EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005262 (Gene tree)
Gene ID: 102015692
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 67351 bases
Position: chrJH721867.1:31848012-31915362
Accession: 102015692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007488	Npa1	PF11707.8	9.4e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007605	URB1-201	8464	XM_005375666	ENSCLAP00000007488	2271 (aa)	XP_005375723	UPI00038EC73D

Gene Model

Click here to download ENSCLAG00000005262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005262's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005262	URB1	99	81.156	ENSG00000142207	URB1	100	81.055	Homo_sapiens
ENSCLAG00000005262	URB1	99	43.490	ENSAPOG00000020308	urb1	100	43.533	Acanthochromis_polyacanthus
ENSCLAG00000005262	URB1	100	78.374	ENSAMEG00000011998	URB1	99	78.462	Ailuropoda_melanoleuca
ENSCLAG00000005262	URB1	95	44.659	ENSACIG00000003248	urb1	96	44.613	Amphilophus_citrinellus
ENSCLAG00000005262	URB1	99	41.486	ENSAOCG00000010364	urb1	100	41.225	Amphiprion_ocellaris
ENSCLAG00000005262	URB1	99	42.919	ENSAPEG00000010758	urb1	100	42.963	Amphiprion_percula
ENSCLAG00000005262	URB1	98	45.114	ENSATEG00000011790	urb1	97	45.114	Anabas_testudineus
ENSCLAG00000005262	URB1	97	55.446	ENSAPLG00000012791	URB1	100	55.581	Anas_platyrhynchos
ENSCLAG00000005262	URB1	99	52.850	ENSACAG00000002817	URB1	98	52.799	Anolis_carolinensis
ENSCLAG00000005262	URB1	100	80.553	ENSANAG00000024617	URB1	100	80.553	Aotus_nancymaae
ENSCLAG00000005262	URB1	99	45.302	ENSACLG00000024865	urb1	100	44.963	Astatotilapia_calliptera
ENSCLAG00000005262	URB1	99	40.458	ENSAMXG00000012306	urb1	99	40.370	Astyanax_mexicanus
ENSCLAG00000005262	URB1	99	75.198	ENSBTAG00000012412	URB1	99	75.285	Bos_taurus
ENSCLAG00000005262	URB1	99	80.185	ENSCJAG00000009118	URB1	99	80.185	Callithrix_jacchus
ENSCLAG00000005262	URB1	100	77.870	ENSCAFG00000008892	URB1	100	77.870	Canis_familiaris
ENSCLAG00000005262	URB1	100	76.615	ENSCAFG00020025994	-	100	76.615	Canis_lupus_dingo
ENSCLAG00000005262	URB1	100	77.714	ENSCAFG00020025987	-	100	77.714	Canis_lupus_dingo
ENSCLAG00000005262	URB1	99	74.934	ENSCHIG00000015645	URB1	99	75.066	Capra_hircus
ENSCLAG00000005262	URB1	100	80.431	ENSTSYG00000013286	URB1	99	80.431	Carlito_syrichta
ENSCLAG00000005262	URB1	98	85.592	ENSCAPG00000015589	URB1	99	85.592	Cavia_aperea
ENSCLAG00000005262	URB1	99	86.866	ENSCPOG00000006748	URB1	99	86.866	Cavia_porcellus
ENSCLAG00000005262	URB1	100	80.352	ENSCCAG00000021299	URB1	100	80.352	Cebus_capucinus
ENSCLAG00000005262	URB1	100	80.791	ENSCATG00000042630	URB1	100	80.791	Cercocebus_atys
ENSCLAG00000005262	URB1	100	79.168	ENSCSAG00000009584	URB1	100	79.168	Chlorocebus_sabaeus
ENSCLAG00000005262	URB1	99	57.835	ENSCPBG00000006454	URB1	99	58.017	Chrysemys_picta_bellii
ENSCLAG00000005262	URB1	100	80.703	ENSCANG00000031088	URB1	100	80.703	Colobus_angolensis_palliatus
ENSCLAG00000005262	URB1	99	76.560	ENSCGRG00001010616	Urb1	100	76.199	Cricetulus_griseus_chok1gshd
ENSCLAG00000005262	URB1	98	76.259	ENSCGRG00000015840	Urb1	100	76.259	Cricetulus_griseus_crigri
