EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005335 (Gene tree)
Gene ID: 102024699
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 7452 bases
Position: chrJH721956.1:475579-483030
Accession: 102024699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007600	Gar1	PF04410.14	1.8e-38	1	1
ENSCLAP00000007601	Gar1	PF04410.14	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007719	GAR1-202	243	-	ENSCLAP00000007601	80 (aa)	-	-
ENSCLAT00000007718	GAR1-201	1727	XM_005406186	ENSCLAP00000007600	215 (aa)	XP_005406243	UPI00038F051F

Gene Model

Click here to download ENSCLAG00000005335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005335's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005335	GAR1	99	94.937	ENSG00000109534	GAR1	51	97.273	Homo_sapiens
ENSCLAG00000005335	GAR1	69	96.364	ENSAPOG00000019754	gar1	52	91.818	Acanthochromis_polyacanthus
ENSCLAG00000005335	GAR1	96	94.937	ENSAMEG00000004605	GAR1	54	96.364	Ailuropoda_melanoleuca
ENSCLAG00000005335	GAR1	69	96.364	ENSAOCG00000020947	gar1	51	91.818	Amphiprion_ocellaris
ENSCLAG00000005335	GAR1	69	96.364	ENSAPEG00000001676	gar1	51	91.818	Amphiprion_percula
ENSCLAG00000005335	GAR1	69	96.364	ENSATEG00000003733	gar1	51	91.818	Anabas_testudineus
ENSCLAG00000005335	GAR1	75	91.667	ENSAPLG00000010926	GAR1	60	87.037	Anas_platyrhynchos
ENSCLAG00000005335	GAR1	69	92.727	ENSACAG00000010031	GAR1	51	89.815	Anolis_carolinensis
ENSCLAG00000005335	GAR1	99	94.937	ENSANAG00000021608	GAR1	50	97.273	Aotus_nancymaae
ENSCLAG00000005335	GAR1	96	91.358	ENSBTAG00000000748	GAR1	52	98.182	Bos_taurus
ENSCLAG00000005335	GAR1	99	94.937	ENSCJAG00000004041	GAR1	50	97.273	Callithrix_jacchus
ENSCLAG00000005335	GAR1	96	96.104	ENSCAFG00020015566	GAR1	57	97.273	Canis_lupus_dingo
ENSCLAG00000005335	GAR1	96	91.358	ENSCHIG00000016026	-	53	98.182	Capra_hircus
ENSCLAG00000005335	GAR1	51	95.122	ENSCHIG00000011049	-	55	85.455	Capra_hircus
ENSCLAG00000005335	GAR1	99	94.937	ENSTSYG00000013668	-	52	97.273	Carlito_syrichta
ENSCLAG00000005335	GAR1	69	87.273	ENSTSYG00000026632	-	56	89.091	Carlito_syrichta
ENSCLAG00000005335	GAR1	100	96.250	ENSCAPG00000014977	-	100	96.250	Cavia_aperea
ENSCLAG00000005335	GAR1	99	96.203	ENSCPOG00000004216	GAR1	100	94.977	Cavia_porcellus
ENSCLAG00000005335	GAR1	99	94.937	ENSCCAG00000029372	GAR1	50	97.273	Cebus_capucinus
ENSCLAG00000005335	GAR1	99	94.937	ENSCATG00000021854	GAR1	61	97.521	Cercocebus_atys
ENSCLAG00000005335	GAR1	96	96.104	ENSCSAG00000003922	GAR1	61	97.521	Chlorocebus_sabaeus
