EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000005228 (Gene tree)
Gene ID: 102025909
Gene Symbol: RALYL
Alias: HNRPCL3
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 338104 bases
Position: chrJH721877.1:2409841-2747944
Accession: 102025909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007439	RRM_1	PF00076.22	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007557	RALYL-202	1805	XM_005381727	ENSCLAP00000007440	219 (aa)	XP_005381784	UPI00038ECA93
ENSCLAT00000007556	RALYL-201	879	XM_005381724	ENSCLAP00000007439	292 (aa)	XP_005381781	UPI00038EF79B
ENSCLAT00000007559	RALYL-204	444	-	ENSCLAP00000007442	147 (aa)	-	-
ENSCLAT00000007558	RALYL-203	1632	-	ENSCLAP00000007441	163 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000005228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000005228	RALYL	88	54.682	ENSCLAG00000000947	HNRNPC	93	52.189
ENSCLAG00000005228	RALYL	80	63.559	ENSCLAG00000016899	RALY	72	64.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005228	RALYL	100	96.233	ENSG00000184672	RALYL	100	100.000	Homo_sapiens
ENSCLAG00000005228	RALYL	77	52.966	ENSAPOG00000006963	hnrnpc	70	53.043	Acanthochromis_polyacanthus
ENSCLAG00000005228	RALYL	75	55.365	ENSACIG00000000270	-	95	46.823	Amphilophus_citrinellus
ENSCLAG00000005228	RALYL	82	51.653	ENSACIG00000016568	-	99	47.500	Amphilophus_citrinellus
ENSCLAG00000005228	RALYL	78	53.648	ENSAOCG00000021616	-	70	55.605	Amphiprion_ocellaris
ENSCLAG00000005228	RALYL	77	52.966	ENSAOCG00000003896	-	70	53.043	Amphiprion_ocellaris
ENSCLAG00000005228	RALYL	83	52.033	ENSAPEG00000019962	-	97	46.154	Amphiprion_percula
ENSCLAG00000005228	RALYL	77	52.966	ENSAPEG00000001489	-	70	53.043	Amphiprion_percula
ENSCLAG00000005228	RALYL	78	54.506	ENSATEG00000011734	-	95	47.315	Anabas_testudineus
ENSCLAG00000005228	RALYL	75	56.054	ENSATEG00000018006	-	95	48.175	Anabas_testudineus
ENSCLAG00000005228	RALYL	98	92.069	ENSAPLG00000015574	RALYL	100	91.724	Anas_platyrhynchos
ENSCLAG00000005228	RALYL	100	91.126	ENSACAG00000028464	RALYL	100	91.126	Anolis_carolinensis
ENSCLAG00000005228	RALYL	100	96.575	ENSANAG00000023383	RALYL	96	96.575	Aotus_nancymaae
ENSCLAG00000005228	RALYL	81	52.917	ENSACLG00000005707	-	93	48.123	Astatotilapia_calliptera
ENSCLAG00000005228	RALYL	74	54.348	ENSACLG00000013636	-	90	45.819	Astatotilapia_calliptera
ENSCLAG00000005228	RALYL	75	56.000	ENSACLG00000000995	-	79	54.222	Astatotilapia_calliptera
ENSCLAG00000005228	RALYL	69	48.293	ENSAMXG00000042946	hnrnpc	94	49.495	Astyanax_mexicanus
ENSCLAG00000005228	RALYL	79	52.282	ENSAMXG00000034915	zgc:55733	79	52.119	Astyanax_mexicanus
ENSCLAG00000005228	RALYL	100	96.575	ENSCJAG00000000402	RALYL	96	96.575	Callithrix_jacchus