ENSCLAG00000005262	URB1	97	48.421	ENSCSEG00000012616	urb1	99	48.421	Cynoglossus_semilaevis
ENSCLAG00000005262	URB1	93	55.097	ENSCVAG00000009076	urb1	98	53.270	Cyprinodon_variegatus
ENSCLAG00000005262	URB1	99	43.993	ENSDARG00000060308	urb1	99	43.993	Danio_rerio
ENSCLAG00000005262	URB1	85	77.416	ENSDNOG00000015586	URB1	99	77.416	Dasypus_novemcinctus
ENSCLAG00000005262	URB1	99	80.167	ENSDORG00000006735	Urb1	100	80.106	Dipodomys_ordii
ENSCLAG00000005262	URB1	92	79.455	ENSETEG00000009080	URB1	92	79.455	Echinops_telfairi
ENSCLAG00000005262	URB1	99	78.521	ENSEASG00005007711	URB1	99	78.521	Equus_asinus_asinus
ENSCLAG00000005262	URB1	97	86.538	ENSECAG00000013206	URB1	99	86.441	Equus_caballus
ENSCLAG00000005262	URB1	57	84.647	ENSEEUG00000003626	-	55	84.647	Erinaceus_europaeus
ENSCLAG00000005262	URB1	99	45.186	ENSELUG00000020516	urb1	99	45.147	Esox_lucius
ENSCLAG00000005262	URB1	99	78.458	ENSFCAG00000002177	URB1	99	78.458	Felis_catus
ENSCLAG00000005262	URB1	98	51.123	ENSFALG00000004636	URB1	99	51.282	Ficedula_albicollis
ENSCLAG00000005262	URB1	100	86.324	ENSFDAG00000007288	URB1	95	86.324	Fukomys_damarensis
ENSCLAG00000005262	URB1	99	42.377	ENSFHEG00000000202	urb1	99	43.328	Fundulus_heteroclitus
ENSCLAG00000005262	URB1	93	47.710	ENSGMOG00000001838	urb1	94	47.710	Gadus_morhua
ENSCLAG00000005262	URB1	99	56.143	ENSGALG00000015887	URB1	99	55.969	Gallus_gallus
ENSCLAG00000005262	URB1	93	52.778	ENSGAFG00000020694	urb1	98	52.778	Gambusia_affinis
ENSCLAG00000005262	URB1	98	44.989	ENSGACG00000011703	urb1	99	44.989	Gasterosteus_aculeatus
ENSCLAG00000005262	URB1	99	57.567	ENSGAGG00000022544	URB1	99	57.567	Gopherus_agassizii
ENSCLAG00000005262	URB1	100	81.099	ENSGGOG00000000285	URB1	100	81.099	Gorilla_gorilla
ENSCLAG00000005262	URB1	99	45.258	ENSHBUG00000001904	urb1	100	44.919	Haplochromis_burtoni
ENSCLAG00000005262	URB1	99	86.099	ENSHGLG00000004907	URB1	99	86.099	Heterocephalus_glaber_female
ENSCLAG00000005262	URB1	99	86.840	ENSHGLG00100010749	URB1	99	86.840	Heterocephalus_glaber_male
ENSCLAG00000005262	URB1	70	51.946	ENSHCOG00000018683	urb1	97	52.529	Hippocampus_comes
ENSCLAG00000005262	URB1	99	41.127	ENSIPUG00000014721	urb1	99	40.807	Ictalurus_punctatus
ENSCLAG00000005262	URB1	99	81.630	ENSSTOG00000004539	URB1	99	81.630	Ictidomys_tridecemlineatus
ENSCLAG00000005262	URB1	99	46.200	ENSKMAG00000006001	urb1	99	48.471	Kryptolebias_marmoratus
ENSCLAG00000005262	URB1	94	50.894	ENSLBEG00000027208	urb1	99	50.894	Labrus_bergylta
ENSCLAG00000005262	URB1	99	48.127	ENSLACG00000017059	URB1	100	48.127	Latimeria_chalumnae
ENSCLAG00000005262	URB1	99	45.821	ENSLOCG00000009190	urb1	99	45.691	Lepisosteus_oculatus
ENSCLAG00000005262	URB1	99	76.447	ENSLAFG00000010407	URB1	100	76.447	Loxodonta_africana
ENSCLAG00000005262	URB1	100	80.791	ENSMFAG00000034391	URB1	97	80.791	Macaca_fascicularis
ENSCLAG00000005262	URB1	100	80.703	ENSMMUG00000010295	URB1	100	80.703	Macaca_mulatta
ENSCLAG00000005262	URB1	100	79.341	ENSMNEG00000032981	URB1	100	79.341	Macaca_nemestrina
ENSCLAG00000005262	URB1	100	80.879	ENSMLEG00000041435	URB1	100	80.879	Mandrillus_leucophaeus
