EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCLAG00000005392 (Gene tree)
Gene ID
102019418
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Chinchilla_lanigera
Status
putative
Strand
Plus strand
Length
167188 bases
Position
chrJH721888.1:19714730-19881917
Accession
102019418
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCLAP00000007687zf-C2H2PF00096.261.3e-61111
ENSCLAP00000007687zf-C2H2PF00096.261.3e-61211
ENSCLAP00000007687zf-C2H2PF00096.261.3e-61311
ENSCLAP00000007687zf-C2H2PF00096.261.3e-61411
ENSCLAP00000007687zf-C2H2PF00096.261.3e-61511
ENSCLAP00000007687zf-C2H2PF00096.261.3e-61611
ENSCLAP00000007687zf-C2H2PF00096.261.3e-61711
ENSCLAP00000007687zf-C2H2PF00096.261.3e-61811
ENSCLAP00000007687zf-C2H2PF00096.261.3e-61911
ENSCLAP00000007687zf-C2H2PF00096.261.3e-611011
ENSCLAP00000007687zf-C2H2PF00096.261.3e-611111
ENSCLAP00000007688zf-C2H2PF00096.262.9e-50110
ENSCLAP00000007688zf-C2H2PF00096.262.9e-50210
ENSCLAP00000007688zf-C2H2PF00096.262.9e-50310
ENSCLAP00000007688zf-C2H2PF00096.262.9e-50410
ENSCLAP00000007688zf-C2H2PF00096.262.9e-50510
ENSCLAP00000007688zf-C2H2PF00096.262.9e-50610
ENSCLAP00000007688zf-C2H2PF00096.262.9e-50710
ENSCLAP00000007688zf-C2H2PF00096.262.9e-50810
ENSCLAP00000007688zf-C2H2PF00096.262.9e-50910
ENSCLAP00000007688zf-C2H2PF00096.262.9e-501010
ENSCLAP00000007689zf-C2H2PF00096.263e-4417
ENSCLAP00000007689zf-C2H2PF00096.263e-4427
ENSCLAP00000007689zf-C2H2PF00096.263e-4437
ENSCLAP00000007689zf-C2H2PF00096.263e-4447
ENSCLAP00000007689zf-C2H2PF00096.263e-4457
ENSCLAP00000007689zf-C2H2PF00096.263e-4467
ENSCLAP00000007689zf-C2H2PF00096.263e-4477
ENSCLAP00000007690zf-C2H2PF00096.261.7e-2715
ENSCLAP00000007690zf-C2H2PF00096.261.7e-2725
ENSCLAP00000007690zf-C2H2PF00096.261.7e-2735
ENSCLAP00000007690zf-C2H2PF00096.261.7e-2745
ENSCLAP00000007690zf-C2H2PF00096.261.7e-2755
ENSCLAP00000007689zf-metPF12874.74.8e-2313
ENSCLAP00000007689zf-metPF12874.74.8e-2323
ENSCLAP00000007689zf-metPF12874.74.8e-2333
ENSCLAP00000007687zf-metPF12874.74.9e-2213
ENSCLAP00000007687zf-metPF12874.74.9e-2223
ENSCLAP00000007687zf-metPF12874.74.9e-2233
ENSCLAP00000007688zf-metPF12874.71.3e-1713
ENSCLAP00000007688zf-metPF12874.71.3e-1723
ENSCLAP00000007688zf-metPF12874.71.3e-1733
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCLAT00000007809PRDM5-204573-ENSCLAP00000007690190 (aa)-UPI000BAD47C7
ENSCLAT00000007808PRDM5-2031413-ENSCLAP00000007689470 (aa)--
ENSCLAT00000007807PRDM5-2021155-ENSCLAP00000007688384 (aa)--
ENSCLAT00000007806PRDM5-2015185XM_013515254ENSCLAP00000007687568 (aa)XP_013370708-
Gene Model
Click here to download ENSCLAG00000005392's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005392's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCLAG00000005392PRDM57844.643ENSCLAG00000013368ZNF6525134.634
