EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCLAG00000005298 (Gene tree)
Gene ID
102014093
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Chinchilla_lanigera
Status
putative
Strand
Minus strand
Length
27821 bases
Position
chrJH721905.1:12422204-12450024
Accession
102014093
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCLAP00000007548PABPPF00658.188.4e-2711
ENSCLAP00000007548RRM_5PF13893.63.8e-1312
ENSCLAP00000007548RRM_5PF13893.63.8e-1322
ENSCLAP00000007548RRM_1PF00076.222.2e-8714
ENSCLAP00000007548RRM_1PF00076.222.2e-8724
ENSCLAP00000007548RRM_1PF00076.222.2e-8734
ENSCLAP00000007548RRM_1PF00076.222.2e-8744
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCLAT00000007665PABPC1L-2015933XM_005392456ENSCLAP00000007548618 (aa)XP_005392513UPI00038EDDCB
Gene Model
Click here to download ENSCLAG00000005298's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005298's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCLAG00000005298PABPC1L5968.528ENSCLAG00000017409-9968.528
ENSCLAG00000005298PABPC1L5036.047ENSCLAG00000008344CELF46432.800
ENSCLAG00000005298PABPC1L5968.528ENSCLAG00000017412-9968.528
ENSCLAG00000005298PABPC1L5035.294ENSCLAG00000000586CELF37534.343
ENSCLAG00000005298PABPC1L9964.469ENSCLAG00000011899PABPC49762.639
ENSCLAG00000005298PABPC1L9865.897ENSCLAG00000009676PABPC19765.719
ENSCLAG00000005298PABPC1L5933.333ENSCLAG00000015851SF3B45833.880
ENSCLAG00000005298PABPC1L6233.735ENSCLAG00000003388ELAVL28933.735
ENSCLAG00000005298PABPC1L6159.270ENSCLAG00000000647PABPC59559.167
ENSCLAG00000005298PABPC1L5936.047ENSCLAG00000010311CELF26136.047
ENSCLAG00000005298PABPC1L6160.606ENSCLAG00000017628PABPC4L9860.606
ENSCLAG00000005298PABPC1L5333.058ENSCLAG00000011791CELF17433.058
ENSCLAG00000005298PABPC1L5630.409ENSCLAG00000001273TIAL17930.409
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCLAG00000005298PABPC1L10083.065ENSG00000101104PABPC1L9988.272Homo_sapiens
ENSCLAG00000005298PABPC1L9863.446ENSAPOG00000010842pabpc1l9862.600Acanthochromis_polyacanthus
ENSCLAG00000005298PABPC1L9971.145ENSAMEG00000004099PABPC1L10071.799Ailuropoda_melanoleuca
ENSCLAG00000005298PABPC1L9964.506ENSACIG00000021004-9971.429Amphilophus_citrinellus
ENSCLAG00000005298PABPC1L9963.434ENSAOCG00000006167-9962.957Amphiprion_ocellaris
ENSCLAG00000005298PABPC1L9964.992ENSAPEG00000010558-9974.118Amphiprion_percula
ENSCLAG00000005298PABPC1L9965.478ENSATEG00000007428pabpc1l9964.830Anabas_testudineus
ENSCLAG00000005298PABPC1L9871.567ENSAPLG00000008415PABPC1L9871.498Anas_platyrhynchos
ENSCLAG00000005298PABPC1L9970.240ENSACAG00000011841PABPC1L9870.240Anolis_carolinensis
ENSCLAG00000005298PABPC1L10081.129ENSANAG00000026826PABPC1L10079.839Aotus_nancymaae
ENSCLAG00000005298PABPC1L9963.854ENSACLG00000024791pabpc1l9963.376Astatotilapia_calliptera
ENSCLAG00000005298PABPC1L9966.720ENSAMXG00000013552pabpc1l9966.083Astyanax_mexicanus