ENSCLAG00000005335	GAR1	99	94.937	ENSCHOG00000007484	-	51	94.118	Choloepus_hoffmanni
ENSCLAG00000005335	GAR1	69	94.545	ENSCPBG00000004310	GAR1	56	90.000	Chrysemys_picta_bellii
ENSCLAG00000005335	GAR1	69	96.364	ENSCANG00000039262	GAR1	51	96.364	Colobus_angolensis_palliatus
ENSCLAG00000005335	GAR1	69	96.364	ENSCGRG00001003919	Gar1	50	93.636	Cricetulus_griseus_chok1gshd
ENSCLAG00000005335	GAR1	69	96.364	ENSCGRG00000010165	-	72	95.652	Cricetulus_griseus_crigri
ENSCLAG00000005335	GAR1	69	94.545	ENSCSEG00000003525	gar1	50	90.909	Cynoglossus_semilaevis
ENSCLAG00000005335	GAR1	69	94.545	ENSCVAG00000002103	gar1	53	90.909	Cyprinodon_variegatus
ENSCLAG00000005335	GAR1	99	93.671	ENSDNOG00000037632	GAR1	56	96.364	Dasypus_novemcinctus
ENSCLAG00000005335	GAR1	69	96.364	ENSDORG00000000482	Gar1	51	94.545	Dipodomys_ordii
ENSCLAG00000005335	GAR1	69	98.182	ENSEASG00005004658	GAR1	51	96.364	Equus_asinus_asinus
ENSCLAG00000005335	GAR1	96	96.104	ENSECAG00000013624	GAR1	56	97.273	Equus_caballus
ENSCLAG00000005335	GAR1	69	98.182	ENSFCAG00000040791	-	53	97.273	Felis_catus
ENSCLAG00000005335	GAR1	68	55.782	ENSFCAG00000025841	-	57	63.025	Felis_catus
ENSCLAG00000005335	GAR1	75	93.333	ENSFALG00000006445	GAR1	50	89.815	Ficedula_albicollis
ENSCLAG00000005335	GAR1	100	97.500	ENSFDAG00000006333	-	100	97.500	Fukomys_damarensis
ENSCLAG00000005335	GAR1	69	92.727	ENSFHEG00000008068	gar1	51	90.000	Fundulus_heteroclitus
ENSCLAG00000005335	GAR1	69	90.909	ENSGMOG00000012419	gar1	67	77.483	Gadus_morhua
ENSCLAG00000005335	GAR1	69	94.545	ENSGAFG00000016833	gar1	65	80.263	Gambusia_affinis
ENSCLAG00000005335	GAR1	66	96.226	ENSGAGG00000004393	GAR1	56	89.908	Gopherus_agassizii
ENSCLAG00000005335	GAR1	99	94.937	ENSGGOG00000008681	GAR1	51	96.364	Gorilla_gorilla
ENSCLAG00000005335	GAR1	69	76.364	ENSGGOG00000036205	-	54	79.817	Gorilla_gorilla
ENSCLAG00000005335	GAR1	69	96.364	ENSHBUG00000023860	gar1	51	93.000	Haplochromis_burtoni
ENSCLAG00000005335	GAR1	69	98.182	ENSHGLG00000000493	GAR1	72	98.182	Heterocephalus_glaber_female
ENSCLAG00000005335	GAR1	65	98.077	ENSHGLG00100016873	-	72	98.182	Heterocephalus_glaber_male
ENSCLAG00000005335	GAR1	69	94.545	ENSIPUG00000003194	gar1	52	89.091	Ictalurus_punctatus
ENSCLAG00000005335	GAR1	69	94.545	ENSSTOG00000005577	GAR1	71	94.545	Ictidomys_tridecemlineatus
ENSCLAG00000005335	GAR1	69	94.545	ENSKMAG00000010402	gar1	52	89.091	Kryptolebias_marmoratus
ENSCLAG00000005335	GAR1	69	90.909	ENSLACG00000003306	GAR1	65	86.111	Latimeria_chalumnae