ENSCLAG00000005228	RALYL	100	99.315	ENSCPOG00000012314	RALYL	100	99.315	Cavia_porcellus
ENSCLAG00000005228	RALYL	100	96.233	ENSCCAG00000025003	RALYL	96	94.521	Cebus_capucinus
ENSCLAG00000005228	RALYL	100	96.233	ENSCATG00000042145	RALYL	96	94.521	Cercocebus_atys
ENSCLAG00000005228	RALYL	78	89.565	ENSCHOG00000013228	RALYL	78	89.565	Choloepus_hoffmanni
ENSCLAG00000005228	RALYL	100	95.890	ENSCANG00000039144	RALYL	96	94.178	Colobus_angolensis_palliatus
ENSCLAG00000005228	RALYL	100	97.952	ENSCGRG00001009241	Ralyl	100	97.952	Cricetulus_griseus_chok1gshd
ENSCLAG00000005228	RALYL	74	51.786	ENSCSEG00000019769	-	71	51.092	Cynoglossus_semilaevis
ENSCLAG00000005228	RALYL	75	55.157	ENSCSEG00000021349	-	89	48.311	Cynoglossus_semilaevis
ENSCLAG00000005228	RALYL	94	44.484	ENSCVAG00000002797	-	97	44.590	Cyprinodon_variegatus
ENSCLAG00000005228	RALYL	74	54.911	ENSCVAG00000016981	-	65	54.464	Cyprinodon_variegatus
ENSCLAG00000005228	RALYL	93	48.188	ENSDARG00000103845	zgc:55733	94	46.786	Danio_rerio
ENSCLAG00000005228	RALYL	79	52.941	ENSDARG00000053810	hnrnpc	71	51.489	Danio_rerio
ENSCLAG00000005228	RALYL	100	98.294	ENSDORG00000003721	Ralyl	100	98.294	Dipodomys_ordii
ENSCLAG00000005228	RALYL	65	96.354	ENSETEG00000014028	RALYL	100	96.354	Echinops_telfairi
ENSCLAG00000005228	RALYL	99	44.483	ENSEBUG00000006049	RALYL	98	45.548	Eptatretus_burgeri
ENSCLAG00000005228	RALYL	81	45.783	ENSEBUG00000012363	hnrnpc	72	44.318	Eptatretus_burgeri
ENSCLAG00000005228	RALYL	98	96.528	ENSEEUG00000007202	RALYL	100	96.528	Erinaceus_europaeus
ENSCLAG00000005228	RALYL	79	54.430	ENSELUG00000004132	-	94	48.264	Esox_lucius
ENSCLAG00000005228	RALYL	81	51.852	ENSELUG00000007714	-	96	44.948	Esox_lucius
ENSCLAG00000005228	RALYL	98	90.690	ENSFALG00000008647	RALYL	100	90.345	Ficedula_albicollis
ENSCLAG00000005228	RALYL	77	53.680	ENSFHEG00000003605	-	73	51.261	Fundulus_heteroclitus
ENSCLAG00000005228	RALYL	75	51.452	ENSFHEG00000007278	-	69	51.464	Fundulus_heteroclitus
ENSCLAG00000005228	RALYL	100	89.831	ENSGALG00000036938	RALYL	100	90.847	Gallus_gallus
ENSCLAG00000005228	RALYL	74	54.911	ENSGAFG00000020486	-	80	51.754	Gambusia_affinis
ENSCLAG00000005228	RALYL	75	55.204	ENSGAFG00000020992	-	91	47.959	Gambusia_affinis
ENSCLAG00000005228	RALYL	74	46.610	ENSGACG00000018932	-	84	48.052	Gasterosteus_aculeatus
ENSCLAG00000005228	RALYL	75	53.947	ENSGACG00000017772	-	83	53.478	Gasterosteus_aculeatus
ENSCLAG00000005228	RALYL	100	96.233	ENSGGOG00000000841	RALYL	96	94.521	Gorilla_gorilla
ENSCLAG00000005228	RALYL	79	54.274	ENSHBUG00000010527	-	85	48.621	Haplochromis_burtoni
ENSCLAG00000005228	RALYL	74	54.783	ENSHBUG00000018342	-	72	52.743	Haplochromis_burtoni