ENSCLAG00000005392PRDM58751.408ENSCLAG00000012556-8247.887
ENSCLAG00000005392PRDM57544.928ENSCLAG00000000758-6144.928
ENSCLAG00000005392PRDM59834.078ENSCLAG00000001937PRDM145235.971
ENSCLAG00000005392PRDM58247.959ENSCLAG00000003483ZNF1126847.959
ENSCLAG00000005392PRDM57432.491ENSCLAG00000003912GTF3A8833.562
ENSCLAG00000005392PRDM58544.231ENSCLAG00000006252ZNF5748230.556
ENSCLAG00000005392PRDM58340.741ENSCLAG00000001598ZNF7847340.741
ENSCLAG00000005392PRDM58148.696ENSCLAG00000010195-8448.696
ENSCLAG00000005392PRDM58143.220ENSCLAG00000001374WT15141.284
ENSCLAG00000005392PRDM58446.099ENSCLAG00000001377-7246.099
ENSCLAG00000005392PRDM58434.884ENSCLAG00000014824-7734.884
ENSCLAG00000005392PRDM59647.273ENSCLAG00000005499PRDM125947.273
ENSCLAG00000005392PRDM57950.562ENSCLAG00000004223ZFP18441.071
ENSCLAG00000005392PRDM58131.915ENSCLAG00000016426OVOL15231.915
ENSCLAG00000005392PRDM57841.818ENSCLAG00000006380SALL15641.818
ENSCLAG00000005392PRDM58341.640ENSCLAG00000003065ZNF2267546.610
ENSCLAG00000005392PRDM58338.889ENSCLAG00000015550ZNF3845734.328
ENSCLAG00000005392PRDM58341.844ENSCLAG00000003116ZNF26944.068
ENSCLAG00000005392PRDM58940.566ENSCLAG00000010565ZNF5219840.566
ENSCLAG00000005392PRDM57946.226ENSCLAG00000011533ZNF7685444.094
ENSCLAG00000005392PRDM58341.176ENSCLAG00000006953ZNF3198839.583
ENSCLAG00000005392PRDM57438.095ENSCLAG00000002951ZNF5267530.800
ENSCLAG00000005392PRDM58538.889ENSCLAG00000008329ZFP646538.889
ENSCLAG00000005392PRDM58345.714ENSCLAG00000014648-7745.714
ENSCLAG00000005392PRDM59139.583ENSCLAG00000007342ZNF4239240.000
ENSCLAG00000005392PRDM58042.157ENSCLAG00000011797SNAI25741.481
ENSCLAG00000005392PRDM57650.000ENSCLAG00000010479SALL45151.852
ENSCLAG00000005392PRDM58343.216ENSCLAG00000000250ZNF5506643.216
ENSCLAG00000005392PRDM58538.710ENSCLAG00000011313ZNF6467130.631
ENSCLAG00000005392PRDM58243.056ENSCLAG00000001537ZNF816243.056
ENSCLAG00000005392PRDM59246.739ENSCLAG00000007793ZNF2366747.273
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCLAG00000005392PRDM510098.734ENSG00000138738PRDM59598.734Homo_sapiens
ENSCLAG00000005392PRDM510088.667ENSAPOG00000023220prdm59587.658Acanthochromis_polyacanthus
ENSCLAG00000005392PRDM59391.195ENSAMEG00000003050PRDM510091.195Ailuropoda_melanoleuca
ENSCLAG00000005392PRDM510087.658ENSACIG00000000406prdm59587.658Amphilophus_citrinellus
ENSCLAG00000005392PRDM510088.667ENSAOCG00000014806prdm59587.342Amphiprion_ocellaris
ENSCLAG00000005392PRDM59677.263ENSAPEG00000016846prdm59478.366Amphiprion_percula
ENSCLAG00000005392PRDM510088.667ENSATEG00000013829prdm59587.658Anabas_testudineus
ENSCLAG00000005392PRDM510089.333ENSAPLG00000013828PRDM510089.241Anas_platyrhynchos
