007493	TRNT1-202	642	-	ENSCLAP00000007376	214 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000005186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005186	TRNT1	99	92.841	ENSG00000072756	TRNT1	99	92.841	Homo_sapiens
ENSCLAG00000005186	TRNT1	92	73.980	ENSAPOG00000013687	trnt1	99	66.509	Acanthochromis_polyacanthus
ENSCLAG00000005186	TRNT1	99	90.805	ENSAMEG00000014520	TRNT1	99	90.805	Ailuropoda_melanoleuca
ENSCLAG00000005186	TRNT1	92	76.531	ENSACIG00000021706	trnt1	99	68.000	Amphilophus_citrinellus
ENSCLAG00000005186	TRNT1	92	75.000	ENSAOCG00000024612	trnt1	99	67.059	Amphiprion_ocellaris
ENSCLAG00000005186	TRNT1	96	60.432	ENSAPEG00000022627	trnt1	97	60.432	Amphiprion_percula
ENSCLAG00000005186	TRNT1	93	69.727	ENSATEG00000008928	trnt1	99	69.727	Anabas_testudineus
ENSCLAG00000005186	TRNT1	89	75.711	ENSAPLG00000004258	TRNT1	96	75.711	Anas_platyrhynchos
ENSCLAG00000005186	TRNT1	99	75.289	ENSACAG00000005657	TRNT1	99	75.289	Anolis_carolinensis
ENSCLAG00000005186	TRNT1	99	92.841	ENSANAG00000024802	TRNT1	99	92.841	Aotus_nancymaae
ENSCLAG00000005186	TRNT1	92	75.510	ENSACLG00000022227	trnt1	99	67.529	Astatotilapia_calliptera
ENSCLAG00000005186	TRNT1	98	66.359	ENSAMXG00000003960	trnt1	99	66.359	Astyanax_mexicanus
ENSCLAG00000005186	TRNT1	99	90.300	ENSBTAG00000019534	TRNT1	99	90.300	Bos_taurus
ENSCLAG00000005186	TRNT1	82	63.068	WBGene00010089	hpo-31	94	43.914	Caenorhabditis_elegans
ENSCLAG00000005186	TRNT1	99	92.379	ENSCJAG00000015466	TRNT1	99	92.379	Callithrix_jacchus
ENSCLAG00000005186	TRNT1	99	90.069	ENSCAFG00000005985	TRNT1	99	90.069	Canis_familiaris
ENSCLAG00000005186	TRNT1	99	90.069	ENSCAFG00020014746	TRNT1	99	90.069	Canis_lupus_dingo
ENSCLAG00000005186	TRNT1	99	90.300	ENSCHIG00000007030	TRNT1	99	90.300	Capra_hircus
ENSCLAG00000005186	TRNT1	99	92.841	ENSTSYG00000013390	TRNT1	99	92.841	Carlito_syrichta
ENSCLAG00000005186	TRNT1	87	76.455	ENSCAPG00000006891	TRNT1	100	76.455	Cavia_aperea
ENSCLAG00000005186	TRNT1	100	94.931	ENSCPOG00000007849	TRNT1	100	94.931	Cavia_porcellus
ENSCLAG00000005186	TRNT1	95	89.639	ENSCCAG00000002919	TRNT1	99	91.750	Cebus_capucinus
ENSCLAG00000005186	TRNT1	100	92.396	ENSCATG00000031985	TRNT1	99	92.396	Cercocebus_atys
ENSCLAG00000005186	TRNT1	99	92.841	ENSCSAG00000011052	TRNT1	99	92.841	Chlorocebus_sabaeus
ENSCLAG00000005186	TRNT1	94	91.089	ENSCHOG00000005712	TRNT1	85	91.089	Choloepus_hoffmanni
ENSCLAG00000005186	TRNT1	95	81.159	ENSCPBG00000017636	TRNT1	95	81.159	Chrysemys_picta_bellii
ENSCLAG00000005186	TRNT1	81	63.218	ENSCING00000007069	-	99	45.255	Ciona_intestinalis
ENSCLAG00000005186	TRNT1	90	59.896	ENSCSAVG00000007494	-	99	45.283	Ciona_savignyi