ENSCLAG00000005228	RALYL	100	98.973	ENSHGLG00000004866	RALYL	100	98.973	Heterocephalus_glaber_female
ENSCLAG00000005228	RALYL	100	98.973	ENSHGLG00100017480	RALYL	100	98.973	Heterocephalus_glaber_male
ENSCLAG00000005228	RALYL	79	52.245	ENSHCOG00000012333	hnrnpc	76	51.210	Hippocampus_comes
ENSCLAG00000005228	RALYL	82	53.306	ENSIPUG00000008666	zgc:55733	93	54.425	Ictalurus_punctatus
ENSCLAG00000005228	RALYL	77	53.478	ENSIPUG00000011271	hnrnpc	95	55.357	Ictalurus_punctatus
ENSCLAG00000005228	RALYL	98	99.306	ENSSTOG00000012583	RALYL	100	99.306	Ictidomys_tridecemlineatus
ENSCLAG00000005228	RALYL	74	55.856	ENSKMAG00000018265	-	81	49.117	Kryptolebias_marmoratus
ENSCLAG00000005228	RALYL	94	48.601	ENSKMAG00000011170	-	98	45.734	Kryptolebias_marmoratus
ENSCLAG00000005228	RALYL	77	53.247	ENSLBEG00000006979	-	73	52.838	Labrus_bergylta
ENSCLAG00000005228	RALYL	75	55.357	ENSLBEG00000006193	-	84	48.780	Labrus_bergylta
ENSCLAG00000005228	RALYL	77	51.261	ENSLBEG00000024418	-	74	51.528	Labrus_bergylta
ENSCLAG00000005228	RALYL	76	51.092	ENSLOCG00000002560	hnrnpc	84	48.249	Lepisosteus_oculatus
ENSCLAG00000005228	RALYL	100	96.233	ENSMNEG00000033288	RALYL	96	94.521	Macaca_nemestrina
ENSCLAG00000005228	RALYL	100	96.233	ENSMLEG00000038284	RALYL	96	94.521	Mandrillus_leucophaeus
ENSCLAG00000005228	RALYL	77	55.983	ENSMAMG00000012236	-	74	54.783	Mastacembelus_armatus
ENSCLAG00000005228	RALYL	75	56.054	ENSMAMG00000008033	-	74	56.000	Mastacembelus_armatus
ENSCLAG00000005228	RALYL	81	52.917	ENSMZEG00005024249	-	87	47.782	Maylandia_zebra
ENSCLAG00000005228	RALYL	75	54.425	ENSMZEG00005020460	-	77	53.043	Maylandia_zebra
ENSCLAG00000005228	RALYL	100	97.952	ENSMAUG00000015149	Ralyl	100	97.952	Mesocricetus_auratus
ENSCLAG00000005228	RALYL	100	97.603	ENSMICG00000005558	RALYL	96	97.603	Microcebus_murinus
ENSCLAG00000005228	RALYL	100	94.881	ENSMOCG00000017371	Ralyl	100	94.881	Microtus_ochrogaster
ENSCLAG00000005228	RALYL	81	51.037	ENSMMOG00000019520	-	99	49.462	Mola_mola
ENSCLAG00000005228	RALYL	79	52.459	ENSMMOG00000021465	-	95	47.619	Mola_mola
ENSCLAG00000005228	RALYL	74	51.598	ENSMALG00000007520	-	95	47.902	Monopterus_albus
ENSCLAG00000005228	RALYL	79	55.745	ENSMALG00000014623	-	70	54.468	Monopterus_albus
ENSCLAG00000005228	RALYL	100	97.270	ENSMUSG00000039717	Ralyl	100	97.647	Mus_musculus
ENSCLAG00000005228	RALYL	100	98.294	ENSMPUG00000010724	RALYL	100	98.294	Mustela_putorius_furo
ENSCLAG00000005228	RALYL	100	96.587	ENSNGAG00000013375	Ralyl	100	96.587	Nannospalax_galili
ENSCLAG00000005228	RALYL	78	56.838	ENSNBRG00000004912	-	94	54.077	Neolamprologus_brichardi
ENSCLAG00000005228	RALYL	79	54.274	ENSNBRG00000015676	-	84	49.129	Neolamprologus_brichardi