ENSCLAG00000005298PABPC1L5591.667ENSBTAG00000055300-10091.667Bos_taurus
ENSCLAG00000005298PABPC1L6772.125ENSBTAG00000016849PABPC1L7380.417Bos_taurus
ENSCLAG00000005298PABPC1L5973.563ENSCJAG00000038506-10073.563Callithrix_jacchus
ENSCLAG00000005298PABPC1L10081.290ENSCJAG00000017628PABPC1L10080.000Callithrix_jacchus
ENSCLAG00000005298PABPC1L9973.023ENSCAFG00000009573PABPC1L10072.868Canis_familiaris
ENSCLAG00000005298PABPC1L9981.626ENSCAFG00020013828PABPC1L9981.626Canis_lupus_dingo
ENSCLAG00000005298PABPC1L9779.967ENSCHIG00000025759PABPC1L9179.636Capra_hircus
ENSCLAG00000005298PABPC1L10080.806ENSTSYG00000006645PABPC1L10080.806Carlito_syrichta
ENSCLAG00000005298PABPC1L9990.146ENSCAPG00000014519PABPC1L10089.964Cavia_aperea
ENSCLAG00000005298PABPC1L10093.204ENSCPOG00000013633PABPC1L10093.204Cavia_porcellus
ENSCLAG00000005298PABPC1L10080.645ENSCCAG00000023338PABPC1L10080.645Cebus_capucinus
ENSCLAG00000005298PABPC1L10082.903ENSCATG00000034065PABPC1L10081.613Cercocebus_atys
ENSCLAG00000005298PABPC1L10083.065ENSCSAG00000014242PABPC1L10081.774Chlorocebus_sabaeus
ENSCLAG00000005298PABPC1L7278.733ENSCPBG00000017755-9978.733Chrysemys_picta_bellii
ENSCLAG00000005298PABPC1L5378.030ENSCPBG00000007810-8378.030Chrysemys_picta_bellii
ENSCLAG00000005298PABPC1L9847.515ENSCING00000002796-9747.695Ciona_intestinalis
ENSCLAG00000005298PABPC1L9754.950ENSCSAVG00000003102-10079.452Ciona_savignyi
ENSCLAG00000005298PABPC1L9758.194ENSCSAVG00000004246-8278.313Ciona_savignyi
ENSCLAG00000005298PABPC1L10078.060ENSCANG00000037530PABPC1L10076.789Colobus_angolensis_palliatus
ENSCLAG00000005298PABPC1L9977.310ENSCGRG00001021938Pabpc1l9976.499Cricetulus_griseus_chok1gshd
ENSCLAG00000005298PABPC1L9977.310ENSCGRG00000007946Pabpc1l9976.499Cricetulus_griseus_crigri
ENSCLAG00000005298PABPC1L9961.983ENSCSEG00000021295pabpc1l9862.046Cynoglossus_semilaevis
ENSCLAG00000005298PABPC1L9966.395ENSCVAG00000015943-8680.153Cyprinodon_variegatus
ENSCLAG00000005298PABPC1L9967.093ENSDARG00000002597pabpc1l8882.308Danio_rerio
ENSCLAG00000005298PABPC1L9982.068ENSDNOG00000048450PABPC1L9981.260Dasypus_novemcinctus
ENSCLAG00000005298PABPC1L9983.819ENSDORG00000001067Pabpc1l9982.686Dipodomys_ordii
ENSCLAG00000005298PABPC1L9684.959ENSETEG00000009969PABPC1L7284.959Echinops_telfairi
ENSCLAG00000005298PABPC1L5578.610ENSEASG00005023407-6486.709Equus_asinus_asinus
ENSCLAG00000005298PABPC1L5591.667ENSEASG00005023408-10091.667Equus_asinus_asinus
ENSCLAG00000005298PABPC1L6780.769ENSECAG00000040139-8379.487Equus_caballus
ENSCLAG00000005298PABPC1L10078.065ENSEEUG00000005978PABPC1L10076.935Erinaceus_europaeus
ENSCLAG00000005298PABPC1L9967.302ENSELUG00000001811pabpc1l9967.143Esox_lucius
ENSCLAG00000005298PABPC1L9982.305ENSFCAG00000011692PABPC1L9982.305Felis_catus
ENSCLAG00000005298PABPC1L8274.059ENSFALG00000005372PABPC1L8574.059Ficedula_albicollis
ENSCLAG00000005298PABPC1L10088.511ENSFDAG00000008291PABPC1L10088.188Fukomys_damarensis
