EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005472 (Gene tree)
Gene ID: 102021346
Gene Symbol: FAM172A
Alias: C5orf21|DKFZP564D172|Toupee
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 343239 bases
Position: chrJH721878.1:18245947-18589185
Accession: 102021346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007794	Arb2	PF09757.9	7.5e-10	1	1
ENSCLAP00000007795	Arb2	PF09757.9	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007915	FAM172A-202	840	-	ENSCLAP00000007795	279 (aa)	-	-
ENSCLAT00000007914	FAM172A-201	1170	XM_005382263	ENSCLAP00000007794	389 (aa)	XP_005382320	-

Gene Model

Click here to download ENSCLAG00000005472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005472	FAM172A	100	97.468	ENSG00000113391	FAM172A	100	97.468	Homo_sapiens
ENSCLAG00000005472	FAM172A	66	39.572	ENSAPLG00000011555	-	77	40.741	Anas_platyrhynchos
ENSCLAG00000005472	FAM172A	100	89.873	ENSAPLG00000004055	FAM172A	100	79.808	Anas_platyrhynchos
ENSCLAG00000005472	FAM172A	93	89.873	ENSACAG00000013305	FAM172A	96	87.568	Anolis_carolinensis
ENSCLAG00000005472	FAM172A	91	92.632	ENSANAG00000035869	FAM172A	89	95.455	Aotus_nancymaae
ENSCLAG00000005472	FAM172A	100	98.734	ENSBTAG00000050195	FAM172A	100	88.221	Bos_taurus
ENSCLAG00000005472	FAM172A	100	98.734	ENSCJAG00000010444	FAM172A	100	88.221	Callithrix_jacchus
ENSCLAG00000005472	FAM172A	94	98.734	ENSCAFG00000008064	FAM172A	100	96.496	Canis_familiaris
ENSCLAG00000005472	FAM172A	100	98.734	ENSCAFG00020006210	FAM172A	94	96.565	Canis_lupus_dingo
ENSCLAG00000005472	FAM172A	100	98.734	ENSCHIG00000008440	FAM172A	100	88.221	Capra_hircus
ENSCLAG00000005472	FAM172A	72	95.455	ENSTSYG00000006286	FAM172A	85	96.992	Carlito_syrichta
ENSCLAG00000005472	FAM172A	69	100.000	ENSCAPG00000014103	-	100	100.000	Cavia_aperea
ENSCLAG00000005472	FAM172A	100	98.734	ENSCCAG00000023116	FAM172A	100	87.981	Cebus_capucinus
ENSCLAG00000005472	FAM172A	90	50.617	ENSCPBG00000004402	-	84	44.954	Chrysemys_picta_bellii
ENSCLAG00000005472	FAM172A	74	93.548	ENSCANG00000040412	FAM172A	92	95.185	Colobus_angolensis_palliatus
ENSCLAG00000005472	FAM172A	100	97.468	ENSDNOG00000004689	FAM172A	100	87.500	Dasypus_novemcinctus
ENSCLAG00000005472	FAM172A	74	93.548	ENSDORG00000013558	Fam172a	88	95.167	Dipodomys_ordii
ENSCLAG00000005472	FAM172A	80	39.032	ENSEBUG00000016097	-	58	39.032	Eptatretus_burgeri
ENSCLAG00000005472	FAM172A	100	97.468	ENSECAG00000018274	FAM172A	98	95.393	Equus_caballus
ENSCLAG00000005472	FAM172A	96	74.750	ENSEEUG00000002887	FAM172A	100	74.760	Erinaceus_europaeus
ENSCLAG00000005472	FAM172A	96	68.548	ENSELUG00000017647	fam172a	88	68.548	Esox_lucius
ENSCLAG00000005472	FAM172A	100	98.734	ENSFCAG00000025443	FAM172A	100	88.221	Felis_catus
ENSCLAG00000005472	FAM172A	94	88.608	ENSFALG00000009072	FAM172A	97	87.569	Ficedula_albicollis
ENSCLAG00000005472	FAM172A	88	56.923	ENSFALG00000006501	-	85	45.981	Ficedula_albicollis
ENSCLAG00000005472	FAM172A	100	88.608	ENSGALG00000014661	FAM172A	100	79.327	Gallus_gallus
ENSCLAG00000005472	FAM172A	100	93.671	ENSGAGG00000003839	FAM172A	100	82.692	Gopherus_agassizii
ENSCLAG00000005472	FAM172A	87	55.385	ENSGAGG00000022828	-	81	46.302	Gopherus_agassizii
ENSCLAG00000005472	FAM172A	100	98.734	ENSGGOG00000010296	FAM172A	100	87.740	Gorilla_gorilla
ENSCLAG00000005472	FAM172A	100	98.734	ENSHGLG00000011178	FAM172A	100	98.734	Heterocephalus_glaber_female
ENSCLAG00000005472	FAM172A	95	97.832	ENSHGLG00100013340	FAM172A	100	98.734	Heterocephalus_glaber_male
ENSCLAG00000005472	FAM172A	100	98.734	ENSSTOG00000009918	FAM172A	100	88.221	Ictidomys_tridecemlineatus