ENSCLAG00000005186	TRNT1	99	92.379	ENSCANG00000039030	TRNT1	99	92.379	Colobus_angolensis_palliatus
ENSCLAG00000005186	TRNT1	99	91.455	ENSCGRG00001009998	Trnt1	99	91.455	Cricetulus_griseus_chok1gshd
ENSCLAG00000005186	TRNT1	99	91.455	ENSCGRG00000013410	Trnt1	99	91.455	Cricetulus_griseus_crigri
ENSCLAG00000005186	TRNT1	92	74.490	ENSCSEG00000008157	trnt1	99	65.882	Cynoglossus_semilaevis
ENSCLAG00000005186	TRNT1	84	79.888	ENSCVAG00000019770	trnt1	96	68.873	Cyprinodon_variegatus
ENSCLAG00000005186	TRNT1	92	74.874	ENSDARG00000075297	trnt1	99	67.832	Danio_rerio
ENSCLAG00000005186	TRNT1	99	90.300	ENSDNOG00000008837	TRNT1	99	90.300	Dasypus_novemcinctus
ENSCLAG00000005186	TRNT1	99	90.069	ENSDORG00000014035	Trnt1	99	90.069	Dipodomys_ordii
ENSCLAG00000005186	TRNT1	81	66.667	FBgn0037369	CG2100	83	48.889	Drosophila_melanogaster
ENSCLAG00000005186	TRNT1	86	90.811	ENSETEG00000018177	TRNT1	100	88.755	Echinops_telfairi
ENSCLAG00000005186	TRNT1	93	62.035	ENSEBUG00000012779	-	95	62.035	Eptatretus_burgeri
ENSCLAG00000005186	TRNT1	99	92.148	ENSEASG00005003577	TRNT1	99	92.148	Equus_asinus_asinus
ENSCLAG00000005186	TRNT1	99	92.379	ENSECAG00000014420	TRNT1	99	92.379	Equus_caballus
ENSCLAG00000005186	TRNT1	99	88.222	ENSEEUG00000009567	TRNT1	99	88.222	Erinaceus_europaeus
ENSCLAG00000005186	TRNT1	98	67.523	ENSELUG00000003802	trnt1	99	67.523	Esox_lucius
ENSCLAG00000005186	TRNT1	99	90.300	ENSFCAG00000026805	TRNT1	99	90.300	Felis_catus
ENSCLAG00000005186	TRNT1	88	74.479	ENSFALG00000013539	TRNT1	99	74.479	Ficedula_albicollis
ENSCLAG00000005186	TRNT1	100	94.700	ENSFDAG00000018412	TRNT1	100	94.700	Fukomys_damarensis
ENSCLAG00000005186	TRNT1	84	81.006	ENSFHEG00000019294	trnt1	96	68.873	Fundulus_heteroclitus
ENSCLAG00000005186	TRNT1	84	78.771	ENSGMOG00000007460	trnt1	96	67.568	Gadus_morhua
ENSCLAG00000005186	TRNT1	98	70.930	ENSGALG00000017368	TRNT1	99	70.930	Gallus_gallus
ENSCLAG00000005186	TRNT1	84	79.330	ENSGAFG00000008647	trnt1	96	68.382	Gambusia_affinis
ENSCLAG00000005186	TRNT1	92	73.980	ENSGACG00000011903	trnt1	99	64.471	Gasterosteus_aculeatus
ENSCLAG00000005186	TRNT1	99	79.535	ENSGAGG00000020942	TRNT1	97	79.535	Gopherus_agassizii
ENSCLAG00000005186	TRNT1	99	93.072	ENSGGOG00000015286	TRNT1	99	93.072	Gorilla_gorilla
ENSCLAG00000005186	TRNT1	92	75.510	ENSHBUG00000002797	trnt1	99	67.529	Haplochromis_burtoni
ENSCLAG00000005186	TRNT1	100	94.931	ENSHGLG00000003649	TRNT1	100	94.931	Heterocephalus_glaber_female
ENSCLAG00000005186	TRNT1	100	88.736	ENSHGLG00000000221	-	100	88.736	Heterocephalus_glaber_female
