EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005203 (Gene tree)
Gene ID: 102029009
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 105149 bases
Position: chrJH721901.1:11011831-11116979
Accession: 102029009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007399	PPR	PF01535.20	8.3e-37	1	5
ENSCLAP00000007399	PPR	PF01535.20	8.3e-37	2	5
ENSCLAP00000007399	PPR	PF01535.20	8.3e-37	3	5
ENSCLAP00000007399	PPR	PF01535.20	8.3e-37	4	5
ENSCLAP00000007399	PPR	PF01535.20	8.3e-37	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007516	LRPPRC-201	6119	XM_013517542	ENSCLAP00000007399	1396 (aa)	XP_013372996	UPI00038EF854

Gene Model

Click here to download ENSCLAG00000005203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005203	LRPPRC	99	50.210	ENSAPOG00000016610	lrpprc	99	50.210	Acanthochromis_polyacanthus
ENSCLAG00000005203	LRPPRC	98	78.671	ENSAMEG00000005852	LRPPRC	100	78.671	Ailuropoda_melanoleuca
ENSCLAG00000005203	LRPPRC	99	47.989	ENSACIG00000009604	lrpprc	99	47.989	Amphilophus_citrinellus
ENSCLAG00000005203	LRPPRC	99	50.594	ENSAOCG00000005886	lrpprc	99	50.349	Amphiprion_ocellaris
ENSCLAG00000005203	LRPPRC	95	56.088	ENSAPEG00000002937	lrpprc	99	56.088	Amphiprion_percula
ENSCLAG00000005203	LRPPRC	92	55.865	ENSATEG00000010555	lrpprc	98	55.865	Anabas_testudineus
ENSCLAG00000005203	LRPPRC	96	61.255	ENSACAG00000029278	LRPPRC	99	60.000	Anolis_carolinensis
ENSCLAG00000005203	LRPPRC	99	77.714	ENSANAG00000027440	LRPPRC	99	77.857	Aotus_nancymaae
ENSCLAG00000005203	LRPPRC	94	50.189	ENSACLG00000023712	lrpprc	96	50.189	Astatotilapia_calliptera
ENSCLAG00000005203	LRPPRC	99	77.714	ENSCJAG00000000794	LRPPRC	99	77.786	Callithrix_jacchus
ENSCLAG00000005203	LRPPRC	99	80.372	ENSCHIG00000020173	LRPPRC	99	80.372	Capra_hircus
ENSCLAG00000005203	LRPPRC	96	67.084	ENSCAPG00000013631	LRPPRC	99	67.084	Cavia_aperea
ENSCLAG00000005203	LRPPRC	86	85.714	ENSCPOG00000000204	LRPPRC	99	85.714	Cavia_porcellus
ENSCLAG00000005203	LRPPRC	99	77.666	ENSCCAG00000031900	LRPPRC	99	77.666	Cebus_capucinus
ENSCLAG00000005203	LRPPRC	99	77.571	ENSCATG00000014187	LRPPRC	99	76.692	Cercocebus_atys
ENSCLAG00000005203	LRPPRC	99	78.143	ENSCSAG00000013233	LRPPRC	99	78.143	Chlorocebus_sabaeus
ENSCLAG00000005203	LRPPRC	85	77.333	ENSCHOG00000003631	LRPPRC	84	77.333	Choloepus_hoffmanni
ENSCLAG00000005203	LRPPRC	99	74.182	ENSCANG00000034961	LRPPRC	99	81.900	Colobus_angolensis_palliatus
ENSCLAG00000005203	LRPPRC	99	75.948	ENSCGRG00001016261	Lrpprc	99	76.020	Cricetulus_griseus_chok1gshd
ENSCLAG00000005203	LRPPRC	99	75.948	ENSCGRG00000004072	Lrpprc	99	76.020	Cricetulus_griseus_crigri
ENSCLAG00000005203	LRPPRC	99	41.205	ENSCSEG00000003850	lrpprc	96	47.937	Cynoglossus_semilaevis