ENSCLAG00000005392PRDM510089.241ENSACAG00000012999PRDM59589.241Anolis_carolinensis
ENSCLAG00000005392PRDM510099.474ENSANAG00000027411PRDM59598.101Aotus_nancymaae
ENSCLAG00000005392PRDM510088.667ENSACLG00000017996prdm59587.658Astatotilapia_calliptera
ENSCLAG00000005392PRDM58888.000ENSAMXG00000041864prdm58788.462Astyanax_mexicanus
ENSCLAG00000005392PRDM510097.785ENSBTAG00000012111PRDM59597.785Bos_taurus
ENSCLAG00000005392PRDM510098.947ENSCJAG00000003133PRDM59598.101Callithrix_jacchus
ENSCLAG00000005392PRDM510093.939ENSCAFG00000004179PRDM59697.990Canis_familiaris
ENSCLAG00000005392PRDM510098.418ENSCAFG00020017685PRDM59598.418Canis_lupus_dingo
ENSCLAG00000005392PRDM510097.468ENSCHIG00000018772PRDM59597.468Capra_hircus
ENSCLAG00000005392PRDM59997.328ENSTSYG00000009630PRDM59597.328Carlito_syrichta
ENSCLAG00000005392PRDM5100100.000ENSCAPG00000015217PRDM5100100.000Cavia_aperea
ENSCLAG00000005392PRDM5100100.000ENSCPOG00000012883PRDM5100100.000Cavia_porcellus
ENSCLAG00000005392PRDM510099.474ENSCCAG00000023157PRDM59598.418Cebus_capucinus
ENSCLAG00000005392PRDM510099.474ENSCATG00000042510PRDM59598.734Cercocebus_atys
ENSCLAG00000005392PRDM510098.667ENSCSAG00000003729PRDM59598.734Chlorocebus_sabaeus
ENSCLAG00000005392PRDM510098.000ENSCHOG00000007801PRDM58098.000Choloepus_hoffmanni
ENSCLAG00000005392PRDM510089.557ENSCPBG00000024735PRDM59589.557Chrysemys_picta_bellii
ENSCLAG00000005392PRDM510099.474ENSCANG00000036807PRDM59598.734Colobus_angolensis_palliatus
ENSCLAG00000005392PRDM510097.917ENSCGRG00001010581Prdm59397.917Cricetulus_griseus_chok1gshd
ENSCLAG00000005392PRDM510096.667ENSCGRG00000010996-9997.786Cricetulus_griseus_crigri
ENSCLAG00000005392PRDM510088.000ENSCSEG00000019979prdm59586.709Cynoglossus_semilaevis
ENSCLAG00000005392PRDM510088.667ENSCVAG00000013692prdm59088.667Cyprinodon_variegatus
ENSCLAG00000005392PRDM59890.411ENSDARG00000006288prdm59587.500Danio_rerio
ENSCLAG00000005392PRDM510096.026ENSDNOG00000002009PRDM510097.476Dasypus_novemcinctus
ENSCLAG00000005392PRDM510097.656ENSDORG00000007739Prdm59397.656Dipodomys_ordii
ENSCLAG00000005392PRDM510098.291ENSETEG00000020268PRDM59087.402Echinops_telfairi
ENSCLAG00000005392PRDM59989.262ENSEBUG00000004301prdm59584.444Eptatretus_burgeri
ENSCLAG00000005392PRDM510098.947ENSEASG00005018365PRDM59598.418Equus_asinus_asinus
ENSCLAG00000005392PRDM59997.391ENSECAG00000011516PRDM58597.391Equus_caballus
ENSCLAG00000005392PRDM510086.753ENSECAG00000024747-9286.753Equus_caballus
ENSCLAG00000005392PRDM59995.833ENSEEUG00000010306PRDM59595.420Erinaceus_europaeus
ENSCLAG00000005392PRDM59791.803ENSELUG00000005894prdm58788.106Esox_lucius
ENSCLAG00000005392PRDM510098.101ENSFCAG00000025656PRDM59598.101Felis_catus
ENSCLAG00000005392PRDM59770.000ENSFALG00000008381PRDM59070.000Ficedula_albicollis