ENSCLAG00000005472	FAM172A	86	48.348	ENSLACG00000001532	si:ch73-41e3.7	88	48.348	Latimeria_chalumnae
ENSCLAG00000005472	FAM172A	95	76.757	ENSLOCG00000001629	fam172a	88	76.757	Lepisosteus_oculatus
ENSCLAG00000005472	FAM172A	74	93.548	ENSMFAG00000001171	FAM172A	92	95.185	Macaca_fascicularis
ENSCLAG00000005472	FAM172A	100	98.734	ENSMNEG00000039938	FAM172A	92	95.185	Macaca_nemestrina
ENSCLAG00000005472	FAM172A	100	98.734	ENSMICG00000030403	FAM172A	100	88.702	Microcebus_murinus
ENSCLAG00000005472	FAM172A	100	96.203	ENSMOCG00000003613	Fam172a	100	86.216	Microtus_ochrogaster
ENSCLAG00000005472	FAM172A	93	92.405	ENSMODG00000020131	FAM172A	89	88.649	Monodelphis_domestica
ENSCLAG00000005472	FAM172A	100	83.333	MGP_PahariEiJ_G0015818	Fam172a	100	94.937	Mus_pahari
ENSCLAG00000005472	FAM172A	100	97.468	ENSNGAG00000019570	Fam172a	100	88.108	Nannospalax_galili
ENSCLAG00000005472	FAM172A	74	93.548	ENSNLEG00000013903	FAM172A	89	95.185	Nomascus_leucogenys
ENSCLAG00000005472	FAM172A	93	89.873	ENSOANG00000011068	FAM172A	99	87.838	Ornithorhynchus_anatinus
ENSCLAG00000005472	FAM172A	93	98.734	ENSOCUG00000007299	FAM172A	88	95.935	Oryctolagus_cuniculus
ENSCLAG00000005472	FAM172A	97	86.914	ENSOGAG00000015189	FAM172A	100	87.019	Otolemur_garnettii
ENSCLAG00000005472	FAM172A	95	98.734	ENSOARG00000016711	FAM172A	86	94.709	Ovis_aries
ENSCLAG00000005472	FAM172A	74	94.086	ENSPPAG00000030542	FAM172A	92	95.556	Pan_paniscus
ENSCLAG00000005472	FAM172A	100	98.734	ENSPPRG00000006653	FAM172A	100	88.221	Panthera_pardus
ENSCLAG00000005472	FAM172A	100	98.734	ENSPTIG00000012681	FAM172A	100	88.221	Panthera_tigris_altaica
ENSCLAG00000005472	FAM172A	74	94.086	ENSPTRG00000017074	FAM172A	92	95.556	Pan_troglodytes
ENSCLAG00000005472	FAM172A	74	93.548	ENSPANG00000011687	FAM172A	92	95.185	Papio_anubis
ENSCLAG00000005472	FAM172A	98	83.544	ENSPKIG00000012314	fam172a	96	73.315	Paramormyrops_kingsleyae
ENSCLAG00000005472	FAM172A	100	97.468	ENSPEMG00000009604	-	100	97.468	Peromyscus_maniculatus_bairdii
ENSCLAG00000005472	FAM172A	93	93.671	ENSPCIG00000028612	FAM172A	89	88.378	Phascolarctos_cinereus
ENSCLAG00000005472	FAM172A	76	78.992	ENSPCOG00000024072	FAM172A	96	78.992	Propithecus_coquereli
ENSCLAG00000005472	FAM172A	73	91.892	ENSRNOG00000013844	Fam172a	99	93.309	Rattus_norvegicus
ENSCLAG00000005472	FAM172A	70	82.564	ENSRBIG00000028680	-	87	82.564	Rhinopithecus_bieti
ENSCLAG00000005472	FAM172A	74	93.548	ENSRROG00000023807	FAM172A	92	95.185	Rhinopithecus_roxellana
ENSCLAG00000005472	FAM172A	100	98.734	ENSSBOG00000019860	FAM172A	94	96.477	Saimiri_boliviensis_boliviensis
ENSCLAG00000005472	FAM172A	100	91.139	ENSSHAG00000013743	FAM172A	100	80.048	Sarcophilus_harrisii
ENSCLAG00000005472	FAM172A	100	89.873	ENSSPUG00000008161	FAM172A	100	80.288	Sphenodon_punctatus
ENSCLAG00000005472	FAM172A	94	98.734	ENSSSCG00000027608	FAM172A	97	95.946	Sus_scrofa
ENSCLAG00000005472	FAM172A	100	88.608	ENSTGUG00000000715	FAM172A	100	80.000	Taeniopygia_guttata
ENSCLAG00000005472	FAM172A	87	60.656	ENSTGUG00000013623	-	92	47.097	Taeniopygia_guttata
ENSCLAG00000005472	FAM172A	85	79.747	ENSTNIG00000009902	fam172a	100	59.226	Tetraodon_nigroviridis
ENSCLAG00000005472	FAM172A	95	95.122	ENSTTRG00000001521	FAM172A	89	95.122	Tursiops_truncatus
ENSCLAG00000005472	FAM172A	100	98.734	ENSUMAG00000005442	FAM172A	99	96.486	Ursus_maritimus
ENSCLAG00000005472	FAM172A	100	98.734	ENSVVUG00000022112	FAM172A	98	96.486	Vulpes_vulpes
ENSCLAG00000005472	FAM172A	100	73.206	ENSXETG00000011592	fam172a	99	73.206	Xenopus_tropicalis
ENSCLAG00000005472	FAM172A	89	42.571	ENSXETG00000033027	-	90	42.571	Xenopus_tropicalis