ENSCLAG00000005203	LRPPRC	99	49.510	ENSCVAG00000012967	lrpprc	99	49.580	Cyprinodon_variegatus
ENSCLAG00000005203	LRPPRC	99	47.666	ENSDARG00000043970	lrpprc	98	47.666	Danio_rerio
ENSCLAG00000005203	LRPPRC	99	76.412	ENSDNOG00000012594	-	99	76.412	Dasypus_novemcinctus
ENSCLAG00000005203	LRPPRC	82	56.658	ENSDNOG00000032336	-	100	56.658	Dasypus_novemcinctus
ENSCLAG00000005203	LRPPRC	99	79.456	ENSDORG00000012233	Lrpprc	99	79.456	Dipodomys_ordii
ENSCLAG00000005203	LRPPRC	99	76.143	ENSETEG00000006657	LRPPRC	99	76.143	Echinops_telfairi
ENSCLAG00000005203	LRPPRC	87	67.871	ENSEEUG00000012340	LRPPRC	92	67.871	Erinaceus_europaeus
ENSCLAG00000005203	LRPPRC	96	48.919	ENSELUG00000012803	lrpprc	98	48.919	Esox_lucius
ENSCLAG00000005203	LRPPRC	100	81.201	ENSFCAG00000013468	LRPPRC	100	81.201	Felis_catus
ENSCLAG00000005203	LRPPRC	96	54.532	ENSFALG00000012738	LRPPRC	99	54.532	Ficedula_albicollis
ENSCLAG00000005203	LRPPRC	99	81.474	ENSFDAG00000015328	LRPPRC	99	81.474	Fukomys_damarensis
ENSCLAG00000005203	LRPPRC	99	49.263	ENSFHEG00000019604	lrpprc	99	49.263	Fundulus_heteroclitus
ENSCLAG00000005203	LRPPRC	99	46.837	ENSGMOG00000008337	lrpprc	99	46.837	Gadus_morhua
ENSCLAG00000005203	LRPPRC	99	49.265	ENSGAFG00000001455	lrpprc	99	49.265	Gambusia_affinis
ENSCLAG00000005203	LRPPRC	99	49.291	ENSGACG00000010679	lrpprc	99	49.890	Gasterosteus_aculeatus
ENSCLAG00000005203	LRPPRC	94	51.880	ENSHBUG00000000393	lrpprc	91	51.880	Haplochromis_burtoni
ENSCLAG00000005203	LRPPRC	99	82.606	ENSHGLG00000006123	LRPPRC	99	82.606	Heterocephalus_glaber_female
ENSCLAG00000005203	LRPPRC	60	83.173	ENSHGLG00100005960	-	99	83.173	Heterocephalus_glaber_male
ENSCLAG00000005203	LRPPRC	99	48.387	ENSHCOG00000002107	lrpprc	100	48.387	Hippocampus_comes
ENSCLAG00000005203	LRPPRC	93	52.167	ENSIPUG00000009406	lrpprc	98	50.592	Ictalurus_punctatus
ENSCLAG00000005203	LRPPRC	99	80.544	ENSSTOG00000011185	LRPPRC	99	80.687	Ictidomys_tridecemlineatus
ENSCLAG00000005203	LRPPRC	99	77.865	ENSJJAG00000020475	Lrpprc	99	77.865	Jaculus_jaculus
ENSCLAG00000005203	LRPPRC	96	47.306	ENSKMAG00000003287	lrpprc	81	47.306	Kryptolebias_marmoratus
ENSCLAG00000005203	LRPPRC	99	44.864	ENSLBEG00000023225	lrpprc	99	50.000	Labrus_bergylta
ENSCLAG00000005203	LRPPRC	99	58.746	ENSLACG00000014030	LRPPRC	99	58.746	Latimeria_chalumnae
ENSCLAG00000005203	LRPPRC	99	55.781	ENSLOCG00000016390	lrpprc	97	55.781	Lepisosteus_oculatus
ENSCLAG00000005203	LRPPRC	100	73.110	ENSLAFG00000008614	LRPPRC	100	73.110	Loxodonta_africana
ENSCLAG00000005203	LRPPRC	99	77.643	ENSMFAG00000041560	LRPPRC	99	76.692	Macaca_fascicularis
ENSCLAG00000005203	LRPPRC	99	76.071	ENSMMUG00000019841	LRPPRC	99	78.746	Macaca_mulatta
ENSCLAG00000005203	LRPPRC	99	77.857	ENSMNEG00000031613	LRPPRC	99	77.929	Macaca_nemestrina