ENSCLAG00000005335	GAR1	99	94.937	ENSMFAG00000024592	GAR1	51	97.273	Macaca_fascicularis
ENSCLAG00000005335	GAR1	71	78.947	ENSMFAG00000003572	-	54	80.909	Macaca_fascicularis
ENSCLAG00000005335	GAR1	99	94.937	ENSMMUG00000021225	GAR1	51	97.273	Macaca_mulatta
ENSCLAG00000005335	GAR1	99	94.937	ENSMNEG00000042594	GAR1	51	97.273	Macaca_nemestrina
ENSCLAG00000005335	GAR1	99	94.937	ENSMLEG00000002496	GAR1	50	97.273	Mandrillus_leucophaeus
ENSCLAG00000005335	GAR1	100	95.000	ENSMAUG00000016788	Gar1	100	95.000	Mesocricetus_auratus
ENSCLAG00000005335	GAR1	69	96.364	ENSMICG00000003326	GAR1	51	96.364	Microcebus_murinus
ENSCLAG00000005335	GAR1	100	96.250	ENSMOCG00000001340	Gar1	100	96.250	Microtus_ochrogaster
ENSCLAG00000005335	GAR1	69	96.364	ENSMMOG00000004156	gar1	52	94.393	Mola_mola
ENSCLAG00000005335	GAR1	69	94.545	ENSMALG00000009672	gar1	50	91.589	Monopterus_albus
ENSCLAG00000005335	GAR1	100	96.250	MGP_CAROLIEiJ_G0025627	Gar1	100	96.250	Mus_caroli
ENSCLAG00000005335	GAR1	100	96.250	ENSMUSG00000028010	Gar1	100	96.250	Mus_musculus
ENSCLAG00000005335	GAR1	100	96.250	MGP_PahariEiJ_G0027076	Gar1	100	96.250	Mus_pahari
ENSCLAG00000005335	GAR1	100	96.250	MGP_SPRETEiJ_G0026580	Gar1	100	96.250	Mus_spretus
ENSCLAG00000005335	GAR1	69	98.182	ENSMPUG00000008615	GAR1	53	97.273	Mustela_putorius_furo
ENSCLAG00000005335	GAR1	99	94.937	ENSMLUG00000003776	GAR1	77	87.283	Myotis_lucifugus
ENSCLAG00000005335	GAR1	69	96.364	ENSNGAG00000008268	Gar1	99	94.805	Nannospalax_galili
ENSCLAG00000005335	GAR1	99	94.937	ENSNLEG00000016578	GAR1	51	97.273	Nomascus_leucogenys
ENSCLAG00000005335	GAR1	71	77.193	ENSNLEG00000034282	-	56	81.818	Nomascus_leucogenys
ENSCLAG00000005335	GAR1	99	97.468	ENSODEG00000011083	GAR1	57	96.364	Octodon_degus
ENSCLAG00000005335	GAR1	69	96.364	ENSONIG00000001085	gar1	50	91.818	Oreochromis_niloticus
ENSCLAG00000005335	GAR1	69	100.000	ENSOANG00000003665	GAR1	78	75.287	Ornithorhynchus_anatinus
ENSCLAG00000005335	GAR1	69	98.182	ENSOCUG00000003901	GAR1	51	97.273	Oryctolagus_cuniculus
ENSCLAG00000005335	GAR1	69	96.364	ENSORLG00000020583	gar1	50	91.818	Oryzias_latipes
ENSCLAG00000005335	GAR1	69	96.364	ENSORLG00020008602	gar1	50	91.818	Oryzias_latipes_hni
ENSCLAG00000005335	GAR1	69	96.364	ENSORLG00015017643	gar1	50	91.818	Oryzias_latipes_hsok
ENSCLAG00000005335	GAR1	69	96.364	ENSOGAG00000004693	GAR1	52	96.364	Otolemur_garnettii
ENSCLAG00000005335	GAR1	96	91.358	ENSOARG00000004910	GAR1	52	98.182	Ovis_aries
ENSCLAG00000005335	GAR1	99	96.250	ENSPPAG00000014081	GAR1	55	97.273	Pan_paniscus