ENSCLAG00000005228	RALYL	100	92.123	ENSNLEG00000002702	RALYL	96	90.411	Nomascus_leucogenys
ENSCLAG00000005228	RALYL	65	87.958	ENSOPRG00000013650	-	100	87.958	Ochotona_princeps
ENSCLAG00000005228	RALYL	100	98.288	ENSODEG00000001012	RALYL	100	98.288	Octodon_degus
ENSCLAG00000005228	RALYL	77	54.701	ENSONIG00000007859	-	78	54.237	Oreochromis_niloticus
ENSCLAG00000005228	RALYL	79	54.274	ENSONIG00000018350	-	69	54.978	Oreochromis_niloticus
ENSCLAG00000005228	RALYL	74	54.386	ENSORLG00000003144	-	83	48.136	Oryzias_latipes
ENSCLAG00000005228	RALYL	78	49.787	ENSORLG00000009999	-	72	48.536	Oryzias_latipes
ENSCLAG00000005228	RALYL	78	49.787	ENSORLG00020018228	hnrnpc	72	48.536	Oryzias_latipes_hni
ENSCLAG00000005228	RALYL	78	49.787	ENSORLG00015019755	-	72	48.536	Oryzias_latipes_hsok
ENSCLAG00000005228	RALYL	74	54.386	ENSORLG00015009460	-	81	48.288	Oryzias_latipes_hsok
ENSCLAG00000005228	RALYL	74	56.109	ENSOMEG00000022665	-	83	49.306	Oryzias_melastigma
ENSCLAG00000005228	RALYL	78	50.638	ENSOMEG00000020488	-	72	49.372	Oryzias_melastigma
ENSCLAG00000005228	RALYL	100	96.233	ENSPPAG00000038705	RALYL	98	94.521	Pan_paniscus
ENSCLAG00000005228	RALYL	100	98.635	ENSPPRG00000018612	RALYL	96	98.635	Panthera_pardus
ENSCLAG00000005228	RALYL	100	98.294	ENSPTIG00000020331	RALYL	96	98.294	Panthera_tigris_altaica
ENSCLAG00000005228	RALYL	100	96.233	ENSPTRG00000020381	RALYL	96	94.521	Pan_troglodytes
ENSCLAG00000005228	RALYL	100	96.233	ENSPANG00000029305	RALYL	96	94.521	Papio_anubis
ENSCLAG00000005228	RALYL	79	52.227	ENSPKIG00000008592	-	71	54.008	Paramormyrops_kingsleyae
ENSCLAG00000005228	RALYL	80	55.230	ENSPKIG00000022837	-	85	50.534	Paramormyrops_kingsleyae
ENSCLAG00000005228	RALYL	100	90.169	ENSPSIG00000011135	RALYL	100	90.169	Pelodiscus_sinensis
ENSCLAG00000005228	RALYL	75	55.702	ENSPMGG00000017774	-	89	48.018	Periophthalmus_magnuspinnatus
ENSCLAG00000005228	RALYL	75	55.111	ENSPMGG00000013144	-	98	48.214	Periophthalmus_magnuspinnatus
ENSCLAG00000005228	RALYL	100	97.611	ENSPEMG00000016447	Ralyl	100	97.611	Peromyscus_maniculatus_bairdii
ENSCLAG00000005228	RALYL	77	68.398	ENSPMAG00000002407	RALYL	100	66.957	Petromyzon_marinus
ENSCLAG00000005228	RALYL	74	55.455	ENSPFOG00000002643	-	65	55.405	Poecilia_formosa
ENSCLAG00000005228	RALYL	74	55.357	ENSPFOG00000001583	-	73	52.101	Poecilia_formosa
ENSCLAG00000005228	RALYL	74	54.018	ENSPLAG00000015305	-	73	50.420	Poecilia_latipinna
ENSCLAG00000005228	RALYL	74	55.455	ENSPLAG00000000061	-	65	55.405	Poecilia_latipinna
ENSCLAG00000005228	RALYL	74	54.911	ENSPMEG00000004802	-	73	50.840	Poecilia_mexicana
ENSCLAG00000005228	RALYL	74	55.455	ENSPMEG00000016524	-	66	54.911	Poecilia_mexicana
ENSCLAG00000005228	RALYL	74	55.000	ENSPREG00000001852	-	89	47.552	Poecilia_reticulata