ENSCLAG00000005392PRDM510099.474ENSFDAG00000021361PRDM59599.367Fukomys_damarensis
ENSCLAG00000005392PRDM59890.411ENSFHEG00000013040prdm59588.462Fundulus_heteroclitus
ENSCLAG00000005392PRDM59191.176ENSGMOG00000012038prdm510091.667Gadus_morhua
ENSCLAG00000005392PRDM510089.333ENSGALG00000011963PRDM59588.924Gallus_gallus
ENSCLAG00000005392PRDM59791.803ENSGAFG00000019233prdm58988.106Gambusia_affinis
ENSCLAG00000005392PRDM59989.899ENSGAGG00000020362PRDM59389.899Gopherus_agassizii
ENSCLAG00000005392PRDM510099.474ENSGGOG00000013562PRDM59598.734Gorilla_gorilla
ENSCLAG00000005392PRDM510088.667ENSHBUG00000023375prdm59587.658Haplochromis_burtoni
ENSCLAG00000005392PRDM59698.485ENSHGLG00000003010PRDM59495.778Heterocephalus_glaber_female
ENSCLAG00000005392PRDM5100100.000ENSHGLG00100003696PRDM59599.051Heterocephalus_glaber_male
ENSCLAG00000005392PRDM59989.262ENSHCOG00000012131prdm59587.975Hippocampus_comes
ENSCLAG00000005392PRDM59792.708ENSIPUG00000001248prdm59587.658Ictalurus_punctatus
ENSCLAG00000005392PRDM510096.842ENSSTOG00000004741PRDM510096.842Ictidomys_tridecemlineatus
ENSCLAG00000005392PRDM510098.667ENSJJAG00000011464Prdm510098.667Jaculus_jaculus
ENSCLAG00000005392PRDM510088.000ENSKMAG00000013663prdm59587.342Kryptolebias_marmoratus
ENSCLAG00000005392PRDM510088.667ENSLBEG00000022736prdm59587.342Labrus_bergylta
ENSCLAG00000005392PRDM510089.333ENSLACG00000009187PRDM59989.557Latimeria_chalumnae
ENSCLAG00000005392PRDM59989.262ENSLOCG00000009778prdm59587.342Lepisosteus_oculatus
ENSCLAG00000005392PRDM510097.333ENSLAFG00000006532PRDM59797.333Loxodonta_africana
ENSCLAG00000005392PRDM510099.474ENSMFAG00000045845PRDM59598.734Macaca_fascicularis
ENSCLAG00000005392PRDM510099.474ENSMMUG00000003249PRDM59598.734Macaca_mulatta
ENSCLAG00000005392PRDM510099.474ENSMNEG00000019018PRDM59598.734Macaca_nemestrina
ENSCLAG00000005392PRDM510098.734ENSMLEG00000023145PRDM510098.734Mandrillus_leucophaeus
ENSCLAG00000005392PRDM510088.000ENSMAMG00000013419prdm59587.658Mastacembelus_armatus
ENSCLAG00000005392PRDM510088.667ENSMZEG00005020645prdm59587.658Maylandia_zebra
ENSCLAG00000005392PRDM510089.333ENSMGAG00000010710PRDM510088.924Meleagris_gallopavo
ENSCLAG00000005392PRDM510097.656ENSMAUG00000006768Prdm59397.656Mesocricetus_auratus
ENSCLAG00000005392PRDM510099.474ENSMICG00000001459PRDM59598.418Microcebus_murinus
ENSCLAG00000005392PRDM510097.917ENSMOCG00000016267Prdm59597.785Microtus_ochrogaster
ENSCLAG00000005392PRDM510088.667ENSMMOG00000006035prdm59586.709Mola_mola
ENSCLAG00000005392PRDM510088.667ENSMODG00000018942PRDM59588.291Monodelphis_domestica
ENSCLAG00000005392PRDM510088.667ENSMALG00000013934prdm59088.667Monopterus_albus
ENSCLAG00000005392PRDM510098.177MGP_CAROLIEiJ_G0028463Prdm59898.101Mus_caroli