ENSCLAG00000005186	TRNT1	100	93.779	ENSHGLG00100016421	TRNT1	100	93.779	Heterocephalus_glaber_male
ENSCLAG00000005186	TRNT1	92	75.000	ENSHCOG00000010618	trnt1	99	65.176	Hippocampus_comes
ENSCLAG00000005186	TRNT1	96	67.711	ENSIPUG00000000971	trnt1	96	67.711	Ictalurus_punctatus
ENSCLAG00000005186	TRNT1	97	91.787	ENSSTOG00000000150	TRNT1	100	91.787	Ictidomys_tridecemlineatus
ENSCLAG00000005186	TRNT1	99	91.455	ENSJJAG00000018561	Trnt1	99	91.455	Jaculus_jaculus
ENSCLAG00000005186	TRNT1	92	76.142	ENSKMAG00000011307	trnt1	99	67.606	Kryptolebias_marmoratus
ENSCLAG00000005186	TRNT1	92	73.980	ENSLBEG00000019457	trnt1	97	62.683	Labrus_bergylta
ENSCLAG00000005186	TRNT1	95	78.325	ENSLACG00000013227	TRNT1	99	72.517	Latimeria_chalumnae
ENSCLAG00000005186	TRNT1	98	69.930	ENSLOCG00000011105	trnt1	98	69.930	Lepisosteus_oculatus
ENSCLAG00000005186	TRNT1	99	92.379	ENSLAFG00000023191	TRNT1	99	92.379	Loxodonta_africana
ENSCLAG00000005186	TRNT1	100	92.627	ENSMFAG00000045113	TRNT1	99	92.627	Macaca_fascicularis
ENSCLAG00000005186	TRNT1	100	92.627	ENSMMUG00000017983	TRNT1	99	92.627	Macaca_mulatta
ENSCLAG00000005186	TRNT1	100	92.627	ENSMNEG00000037805	TRNT1	99	92.627	Macaca_nemestrina
ENSCLAG00000005186	TRNT1	88	94.241	ENSMLEG00000033671	TRNT1	99	94.241	Mandrillus_leucophaeus
ENSCLAG00000005186	TRNT1	92	76.531	ENSMAMG00000023401	trnt1	99	67.294	Mastacembelus_armatus
ENSCLAG00000005186	TRNT1	92	75.510	ENSMZEG00005009141	trnt1	99	67.529	Maylandia_zebra
ENSCLAG00000005186	TRNT1	74	74.062	ENSMGAG00000009971	TRNT1	99	74.062	Meleagris_gallopavo
ENSCLAG00000005186	TRNT1	99	91.686	ENSMAUG00000020707	Trnt1	99	91.686	Mesocricetus_auratus
ENSCLAG00000005186	TRNT1	99	92.610	ENSMICG00000016615	TRNT1	99	92.610	Microcebus_murinus
ENSCLAG00000005186	TRNT1	99	90.993	ENSMOCG00000004539	Trnt1	99	90.993	Microtus_ochrogaster
ENSCLAG00000005186	TRNT1	92	75.000	ENSMMOG00000010742	trnt1	99	66.588	Mola_mola
ENSCLAG00000005186	TRNT1	99	85.219	ENSMODG00000004368	TRNT1	99	85.219	Monodelphis_domestica
ENSCLAG00000005186	TRNT1	92	74.490	ENSMALG00000008376	trnt1	99	65.882	Monopterus_albus
ENSCLAG00000005186	TRNT1	99	92.541	MGP_CAROLIEiJ_G0028698	Trnt1	99	92.541	Mus_caroli
ENSCLAG00000005186	TRNT1	99	92.541	ENSMUSG00000013736	Trnt1	99	92.541	Mus_musculus
ENSCLAG00000005186	TRNT1	99	91.917	MGP_PahariEiJ_G0022449	Trnt1	100	93.103	Mus_pahari
ENSCLAG00000005186	TRNT1	99	92.541	MGP_SPRETEiJ_G0029726	Trnt1	99	92.541	Mus_spretus
ENSCLAG00000005186	TRNT1	99	91.686	ENSMPUG00000017017	TRNT1	99	91.686	Mustela_putorius_furo
ENSCLAG00000005186	TRNT1	89	87.532	ENSMLUG00000011864	TRNT1	99	87.532	Myotis_lucifugus