ENSCLAG00000005335	GAR1	69	98.182	ENSPPRG00000023697	GAR1	53	97.273	Panthera_pardus
ENSCLAG00000005335	GAR1	96	96.104	ENSPTIG00000021565	GAR1	53	97.273	Panthera_tigris_altaica
ENSCLAG00000005335	GAR1	99	94.937	ENSPTRG00000016364	GAR1	61	97.521	Pan_troglodytes
ENSCLAG00000005335	GAR1	69	80.000	ENSPTRG00000049340	-	51	79.630	Pan_troglodytes
ENSCLAG00000005335	GAR1	99	94.937	ENSPANG00000000639	GAR1	51	97.273	Papio_anubis
ENSCLAG00000005335	GAR1	69	94.545	ENSPSIG00000002970	GAR1	50	90.000	Pelodiscus_sinensis
ENSCLAG00000005335	GAR1	100	95.000	ENSPEMG00000015838	Gar1	100	95.000	Peromyscus_maniculatus_bairdii
ENSCLAG00000005335	GAR1	69	94.545	ENSPFOG00000024155	gar1	52	90.000	Poecilia_formosa
ENSCLAG00000005335	GAR1	69	94.545	ENSPLAG00000015056	gar1	52	90.000	Poecilia_latipinna
ENSCLAG00000005335	GAR1	69	94.545	ENSPMEG00000009320	gar1	53	90.909	Poecilia_mexicana
ENSCLAG00000005335	GAR1	69	98.182	ENSPPYG00000014996	GAR1	51	97.273	Pongo_abelii
ENSCLAG00000005335	GAR1	96	96.104	ENSPCOG00000027049	GAR1	56	97.273	Propithecus_coquereli
ENSCLAG00000005335	GAR1	70	98.214	ENSRNOG00000061146	Gar1	64	94.545	Rattus_norvegicus
ENSCLAG00000005335	GAR1	99	94.937	ENSRBIG00000019547	GAR1	61	97.521	Rhinopithecus_bieti
ENSCLAG00000005335	GAR1	70	76.786	ENSRBIG00000042411	-	53	80.000	Rhinopithecus_bieti
ENSCLAG00000005335	GAR1	99	94.937	ENSRROG00000028454	GAR1	61	97.521	Rhinopithecus_roxellana
ENSCLAG00000005335	GAR1	70	76.786	ENSRROG00000044348	-	53	80.000	Rhinopithecus_roxellana
ENSCLAG00000005335	GAR1	96	96.154	ENSSBOG00000024785	GAR1	51	97.273	Saimiri_boliviensis_boliviensis
ENSCLAG00000005335	GAR1	69	94.545	ENSSMAG00000009976	gar1	50	89.091	Scophthalmus_maximus
ENSCLAG00000005335	GAR1	69	96.364	ENSSLDG00000023264	gar1	52	90.909	Seriola_lalandi_dorsalis
ENSCLAG00000005335	GAR1	69	94.545	ENSSPUG00000008707	GAR1	61	90.909	Sphenodon_punctatus
ENSCLAG00000005335	GAR1	69	98.182	ENSSSCG00000009137	GAR1	54	98.182	Sus_scrofa
ENSCLAG00000005335	GAR1	75	93.333	ENSTGUG00000004185	GAR1	67	89.899	Taeniopygia_guttata
ENSCLAG00000005335	GAR1	69	89.091	ENSTRUG00000020580	gar1	53	88.182	Takifugu_rubripes
ENSCLAG00000005335	GAR1	81	86.154	ENSTNIG00000013023	gar1	66	89.655	Tetraodon_nigroviridis
ENSCLAG00000005335	GAR1	96	96.104	ENSUAMG00000005652	GAR1	57	97.273	Ursus_americanus
ENSCLAG00000005335	GAR1	69	98.182	ENSUMAG00000000776	GAR1	53	97.273	Ursus_maritimus
ENSCLAG00000005335	GAR1	69	98.182	ENSVVUG00000017612	GAR1	62	97.521	Vulpes_vulpes