EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005482 (Gene tree)
Gene ID: 102008360
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 28910 bases
Position: chrJH721907.1:4476004-4504913
Accession: 102008360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007820	YTH	PF04146.15	9e-40	1	1
ENSCLAP00000007819	YTH	PF04146.15	9.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007940	YTHDC1-202	2103	-	ENSCLAP00000007820	701 (aa)	-	-
ENSCLAT00000007939	YTHDC1-201	2181	XM_005392822	ENSCLAP00000007819	727 (aa)	XP_005392879	-

Gene Model

Click here to download ENSCLAG00000005482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005482's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005482	YTHDC1	99	97.793	ENSG00000083896	YTHDC1	99	97.793	Homo_sapiens
ENSCLAG00000005482	YTHDC1	58	59.102	ENSAPOG00000013997	ythdc1	57	62.250	Acanthochromis_polyacanthus
ENSCLAG00000005482	YTHDC1	99	93.897	ENSAMEG00000005688	YTHDC1	99	93.897	Ailuropoda_melanoleuca
ENSCLAG00000005482	YTHDC1	70	58.353	ENSACIG00000019728	ythdc1	78	59.398	Amphilophus_citrinellus
ENSCLAG00000005482	YTHDC1	58	60.135	ENSAOCG00000000239	ythdc1	92	55.193	Amphiprion_ocellaris
ENSCLAG00000005482	YTHDC1	50	64.151	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSCLAG00000005482	YTHDC1	92	83.756	ENSAPLG00000009921	YTHDC1	92	85.395	Anas_platyrhynchos
ENSCLAG00000005482	YTHDC1	92	83.308	ENSACAG00000009697	YTHDC1	91	83.458	Anolis_carolinensis
ENSCLAG00000005482	YTHDC1	99	97.521	ENSANAG00000001522	YTHDC1	99	97.521	Aotus_nancymaae
ENSCLAG00000005482	YTHDC1	58	58.333	ENSACLG00000019371	ythdc1	92	54.772	Astatotilapia_calliptera
ENSCLAG00000005482	YTHDC1	92	65.113	ENSAMXG00000006978	ythdc1	91	65.559	Astyanax_mexicanus
ENSCLAG00000005482	YTHDC1	92	92.560	ENSBTAG00000015572	YTHDC1	91	93.452	Bos_taurus
ENSCLAG00000005482	YTHDC1	99	97.714	ENSCJAG00000009934	YTHDC1	99	97.714	Callithrix_jacchus
ENSCLAG00000005482	YTHDC1	92	92.582	ENSCAFG00000002821	YTHDC1	91	92.878	Canis_familiaris
ENSCLAG00000005482	YTHDC1	92	92.582	ENSCAFG00020027112	YTHDC1	91	92.878	Canis_lupus_dingo
ENSCLAG00000005482	YTHDC1	92	88.379	ENSCHIG00000004810	YTHDC1	95	94.073	Capra_hircus
ENSCLAG00000005482	YTHDC1	99	97.854	ENSTSYG00000011668	YTHDC1	99	97.854	Carlito_syrichta
ENSCLAG00000005482	YTHDC1	99	74.131	ENSCAPG00000008722	YTHDC1	99	74.131	Cavia_aperea
ENSCLAG00000005482	YTHDC1	99	92.275	ENSCPOG00000010929	YTHDC1	99	91.448	Cavia_porcellus
ENSCLAG00000005482	YTHDC1	99	97.994	ENSCCAG00000035754	YTHDC1	99	97.994	Cebus_capucinus
ENSCLAG00000005482	YTHDC1	99	97.796	ENSCATG00000036320	YTHDC1	99	97.796	Cercocebus_atys