ENSCLAG00000005228	RALYL	74	55.856	ENSPREG00000007928	-	73	51.681	Poecilia_reticulata
ENSCLAG00000005228	RALYL	75	99.174	ENSPPYG00000018710	-	100	99.174	Pongo_abelii
ENSCLAG00000005228	RALYL	100	88.699	ENSPVAG00000010821	RALYL	99	88.699	Pteropus_vampyrus
ENSCLAG00000005228	RALYL	79	54.274	ENSPNYG00000003747	-	90	48.780	Pundamilia_nyererei
ENSCLAG00000005228	RALYL	75	58.590	ENSPNYG00000020293	-	85	55.310	Pundamilia_nyererei
ENSCLAG00000005228	RALYL	77	53.680	ENSPNAG00000015686	hnrnpc	74	54.545	Pygocentrus_nattereri
ENSCLAG00000005228	RALYL	83	51.406	ENSPNAG00000019200	zgc:55733	79	51.406	Pygocentrus_nattereri
ENSCLAG00000005228	RALYL	100	96.233	ENSRROG00000023925	RALYL	96	94.521	Rhinopithecus_roxellana
ENSCLAG00000005228	RALYL	77	55.794	ENSSFOG00015012924	-	96	67.368	Scleropages_formosus
ENSCLAG00000005228	RALYL	79	53.252	ENSSFOG00015012015	-	99	47.500	Scleropages_formosus
ENSCLAG00000005228	RALYL	78	51.073	ENSSMAG00000013592	-	71	50.211	Scophthalmus_maximus
ENSCLAG00000005228	RALYL	77	54.825	ENSSMAG00000011147	-	83	48.621	Scophthalmus_maximus
ENSCLAG00000005228	RALYL	77	54.825	ENSSDUG00000001723	-	72	51.899	Seriola_dumerili
ENSCLAG00000005228	RALYL	78	54.701	ENSSDUG00000006730	-	83	49.123	Seriola_dumerili
ENSCLAG00000005228	RALYL	78	54.701	ENSSLDG00000007474	-	91	49.123	Seriola_lalandi_dorsalis
ENSCLAG00000005228	RALYL	74	57.273	ENSSLDG00000007454	-	68	54.709	Seriola_lalandi_dorsalis
ENSCLAG00000005228	RALYL	79	92.632	ENSSARG00000002374	RALYL	78	92.473	Sorex_araneus
ENSCLAG00000005228	RALYL	75	55.605	ENSSPAG00000013996	-	67	55.556	Stegastes_partitus
ENSCLAG00000005228	RALYL	78	53.527	ENSSPAG00000023204	-	72	52.321	Stegastes_partitus
ENSCLAG00000005228	RALYL	98	91.034	ENSTGUG00000011689	RALYL	100	90.690	Taeniopygia_guttata
ENSCLAG00000005228	RALYL	75	52.915	ENSTRUG00000020158	-	94	44.482	Takifugu_rubripes
ENSCLAG00000005228	RALYL	79	52.564	ENSTNIG00000000334	-	99	47.482	Tetraodon_nigroviridis
ENSCLAG00000005228	RALYL	74	51.121	ENSTNIG00000007427	-	73	48.085	Tetraodon_nigroviridis
ENSCLAG00000005228	RALYL	87	86.614	ENSTBEG00000005551	RALYL	100	84.646	Tupaia_belangeri
ENSCLAG00000005228	RALYL	100	92.150	ENSTTRG00000015762	RALYL	100	92.150	Tursiops_truncatus
ENSCLAG00000005228	RALYL	99	92.759	ENSVPAG00000008501	RALYL	100	92.759	Vicugna_pacos
ENSCLAG00000005228	RALYL	74	53.363	ENSXCOG00000006552	-	88	46.735	Xiphophorus_couchianus
ENSCLAG00000005228	RALYL	54	61.111	ENSXCOG00000019434	-	73	57.225	Xiphophorus_couchianus
ENSCLAG00000005228	RALYL	93	48.214	ENSXMAG00000009333	-	73	50.840	Xiphophorus_maculatus
ENSCLAG00000005228	RALYL	74	54.545	ENSXMAG00000022849	-	86	47.203	Xiphophorus_maculatus