ENSCLAG00000005203	LRPPRC	98	46.662	ENSMAMG00000021835	lrpprc	98	47.009	Mastacembelus_armatus
ENSCLAG00000005203	LRPPRC	94	51.805	ENSMZEG00005027379	lrpprc	92	51.805	Maylandia_zebra
ENSCLAG00000005203	LRPPRC	99	76.092	ENSMAUG00000012118	Lrpprc	99	76.163	Mesocricetus_auratus
ENSCLAG00000005203	LRPPRC	99	80.172	ENSMICG00000010486	LRPPRC	99	80.172	Microcebus_murinus
ENSCLAG00000005203	LRPPRC	99	77.810	ENSMOCG00000006048	Lrpprc	99	77.810	Microtus_ochrogaster
ENSCLAG00000005203	LRPPRC	99	48.216	ENSMMOG00000007830	lrpprc	99	52.680	Mola_mola
ENSCLAG00000005203	LRPPRC	96	66.593	ENSMODG00000000648	LRPPRC	99	66.593	Monodelphis_domestica
ENSCLAG00000005203	LRPPRC	99	48.805	ENSMALG00000001271	lrpprc	99	48.840	Monopterus_albus
ENSCLAG00000005203	LRPPRC	100	78.016	ENSMPUG00000011800	LRPPRC	99	80.235	Mustela_putorius_furo
ENSCLAG00000005203	LRPPRC	100	79.000	ENSMLUG00000010575	LRPPRC	100	79.000	Myotis_lucifugus
ENSCLAG00000005203	LRPPRC	99	77.666	ENSNGAG00000013069	Lrpprc	99	77.666	Nannospalax_galili
ENSCLAG00000005203	LRPPRC	94	48.260	ENSNBRG00000013202	lrpprc	99	48.260	Neolamprologus_brichardi
ENSCLAG00000005203	LRPPRC	99	75.645	ENSNLEG00000016782	LRPPRC	99	76.880	Nomascus_leucogenys
ENSCLAG00000005203	LRPPRC	93	73.832	ENSOPRG00000016774	LRPPRC	93	73.832	Ochotona_princeps
ENSCLAG00000005203	LRPPRC	99	87.464	ENSODEG00000011211	LRPPRC	99	87.464	Octodon_degus
ENSCLAG00000005203	LRPPRC	99	49.929	ENSONIG00000000917	lrpprc	99	49.929	Oreochromis_niloticus
ENSCLAG00000005203	LRPPRC	54	60.836	ENSOANG00000014670	-	99	60.836	Ornithorhynchus_anatinus
ENSCLAG00000005203	LRPPRC	100	80.401	ENSOCUG00000015046	LRPPRC	96	80.401	Oryctolagus_cuniculus
ENSCLAG00000005203	LRPPRC	99	48.028	ENSORLG00000004605	lrpprc	99	46.852	Oryzias_latipes
ENSCLAG00000005203	LRPPRC	91	51.431	ENSORLG00020012536	lrpprc	99	50.556	Oryzias_latipes_hni
ENSCLAG00000005203	LRPPRC	99	47.486	ENSORLG00015018270	lrpprc	98	52.485	Oryzias_latipes_hsok
ENSCLAG00000005203	LRPPRC	99	77.292	ENSOGAG00000012798	LRPPRC	99	77.292	Otolemur_garnettii
ENSCLAG00000005203	LRPPRC	99	80.615	ENSOARG00000006522	LRPPRC	99	80.615	Ovis_aries
ENSCLAG00000005203	LRPPRC	99	74.286	ENSPPAG00000040876	LRPPRC	99	75.047	Pan_paniscus
ENSCLAG00000005203	LRPPRC	100	80.701	ENSPPRG00000006578	LRPPRC	100	80.701	Panthera_pardus
ENSCLAG00000005203	LRPPRC	97	81.282	ENSPTIG00000000933	LRPPRC	97	81.282	Panthera_tigris_altaica
ENSCLAG00000005203	LRPPRC	99	76.791	ENSPTRG00000011880	LRPPRC	99	76.791	Pan_troglodytes
ENSCLAG00000005203	LRPPRC	99	77.269	ENSPANG00000020731	LRPPRC	99	76.316	Papio_anubis
ENSCLAG00000005203	LRPPRC	89	56.979	ENSPKIG00000022232	lrpprc	96	56.979	Paramormyrops_kingsleyae
ENSCLAG00000005203	LRPPRC	61	63.372	ENSPSIG00000006830	-	99	63.372	Pelodiscus_sinensis