ENSCLAG00000005298PABPC1L9965.590ENSFHEG00000003398pabpc1l9964.620Fundulus_heteroclitus
ENSCLAG00000005298PABPC1L9966.129ENSGMOG00000004437pabpc1l9865.484Gadus_morhua
ENSCLAG00000005298PABPC1L9866.441ENSGALG00000004123PABPC1L9882.955Gallus_gallus
ENSCLAG00000005298PABPC1L9962.021ENSGAFG00000021057pabpc1l9961.409Gambusia_affinis
ENSCLAG00000005298PABPC1L9963.462ENSGACG00000002792pabpc1l9962.600Gasterosteus_aculeatus
ENSCLAG00000005298PABPC1L9972.568ENSGAGG00000000589PABPC1L9084.091Gopherus_agassizii
ENSCLAG00000005298PABPC1L10083.226ENSGGOG00000004584PABPC1L10082.097Gorilla_gorilla
ENSCLAG00000005298PABPC1L9963.694ENSHBUG00000006134pabpc1l9963.116Haplochromis_burtoni
ENSCLAG00000005298PABPC1L10092.892ENSHGLG00000008434PABPC1L10092.892Heterocephalus_glaber_female
ENSCLAG00000005298PABPC1L5877.528ENSHGLG00100019506-10077.528Heterocephalus_glaber_male
ENSCLAG00000005298PABPC1L10092.892ENSHGLG00100012151PABPC1L10092.892Heterocephalus_glaber_male
ENSCLAG00000005298PABPC1L9963.711ENSHCOG00000009270pabpc1l9963.667Hippocampus_comes
ENSCLAG00000005298PABPC1L5166.116ENSIPUG00000005537-9866.116Ictalurus_punctatus
ENSCLAG00000005298PABPC1L5959.195ENSIPUG00000006780-8559.195Ictalurus_punctatus
ENSCLAG00000005298PABPC1L9967.675ENSIPUG00000012602pabpc1l9967.038Ictalurus_punctatus
ENSCLAG00000005298PABPC1L5958.621ENSIPUG00000006760-8858.621Ictalurus_punctatus
ENSCLAG00000005298PABPC1L10083.871ENSSTOG00000003739PABPC1L10082.742Ictidomys_tridecemlineatus
ENSCLAG00000005298PABPC1L9969.328ENSJJAG00000022406Pabpc1l9966.830Jaculus_jaculus
ENSCLAG00000005298PABPC1L9965.434ENSKMAG00000016847pabpc1l9964.952Kryptolebias_marmoratus
ENSCLAG00000005298PABPC1L9863.333ENSLBEG00000010084pabpc1l9962.561Labrus_bergylta
ENSCLAG00000005298PABPC1L9966.719ENSLACG00000005762PABPC1L9967.582Latimeria_chalumnae
ENSCLAG00000005298PABPC1L9968.211ENSLOCG00000007519pabpc1l9867.252Lepisosteus_oculatus
ENSCLAG00000005298PABPC1L9979.840ENSLAFG00000003553PABPC1L10078.880Loxodonta_africana
ENSCLAG00000005298PABPC1L10082.903ENSMFAG00000040365PABPC1L10081.613Macaca_fascicularis
ENSCLAG00000005298PABPC1L10080.417ENSMNEG00000032298PABPC1L10079.133Macaca_nemestrina
ENSCLAG00000005298PABPC1L10082.903ENSMLEG00000043139PABPC1L10081.613Mandrillus_leucophaeus
ENSCLAG00000005298PABPC1L9764.368ENSMAMG00000011854pabpc1l9763.711Mastacembelus_armatus
ENSCLAG00000005298PABPC1L9963.854ENSMZEG00005023713pabpc1l9963.376Maylandia_zebra
ENSCLAG00000005298PABPC1L9972.596ENSMGAG00000003674PABPC1L9872.364Meleagris_gallopavo
ENSCLAG00000005298PABPC1L9975.487ENSMOCG00000013186Pabpc1l9974.675Microtus_ochrogaster
ENSCLAG00000005298PABPC1L9964.366ENSMMOG00000020574-9080.769Mola_mola
ENSCLAG00000005298PABPC1L9473.720ENSMODG00000016198PABPC1L9973.090Monodelphis_domestica
ENSCLAG00000005298PABPC1L9762.193ENSMALG00000021622pabpc1l10061.538Monopterus_albus