ENSCLAG00000005392PRDM510097.917ENSMUSG00000029913Prdm59597.785Mus_musculus
ENSCLAG00000005392PRDM510098.177MGP_PahariEiJ_G0022203Prdm59598.101Mus_pahari
ENSCLAG00000005392PRDM510097.917MGP_SPRETEiJ_G0029467Prdm59597.785Mus_spretus
ENSCLAG00000005392PRDM510097.785ENSMPUG00000017415PRDM59597.785Mustela_putorius_furo
ENSCLAG00000005392PRDM59390.000ENSMLUG00000006097PRDM510090.000Myotis_lucifugus
ENSCLAG00000005392PRDM510097.785ENSNGAG00000018317Prdm59397.396Nannospalax_galili
ENSCLAG00000005392PRDM59776.419ENSNBRG00000004976prdm59580.189Neolamprologus_brichardi
ENSCLAG00000005392PRDM510099.474ENSNLEG00000009107PRDM59598.734Nomascus_leucogenys
ENSCLAG00000005392PRDM58989.286ENSMEUG00000006576-6689.286Notamacropus_eugenii
ENSCLAG00000005392PRDM59295.057ENSOPRG00000011066-8970.309Ochotona_princeps
ENSCLAG00000005392PRDM510099.474ENSODEG00000009133PRDM59399.219Octodon_degus
ENSCLAG00000005392PRDM510088.667ENSONIG00000003111prdm59587.658Oreochromis_niloticus
ENSCLAG00000005392PRDM58186.667ENSOANG00000006197-10086.667Ornithorhynchus_anatinus
ENSCLAG00000005392PRDM59989.950ENSOANG00000015109PRDM59189.950Ornithorhynchus_anatinus
ENSCLAG00000005392PRDM59487.686ENSOCUG00000013454PRDM510087.025Oryctolagus_cuniculus
ENSCLAG00000005392PRDM510088.667ENSORLG00000016247prdm59587.342Oryzias_latipes
ENSCLAG00000005392PRDM510088.667ENSORLG00020018051prdm59587.342Oryzias_latipes_hni
ENSCLAG00000005392PRDM510088.667ENSORLG00015013760prdm59587.342Oryzias_latipes_hsok
ENSCLAG00000005392PRDM510088.667ENSOMEG00000005143prdm59587.658Oryzias_melastigma
ENSCLAG00000005392PRDM58999.333ENSOGAG00000009996PRDM59399.333Otolemur_garnettii
ENSCLAG00000005392PRDM59996.992ENSOARG00000015473PRDM510097.980Ovis_aries
ENSCLAG00000005392PRDM510098.734ENSPPAG00000043045PRDM510098.734Pan_paniscus
ENSCLAG00000005392PRDM510098.101ENSPPRG00000001020PRDM59598.101Panthera_pardus
ENSCLAG00000005392PRDM510098.101ENSPTIG00000010807PRDM59598.101Panthera_tigris_altaica
ENSCLAG00000005392PRDM510099.474ENSPTRG00000016403PRDM59598.734Pan_troglodytes
ENSCLAG00000005392PRDM510099.474ENSPANG00000023612PRDM59598.734Papio_anubis
ENSCLAG00000005392PRDM510087.288ENSPKIG00000015492prdm58987.288Paramormyrops_kingsleyae
ENSCLAG00000005392PRDM510089.557ENSPSIG00000013505PRDM59589.557Pelodiscus_sinensis
ENSCLAG00000005392PRDM510088.000ENSPMGG00000012622prdm59088.000Periophthalmus_magnuspinnatus
ENSCLAG00000005392PRDM57890.722ENSPMAG00000005248prdm510090.722Petromyzon_marinus
ENSCLAG00000005392PRDM59874.927ENSPFOG00000018630prdm59176.093Poecilia_formosa
ENSCLAG00000005392PRDM510088.667ENSPLAG00000014148prdm59587.658Poecilia_latipinna
ENSCLAG00000005392PRDM510088.667ENSPMEG00000018002prdm59587.658Poecilia_mexicana