ENSCLAG00000005186	TRNT1	99	91.224	ENSNGAG00000000537	Trnt1	99	91.224	Nannospalax_galili
ENSCLAG00000005186	TRNT1	92	75.510	ENSNBRG00000023606	trnt1	99	67.246	Neolamprologus_brichardi
ENSCLAG00000005186	TRNT1	99	93.303	ENSNLEG00000003226	TRNT1	99	93.303	Nomascus_leucogenys
ENSCLAG00000005186	TRNT1	99	83.834	ENSMEUG00000004684	TRNT1	99	83.834	Notamacropus_eugenii
ENSCLAG00000005186	TRNT1	88	79.427	ENSOPRG00000015067	TRNT1	99	79.427	Ochotona_princeps
ENSCLAG00000005186	TRNT1	100	95.622	ENSODEG00000007597	TRNT1	100	95.622	Octodon_degus
ENSCLAG00000005186	TRNT1	92	75.510	ENSONIG00000020273	trnt1	98	67.529	Oreochromis_niloticus
ENSCLAG00000005186	TRNT1	95	79.310	ENSOANG00000007514	TRNT1	99	74.769	Ornithorhynchus_anatinus
ENSCLAG00000005186	TRNT1	95	89.655	ENSOCUG00000008580	TRNT1	99	85.219	Oryctolagus_cuniculus
ENSCLAG00000005186	TRNT1	90	75.648	ENSORLG00000003165	trnt1	99	66.351	Oryzias_latipes
ENSCLAG00000005186	TRNT1	90	75.648	ENSORLG00020022060	trnt1	99	66.351	Oryzias_latipes_hni
ENSCLAG00000005186	TRNT1	88	73.846	ENSORLG00015018915	trnt1	99	65.330	Oryzias_latipes_hsok
ENSCLAG00000005186	TRNT1	86	78.689	ENSOMEG00000003331	trnt1	97	65.777	Oryzias_melastigma
ENSCLAG00000005186	TRNT1	99	90.069	ENSOARG00000008631	TRNT1	99	90.069	Ovis_aries
ENSCLAG00000005186	TRNT1	99	93.072	ENSPPAG00000043566	TRNT1	99	93.072	Pan_paniscus
ENSCLAG00000005186	TRNT1	99	90.300	ENSPPRG00000001327	TRNT1	99	90.300	Panthera_pardus
ENSCLAG00000005186	TRNT1	99	90.300	ENSPTIG00000011448	TRNT1	99	90.300	Panthera_tigris_altaica
ENSCLAG00000005186	TRNT1	99	93.072	ENSPTRG00000014564	TRNT1	99	93.072	Pan_troglodytes
ENSCLAG00000005186	TRNT1	100	92.396	ENSPANG00000025944	TRNT1	99	92.396	Papio_anubis
ENSCLAG00000005186	TRNT1	98	68.765	ENSPKIG00000020015	trnt1	99	68.765	Paramormyrops_kingsleyae
ENSCLAG00000005186	TRNT1	91	80.303	ENSPSIG00000017356	TRNT1	99	81.944	Pelodiscus_sinensis
ENSCLAG00000005186	TRNT1	92	74.490	ENSPMGG00000008888	trnt1	98	66.353	Periophthalmus_magnuspinnatus
ENSCLAG00000005186	TRNT1	99	92.148	ENSPEMG00000019845	Trnt1	99	92.148	Peromyscus_maniculatus_bairdii
ENSCLAG00000005186	TRNT1	99	84.065	ENSPCIG00000030436	TRNT1	99	84.065	Phascolarctos_cinereus
ENSCLAG00000005186	TRNT1	84	79.330	ENSPFOG00000006194	trnt1	96	68.137	Poecilia_formosa
ENSCLAG00000005186	TRNT1	84	79.330	ENSPLAG00000015623	trnt1	99	67.990	Poecilia_latipinna
ENSCLAG00000005186	TRNT1	84	79.330	ENSPMEG00000012216	trnt1	99	67.990	Poecilia_mexicana
ENSCLAG00000005186	TRNT1	85	77.901	ENSPREG00000021470	trnt1	96	68.049	Poecilia_reticulata
ENSCLAG00000005186	TRNT1	99	93.303	ENSPPYG00000013702	TRNT1	99	93.303	Pongo_abelii