ENSCLAG00000005298PABPC1L9976.998MGP_CAROLIEiJ_G0024627Pabpc1l9976.998Mus_caroli
ENSCLAG00000005298PABPC1L9976.672ENSMUSG00000054582Pabpc1l9976.672Mus_musculus
ENSCLAG00000005298PABPC1L9977.199MGP_PahariEiJ_G0026071Pabpc1l9977.199Mus_pahari
ENSCLAG00000005298PABPC1L9976.835MGP_SPRETEiJ_G0025549Pabpc1l9976.835Mus_spretus
ENSCLAG00000005298PABPC1L9980.064ENSMPUG00000017646PABPC1L9980.064Mustela_putorius_furo
ENSCLAG00000005298PABPC1L9875.523ENSMLUG00000006324PABPC1L9775.523Myotis_lucifugus
ENSCLAG00000005298PABPC1L9979.773ENSNGAG00000010458Pabpc1l9978.641Nannospalax_galili
ENSCLAG00000005298PABPC1L9963.680ENSNBRG00000016633pabpc1l9971.429Neolamprologus_brichardi
ENSCLAG00000005298PABPC1L10064.194ENSMEUG00000007905-10064.194Notamacropus_eugenii
ENSCLAG00000005298PABPC1L10081.320ENSOPRG00000011846PABPC1L10080.193Ochotona_princeps
ENSCLAG00000005298PABPC1L10082.524ENSODEG00000015482PABPC1L10082.039Octodon_degus
ENSCLAG00000005298PABPC1L5771.250ENSODEG00000002920-9771.250Octodon_degus
ENSCLAG00000005298PABPC1L9963.854ENSONIG00000017314pabpc1l9963.694Oreochromis_niloticus
ENSCLAG00000005298PABPC1L8964.937ENSOANG00000015793-10064.937Ornithorhynchus_anatinus
ENSCLAG00000005298PABPC1L9975.076ENSOCUG00000003005PABPC1L10074.091Oryctolagus_cuniculus
ENSCLAG00000005298PABPC1L9870.264ENSORLG00000010322pabpc1l9970.024Oryzias_latipes
ENSCLAG00000005298PABPC1L9870.264ENSORLG00020021193pabpc1l9970.024Oryzias_latipes_hni
ENSCLAG00000005298PABPC1L9870.264ENSORLG00015017018pabpc1l9970.024Oryzias_latipes_hsok
ENSCLAG00000005298PABPC1L9961.246ENSOMEG00000010789pabpc1l9960.334Oryzias_melastigma
ENSCLAG00000005298PABPC1L9980.159ENSOGAG00000032999PABPC1L10079.048Otolemur_garnettii
ENSCLAG00000005298PABPC1L9981.107ENSOARG00000004578PABPC1L9980.782Ovis_aries
ENSCLAG00000005298PABPC1L10082.903ENSPPAG00000039677PABPC1L10081.774Pan_paniscus
ENSCLAG00000005298PABPC1L6276.543ENSPPRG00000019327-9876.543Panthera_pardus
ENSCLAG00000005298PABPC1L9982.623ENSPTIG00000006524PABPC1L9982.787Panthera_tigris_altaica
ENSCLAG00000005298PABPC1L6287.963ENSPTRG00000013531PABPC1L9987.963Pan_troglodytes
ENSCLAG00000005298PABPC1L10082.903ENSPANG00000018788PABPC1L10081.613Papio_anubis
ENSCLAG00000005298PABPC1L9967.840ENSPKIG00000007322pabpc1l9967.200Paramormyrops_kingsleyae
ENSCLAG00000005298PABPC1L5377.692ENSPKIG00000016810-9377.692Paramormyrops_kingsleyae
ENSCLAG00000005298PABPC1L6779.376ENSPSIG00000013289PABPC1L9779.902Pelodiscus_sinensis
ENSCLAG00000005298PABPC1L7163.819ENSPMGG00000023121-9261.929Periophthalmus_magnuspinnatus
ENSCLAG00000005298PABPC1L6173.023ENSPMGG00000023117pabpc1l9279.545Periophthalmus_magnuspinnatus
ENSCLAG00000005298PABPC1L9976.998ENSPEMG00000020671Pabpc1l9976.020Peromyscus_maniculatus_bairdii
ENSCLAG00000005298PABPC1L9966.124ENSPFOG00000013241pabpc1l9964.734Poecilia_formosa
ENSCLAG00000005298PABPC1L9965.378ENSPLAG00000017490-9964.216Poecilia_latipinna