ENSCLAG00000005392PRDM510088.667ENSPREG00000018366prdm59587.658Poecilia_reticulata
ENSCLAG00000005392PRDM510098.734ENSPPYG00000015031PRDM59598.734Pongo_abelii
ENSCLAG00000005392PRDM510097.333ENSPCAG00000011671PRDM59597.333Procavia_capensis
ENSCLAG00000005392PRDM5100100.000ENSPCOG00000022828PRDM59598.730Propithecus_coquereli
ENSCLAG00000005392PRDM510093.987ENSPVAG00000012309PRDM510093.987Pteropus_vampyrus
ENSCLAG00000005392PRDM510088.667ENSPNYG00000012194prdm59587.658Pundamilia_nyererei
ENSCLAG00000005392PRDM59890.411ENSPNAG00000026181prdm59588.462Pygocentrus_nattereri
ENSCLAG00000005392PRDM59886.301ENSPNAG00000023191-9983.654Pygocentrus_nattereri
ENSCLAG00000005392PRDM59992.580ENSRNOG00000023679Prdm59492.580Rattus_norvegicus
ENSCLAG00000005392PRDM510099.474ENSRBIG00000041307PRDM59598.734Rhinopithecus_bieti
ENSCLAG00000005392PRDM510093.210ENSRROG00000035343PRDM59593.210Rhinopithecus_roxellana
ENSCLAG00000005392PRDM510098.947ENSSBOG00000022100PRDM59598.418Saimiri_boliviensis_boliviensis
ENSCLAG00000005392PRDM59890.164ENSSHAG00000003250PRDM59990.164Sarcophilus_harrisii
ENSCLAG00000005392PRDM510089.333ENSSFOG00015020478prdm59587.342Scleropages_formosus
ENSCLAG00000005392PRDM510088.667ENSSMAG00000018844prdm59587.342Scophthalmus_maximus
ENSCLAG00000005392PRDM59991.803ENSSDUG00000020397prdm59587.658Seriola_dumerili
ENSCLAG00000005392PRDM59992.784ENSSLDG00000013353prdm59587.658Seriola_lalandi_dorsalis
ENSCLAG00000005392PRDM5100100.000ENSSARG00000014129-6897.436Sorex_araneus
ENSCLAG00000005392PRDM510091.053ENSSPUG00000009941PRDM59588.924Sphenodon_punctatus
ENSCLAG00000005392PRDM510088.667ENSSPAG00000013866prdm59587.342Stegastes_partitus
ENSCLAG00000005392PRDM510098.658ENSSSCG00000009101PRDM59598.418Sus_scrofa
ENSCLAG00000005392PRDM510089.333ENSTGUG00000001920PRDM510089.241Taeniopygia_guttata
ENSCLAG00000005392PRDM510088.667ENSTRUG00000013850prdm59587.025Takifugu_rubripes
ENSCLAG00000005392PRDM510074.834ENSTNIG00000005901prdm59569.811Tetraodon_nigroviridis
ENSCLAG00000005392PRDM596100.000ENSTBEG00000015386PRDM585100.000Tupaia_belangeri
ENSCLAG00000005392PRDM510097.785ENSTTRG00000010996PRDM59597.785Tursiops_truncatus
ENSCLAG00000005392PRDM59997.020ENSUAMG00000009994PRDM58496.154Ursus_americanus
ENSCLAG00000005392PRDM510098.698ENSUMAG00000003733PRDM59998.698Ursus_maritimus
ENSCLAG00000005392PRDM510082.000ENSVPAG00000007435PRDM59882.195Vicugna_pacos
ENSCLAG00000005392PRDM510098.000ENSVVUG00000013192PRDM510098.418Vulpes_vulpes
ENSCLAG00000005392PRDM510082.270ENSXETG00000002101prdm59581.962Xenopus_tropicalis
ENSCLAG00000005392PRDM510088.667ENSXCOG00000008567prdm59587.658Xiphophorus_couchianus
ENSCLAG00000005392PRDM59791.803ENSXMAG00000013825prdm59587.658Xiphophorus_maculatus

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