ENSCLAG00000005186	TRNT1	88	90.078	ENSPCAG00000001951	TRNT1	100	90.078	Procavia_capensis
ENSCLAG00000005186	TRNT1	99	93.303	ENSPCOG00000022228	TRNT1	99	93.303	Propithecus_coquereli
ENSCLAG00000005186	TRNT1	88	89.817	ENSPVAG00000008784	TRNT1	99	89.817	Pteropus_vampyrus
ENSCLAG00000005186	TRNT1	92	75.510	ENSPNYG00000003120	trnt1	99	67.529	Pundamilia_nyererei
ENSCLAG00000005186	TRNT1	92	74.874	ENSPNAG00000000565	trnt1	99	67.133	Pygocentrus_nattereri
ENSCLAG00000005186	TRNT1	99	92.774	ENSRNOG00000006432	Trnt1	99	92.774	Rattus_norvegicus
ENSCLAG00000005186	TRNT1	99	90.300	ENSRBIG00000042632	TRNT1	99	90.300	Rhinopithecus_bieti
ENSCLAG00000005186	TRNT1	99	92.148	ENSRROG00000036866	TRNT1	99	92.148	Rhinopithecus_roxellana
ENSCLAG00000005186	TRNT1	99	92.379	ENSSBOG00000021208	TRNT1	99	92.379	Saimiri_boliviensis_boliviensis
ENSCLAG00000005186	TRNT1	99	83.603	ENSSHAG00000018861	TRNT1	99	83.603	Sarcophilus_harrisii
ENSCLAG00000005186	TRNT1	98	68.224	ENSSFOG00015020844	trnt1	99	68.224	Scleropages_formosus
ENSCLAG00000005186	TRNT1	92	75.000	ENSSMAG00000015432	trnt1	97	67.059	Scophthalmus_maximus
ENSCLAG00000005186	TRNT1	92	75.000	ENSSDUG00000012320	trnt1	99	66.353	Seriola_dumerili
ENSCLAG00000005186	TRNT1	56	63.071	ENSSLDG00000016463	-	96	60.870	Seriola_lalandi_dorsalis
ENSCLAG00000005186	TRNT1	92	75.000	ENSSLDG00000009325	trnt1	99	66.353	Seriola_lalandi_dorsalis
ENSCLAG00000005186	TRNT1	88	80.940	ENSSPUG00000014153	TRNT1	99	80.940	Sphenodon_punctatus
ENSCLAG00000005186	TRNT1	92	74.490	ENSSPAG00000021005	trnt1	99	65.647	Stegastes_partitus
ENSCLAG00000005186	TRNT1	99	91.224	ENSSSCG00000011529	TRNT1	99	91.315	Sus_scrofa
ENSCLAG00000005186	TRNT1	93	74.568	ENSTGUG00000010192	TRNT1	99	74.568	Taeniopygia_guttata
ENSCLAG00000005186	TRNT1	92	75.510	ENSTRUG00000001088	trnt1	99	67.765	Takifugu_rubripes
ENSCLAG00000005186	TRNT1	92	76.020	ENSTNIG00000007363	trnt1	98	68.000	Tetraodon_nigroviridis
ENSCLAG00000005186	TRNT1	75	89.375	ENSTBEG00000006367	TRNT1	100	76.404	Tupaia_belangeri
ENSCLAG00000005186	TRNT1	99	90.531	ENSTTRG00000007803	TRNT1	99	90.531	Tursiops_truncatus
ENSCLAG00000005186	TRNT1	99	90.300	ENSUAMG00000022574	TRNT1	99	90.300	Ursus_americanus
ENSCLAG00000005186	TRNT1	99	90.762	ENSUMAG00000024092	TRNT1	99	90.762	Ursus_maritimus
ENSCLAG00000005186	TRNT1	99	90.300	ENSVVUG00000012810	TRNT1	99	90.300	Vulpes_vulpes
ENSCLAG00000005186	TRNT1	98	64.569	ENSXETG00000025091	trnt1	99	66.418	Xenopus_tropicalis
ENSCLAG00000005186	TRNT1	84	79.330	ENSXCOG00000010150	trnt1	96	68.382	Xiphophorus_couchianus
ENSCLAG00000005186	TRNT1	84	78.771	ENSXMAG00000002227	trnt1	96	67.892	Xiphophorus_maculatus