ENSCLAG00000005298PABPC1L5380.916ENSPLAG00000023686-9280.916Poecilia_latipinna
ENSCLAG00000005298PABPC1L5380.916ENSPMEG00000009185-8980.916Poecilia_mexicana
ENSCLAG00000005298PABPC1L9965.217ENSPMEG00000007677pabpc1l9964.573Poecilia_mexicana
ENSCLAG00000005298PABPC1L6773.123ENSPREG00000015886pabpc1l9973.645Poecilia_reticulata
ENSCLAG00000005298PABPC1L10083.065ENSPPYG00000011042PABPC1L10081.774Pongo_abelii
ENSCLAG00000005298PABPC1L6182.812ENSPCAG00000011787-7482.812Procavia_capensis
ENSCLAG00000005298PABPC1L9981.892ENSPCOG00000020630PABPC1L9980.587Propithecus_coquereli
ENSCLAG00000005298PABPC1L9978.734ENSPVAG00000012663PABPC1L9978.734Pteropus_vampyrus
ENSCLAG00000005298PABPC1L9962.806ENSPNYG00000004101pabpc1l9971.429Pundamilia_nyererei
ENSCLAG00000005298PABPC1L9960.925ENSPNAG00000021248pabpc1l9960.766Pygocentrus_nattereri
ENSCLAG00000005298PABPC1L9976.737ENSRNOG00000012750Pabpc1l10076.737Rattus_norvegicus
ENSCLAG00000005298PABPC1L10082.903ENSRBIG00000035381PABPC1L10081.613Rhinopithecus_bieti
ENSCLAG00000005298PABPC1L10082.581ENSRROG00000044498PABPC1L10081.290Rhinopithecus_roxellana
ENSCLAG00000005298PABPC1L10080.645ENSSBOG00000009532-10079.355Saimiri_boliviensis_boliviensis
ENSCLAG00000005298PABPC1L9869.371ENSSHAG00000011446PABPC1L10069.371Sarcophilus_harrisii
ENSCLAG00000005298PABPC1L9968.254ENSSFOG00015017304pabpc1l9967.460Scleropages_formosus
ENSCLAG00000005298PABPC1L9963.477ENSSMAG00000010516pabpc1l9880.620Scophthalmus_maximus
ENSCLAG00000005298PABPC1L9964.331ENSSDUG00000014743pabpc1l9963.376Seriola_dumerili
ENSCLAG00000005298PABPC1L9664.073ENSSLDG00000006981pabpc1l9572.603Seriola_lalandi_dorsalis
ENSCLAG00000005298PABPC1L9969.952ENSSPUG00000004233PABPC1L9869.952Sphenodon_punctatus
ENSCLAG00000005298PABPC1L9962.726ENSSPAG00000017137pabpc1l9961.741Stegastes_partitus
ENSCLAG00000005298PABPC1L9979.805ENSSSCG00000007382PABPC1L9979.967Sus_scrofa
ENSCLAG00000005298PABPC1L9969.797ENSTGUG00000005114PABPC1L9969.953Taeniopygia_guttata
ENSCLAG00000005298PABPC1L9764.169ENSTRUG00000011085pabpc1l9763.005Takifugu_rubripes
ENSCLAG00000005298PABPC1L9962.162ENSTNIG00000017903pabpc1l9860.726Tetraodon_nigroviridis
ENSCLAG00000005298PABPC1L9487.329ENSTBEG00000002851PABPC1L7987.329Tupaia_belangeri
ENSCLAG00000005298PABPC1L9478.694ENSTTRG00000007618PABPC1L10078.595Tursiops_truncatus
ENSCLAG00000005298PABPC1L9980.196ENSUAMG00000017682PABPC1L9980.196Ursus_americanus
ENSCLAG00000005298PABPC1L6886.957ENSUMAG00000025436PABPC1L9089.143Ursus_maritimus
ENSCLAG00000005298PABPC1L9988.538ENSVVUG00000018939PABPC1L9988.538Vulpes_vulpes
ENSCLAG00000005298PABPC1L9966.986ENSXETG00000022831pabpc1l9866.029Xenopus_tropicalis
ENSCLAG00000005298PABPC1L9964.115ENSXCOG00000005459pabpc1l9977.305Xiphophorus_couchianus
ENSCLAG00000005298PABPC1L9965.217ENSXMAG00000017135pabpc1l9964.573Xiphophorus_maculatus

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