ENSCLAG00000005262	URB1	99	43.810	ENSMAMG00000011238	urb1	99	43.761	Mastacembelus_armatus
ENSCLAG00000005262	URB1	99	42.205	ENSMZEG00005011862	urb1	100	41.902	Maylandia_zebra
ENSCLAG00000005262	URB1	98	56.005	ENSMGAG00000014512	URB1	99	55.827	Meleagris_gallopavo
ENSCLAG00000005262	URB1	94	77.730	ENSMAUG00000010516	Urb1	100	77.874	Mesocricetus_auratus
ENSCLAG00000005262	URB1	99	80.554	ENSMICG00000016424	URB1	99	80.554	Microcebus_murinus
ENSCLAG00000005262	URB1	99	74.857	ENSMOCG00000012613	Urb1	99	74.857	Microtus_ochrogaster
ENSCLAG00000005262	URB1	99	62.057	ENSMODG00000021076	URB1	100	62.057	Monodelphis_domestica
ENSCLAG00000005262	URB1	99	42.743	ENSMALG00000017411	urb1	99	51.852	Monopterus_albus
ENSCLAG00000005262	URB1	99	75.660	MGP_CAROLIEiJ_G0020948	Urb1	99	75.660	Mus_caroli
ENSCLAG00000005262	URB1	99	76.012	ENSMUSG00000039929	Urb1	99	76.012	Mus_musculus
ENSCLAG00000005262	URB1	99	75.528	MGP_PahariEiJ_G0016653	Urb1	99	75.528	Mus_pahari
ENSCLAG00000005262	URB1	99	75.914	MGP_SPRETEiJ_G0021854	Urb1	99	75.914	Mus_spretus
ENSCLAG00000005262	URB1	100	77.729	ENSMPUG00000001123	URB1	100	77.729	Mustela_putorius_furo
ENSCLAG00000005262	URB1	99	77.004	ENSNGAG00000001905	Urb1	99	77.004	Nannospalax_galili
ENSCLAG00000005262	URB1	82	45.517	ENSNBRG00000001049	urb1	99	45.554	Neolamprologus_brichardi
ENSCLAG00000005262	URB1	99	79.479	ENSNLEG00000026872	URB1	100	79.385	Nomascus_leucogenys
ENSCLAG00000005262	URB1	93	63.567	ENSMEUG00000010828	URB1	96	57.518	Notamacropus_eugenii
ENSCLAG00000005262	URB1	99	72.755	ENSOPRG00000013482	URB1	100	72.755	Ochotona_princeps
ENSCLAG00000005262	URB1	100	87.274	ENSODEG00000002587	URB1	99	87.274	Octodon_degus
ENSCLAG00000005262	URB1	99	45.216	ENSONIG00000005599	urb1	100	45.216	Oreochromis_niloticus
ENSCLAG00000005262	URB1	99	78.871	ENSOCUG00000009381	URB1	99	78.871	Oryctolagus_cuniculus
ENSCLAG00000005262	URB1	99	44.372	ENSORLG00000003429	urb1	99	44.391	Oryzias_latipes
ENSCLAG00000005262	URB1	99	44.449	ENSORLG00020013785	urb1	99	44.425	Oryzias_latipes_hni
ENSCLAG00000005262	URB1	92	50.279	ENSORLG00015019421	urb1	97	50.279	Oryzias_latipes_hsok
ENSCLAG00000005262	URB1	81	49.719	ENSOMEG00000002094	urb1	98	49.719	Oryzias_melastigma
ENSCLAG00000005262	URB1	99	79.974	ENSOGAG00000017140	URB1	99	79.974	Otolemur_garnettii
ENSCLAG00000005262	URB1	97	75.339	ENSOARG00000013679	URB1	99	75.169	Ovis_aries
ENSCLAG00000005262	URB1	100	81.363	ENSPPAG00000003423	URB1	100	81.363	Pan_paniscus
ENSCLAG00000005262	URB1	99	78.590	ENSPPRG00000023131	URB1	99	78.590	Panthera_pardus
ENSCLAG00000005262	URB1	92	77.515	ENSPTIG00000016125	URB1	97	77.442	Panthera_tigris_altaica
ENSCLAG00000005262	URB1	100	81.231	ENSPTRG00000013852	URB1	100	81.231	Pan_troglodytes
ENSCLAG00000005262	URB1	100	80.923	ENSPANG00000021964	URB1	100	80.923	Papio_anubis
ENSCLAG00000005262	URB1	99	46.960	ENSPKIG00000003683	urb1	98	47.004	Paramormyrops_kingsleyae
ENSCLAG00000005262	URB1	99	76.323	ENSPEMG00000021205	Urb1	99	76.323	Peromyscus_maniculatus_bairdii