ENSCLAG00000005203	LRPPRC	58	48.708	ENSPMGG00000016597	lrpprc	89	48.708	Periophthalmus_magnuspinnatus
ENSCLAG00000005203	LRPPRC	93	44.597	ENSPMAG00000002147	lrpprc	99	44.597	Petromyzon_marinus
ENSCLAG00000005203	LRPPRC	99	48.839	ENSPFOG00000011227	lrpprc	99	49.395	Poecilia_formosa
ENSCLAG00000005203	LRPPRC	99	48.628	ENSPLAG00000004018	lrpprc	99	48.664	Poecilia_latipinna
ENSCLAG00000005203	LRPPRC	99	48.875	ENSPMEG00000016425	lrpprc	99	48.875	Poecilia_mexicana
ENSCLAG00000005203	LRPPRC	99	48.794	ENSPREG00000003662	lrpprc	99	48.772	Poecilia_reticulata
ENSCLAG00000005203	LRPPRC	57	76.250	ENSPPYG00000029532	-	99	76.250	Pongo_abelii
ENSCLAG00000005203	LRPPRC	84	72.727	ENSPCAG00000001430	LRPPRC	84	72.727	Procavia_capensis
ENSCLAG00000005203	LRPPRC	100	77.055	ENSPVAG00000002007	LRPPRC	100	77.055	Pteropus_vampyrus
ENSCLAG00000005203	LRPPRC	99	47.946	ENSPNYG00000000756	lrpprc	99	47.875	Pundamilia_nyererei
ENSCLAG00000005203	LRPPRC	99	52.401	ENSPNAG00000002895	lrpprc	99	52.401	Pygocentrus_nattereri
ENSCLAG00000005203	LRPPRC	99	76.664	ENSRNOG00000005877	Lrpprc	99	76.664	Rattus_norvegicus
ENSCLAG00000005203	LRPPRC	99	75.835	ENSRBIG00000031552	LRPPRC	99	75.835	Rhinopithecus_bieti
ENSCLAG00000005203	LRPPRC	99	77.452	ENSSBOG00000011807	LRPPRC	99	77.523	Saimiri_boliviensis_boliviensis
ENSCLAG00000005203	LRPPRC	96	65.059	ENSSHAG00000018725	LRPPRC	99	65.059	Sarcophilus_harrisii
ENSCLAG00000005203	LRPPRC	99	49.548	ENSSFOG00015001042	lrpprc	99	49.548	Scleropages_formosus
ENSCLAG00000005203	LRPPRC	99	49.755	ENSSDUG00000019062	lrpprc	99	49.755	Seriola_dumerili
ENSCLAG00000005203	LRPPRC	99	43.621	ENSSLDG00000023028	lrpprc	99	43.763	Seriola_lalandi_dorsalis
ENSCLAG00000005203	LRPPRC	87	69.719	ENSSARG00000000426	LRPPRC	100	69.719	Sorex_araneus
ENSCLAG00000005203	LRPPRC	99	46.377	ENSSPAG00000000162	lrpprc	99	46.616	Stegastes_partitus
ENSCLAG00000005203	LRPPRC	100	79.971	ENSSSCG00000008452	LRPPRC	100	79.971	Sus_scrofa
ENSCLAG00000005203	LRPPRC	94	55.319	ENSTGUG00000003759	LRPPRC	99	55.319	Taeniopygia_guttata
ENSCLAG00000005203	LRPPRC	99	49.579	ENSTRUG00000008409	lrpprc	96	49.579	Takifugu_rubripes
ENSCLAG00000005203	LRPPRC	99	48.865	ENSTNIG00000007470	lrpprc	99	49.375	Tetraodon_nigroviridis
ENSCLAG00000005203	LRPPRC	100	77.396	ENSTTRG00000006403	LRPPRC	100	77.396	Tursiops_truncatus
ENSCLAG00000005203	LRPPRC	96	74.703	ENSVPAG00000008993	LRPPRC	100	74.703	Vicugna_pacos
ENSCLAG00000005203	LRPPRC	100	58.033	ENSXETG00000009296	lrpprc	99	58.033	Xenopus_tropicalis
ENSCLAG00000005203	LRPPRC	99	45.712	ENSXCOG00000013343	lrpprc	95	51.779	Xiphophorus_couchianus
ENSCLAG00000005203	LRPPRC	99	49.335	ENSXMAG00000018108	lrpprc	99	49.335	Xiphophorus_maculatus