ENSCLAG00000005262	URB1	69	35.417	ENSPMAG00000009733	URB1	99	33.785	Petromyzon_marinus
ENSCLAG00000005262	URB1	99	62.101	ENSPCIG00000016350	URB1	100	62.101	Phascolarctos_cinereus
ENSCLAG00000005262	URB1	96	43.793	ENSPLAG00000004371	urb1	99	43.793	Poecilia_latipinna
ENSCLAG00000005262	URB1	98	44.237	ENSPMEG00000006634	urb1	98	44.237	Poecilia_mexicana
ENSCLAG00000005262	URB1	98	44.484	ENSPREG00000013453	urb1	98	44.484	Poecilia_reticulata
ENSCLAG00000005262	URB1	99	80.936	ENSPPYG00000011359	URB1	100	80.835	Pongo_abelii
ENSCLAG00000005262	URB1	99	66.402	ENSPCAG00000007430	URB1	99	66.402	Procavia_capensis
ENSCLAG00000005262	URB1	100	80.959	ENSPCOG00000022695	URB1	100	80.959	Propithecus_coquereli
ENSCLAG00000005262	URB1	100	76.440	ENSPVAG00000000889	URB1	100	76.440	Pteropus_vampyrus
ENSCLAG00000005262	URB1	99	44.028	ENSPNYG00000010589	urb1	100	43.617	Pundamilia_nyererei
ENSCLAG00000005262	URB1	99	40.361	ENSPNAG00000019324	urb1	99	40.317	Pygocentrus_nattereri
ENSCLAG00000005262	URB1	99	75.385	ENSRNOG00000002080	Urb1	99	75.473	Rattus_norvegicus
ENSCLAG00000005262	URB1	100	80.316	ENSRBIG00000033122	URB1	100	80.316	Rhinopithecus_bieti
ENSCLAG00000005262	URB1	100	80.404	ENSRROG00000040237	URB1	100	80.404	Rhinopithecus_roxellana
ENSCLAG00000005262	URB1	100	80.492	ENSSBOG00000027672	URB1	100	80.492	Saimiri_boliviensis_boliviensis
ENSCLAG00000005262	URB1	99	61.828	ENSSHAG00000005140	URB1	100	61.828	Sarcophilus_harrisii
ENSCLAG00000005262	URB1	93	46.183	ENSSFOG00015000339	urb1	99	46.132	Scleropages_formosus
ENSCLAG00000005262	URB1	99	44.178	ENSSMAG00000003782	urb1	99	44.682	Scophthalmus_maximus
ENSCLAG00000005262	URB1	99	45.557	ENSSDUG00000012313	urb1	99	45.466	Seriola_dumerili
ENSCLAG00000005262	URB1	99	45.510	ENSSLDG00000023179	urb1	99	45.419	Seriola_lalandi_dorsalis
ENSCLAG00000005262	URB1	99	54.395	ENSSPUG00000012447	URB1	99	54.395	Sphenodon_punctatus
ENSCLAG00000005262	URB1	99	44.913	ENSSPAG00000006325	urb1	99	45.000	Stegastes_partitus
ENSCLAG00000005262	URB1	100	76.791	ENSSSCG00000032024	URB1	100	76.703	Sus_scrofa
ENSCLAG00000005262	URB1	74	57.458	ENSTGUG00000013442	URB1	100	57.458	Taeniopygia_guttata
ENSCLAG00000005262	URB1	99	44.061	ENSTRUG00000009372	urb1	99	44.061	Takifugu_rubripes
ENSCLAG00000005262	URB1	99	43.761	ENSTNIG00000016277	urb1	100	43.761	Tetraodon_nigroviridis
ENSCLAG00000005262	URB1	81	81.214	ENSTBEG00000010044	URB1	81	81.214	Tupaia_belangeri
ENSCLAG00000005262	URB1	90	77.871	ENSTTRG00000007712	URB1	92	78.079	Tursiops_truncatus
ENSCLAG00000005262	URB1	100	78.198	ENSUAMG00000012231	URB1	99	78.198	Ursus_americanus
ENSCLAG00000005262	URB1	87	85.593	ENSUMAG00000017419	URB1	97	85.662	Ursus_maritimus
ENSCLAG00000005262	URB1	68	88.435	ENSVPAG00000001164	URB1	68	88.435	Vicugna_pacos
ENSCLAG00000005262	URB1	100	77.426	ENSVVUG00000000551	URB1	100	77.426	Vulpes_vulpes
ENSCLAG00000005262	URB1	99	49.763	ENSXETG00000009895	urb1	100	49.763	Xenopus_tropicalis
ENSCLAG00000005262	URB1	94	47.619	ENSXCOG00000005500	urb1	98	47.619	Xiphophorus_couchianus
ENSCLAG00000005262	URB1	97	48.148	ENSXMAG00000007253	urb1	98	48.148	Xiphophorus_maculatus