ENSCLAG00000005482	YTHDC1	99	96.556	ENSCSAG00000005252	YTHDC1	99	96.556	Chlorocebus_sabaeus
ENSCLAG00000005482	YTHDC1	92	86.140	ENSCPBG00000021965	YTHDC1	94	86.565	Chrysemys_picta_bellii
ENSCLAG00000005482	YTHDC1	99	97.796	ENSCANG00000004769	YTHDC1	99	97.796	Colobus_angolensis_palliatus
ENSCLAG00000005482	YTHDC1	99	96.690	ENSCGRG00001000816	Ythdc1	99	96.690	Cricetulus_griseus_chok1gshd
ENSCLAG00000005482	YTHDC1	99	95.461	ENSCGRG00000009807	Ythdc1	99	95.461	Cricetulus_griseus_crigri
ENSCLAG00000005482	YTHDC1	58	59.868	ENSCSEG00000020404	ythdc1	92	54.386	Cynoglossus_semilaevis
ENSCLAG00000005482	YTHDC1	56	60.952	ENSCVAG00000022349	ythdc1	92	53.143	Cyprinodon_variegatus
ENSCLAG00000005482	YTHDC1	92	64.079	ENSDARG00000051953	ythdc1	91	64.340	Danio_rerio
ENSCLAG00000005482	YTHDC1	99	95.034	ENSDNOG00000004949	YTHDC1	99	95.034	Dasypus_novemcinctus
ENSCLAG00000005482	YTHDC1	100	96.849	ENSDORG00000013045	Ythdc1	100	97.147	Dipodomys_ordii
ENSCLAG00000005482	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	77	100.000	Echinops_telfairi
ENSCLAG00000005482	YTHDC1	99	95.748	ENSEASG00005018383	YTHDC1	100	95.494	Equus_asinus_asinus
ENSCLAG00000005482	YTHDC1	99	93.897	ENSECAG00000018303	YTHDC1	100	96.073	Equus_caballus
ENSCLAG00000005482	YTHDC1	92	91.518	ENSEEUG00000015466	YTHDC1	91	92.262	Erinaceus_europaeus
ENSCLAG00000005482	YTHDC1	92	62.722	ENSELUG00000014029	ythdc1	93	63.077	Esox_lucius
ENSCLAG00000005482	YTHDC1	92	93.972	ENSFCAG00000026791	YTHDC1	91	94.590	Felis_catus
ENSCLAG00000005482	YTHDC1	68	87.387	ENSFALG00000006581	YTHDC1	85	91.408	Ficedula_albicollis
ENSCLAG00000005482	YTHDC1	99	98.854	ENSFDAG00000018560	YTHDC1	100	98.854	Fukomys_damarensis
ENSCLAG00000005482	YTHDC1	65	67.925	ENSFHEG00000001286	ythdc1	63	53.501	Fundulus_heteroclitus
ENSCLAG00000005482	YTHDC1	64	63.830	ENSGMOG00000018815	ythdc1	78	63.830	Gadus_morhua
ENSCLAG00000005482	YTHDC1	92	86.202	ENSGALG00000035906	YTHDC1	88	83.588	Gallus_gallus
ENSCLAG00000005482	YTHDC1	58	62.093	ENSGACG00000015486	ythdc1	58	61.985	Gasterosteus_aculeatus
ENSCLAG00000005482	YTHDC1	92	87.073	ENSGAGG00000007108	YTHDC1	92	87.073	Gopherus_agassizii
ENSCLAG00000005482	YTHDC1	99	97.658	ENSGGOG00000021958	YTHDC1	99	97.658	Gorilla_gorilla
ENSCLAG00000005482	YTHDC1	58	58.333	ENSHBUG00000019288	ythdc1	92	54.772	Haplochromis_burtoni
ENSCLAG00000005482	YTHDC1	94	70.972	ENSHGLG00000003239	-	85	73.284	Heterocephalus_glaber_female
ENSCLAG00000005482	YTHDC1	99	98.481	ENSHGLG00000006319	-	99	98.481	Heterocephalus_glaber_female
ENSCLAG00000005482	YTHDC1	99	97.652	ENSHGLG00100001556	-	99	97.652	Heterocephalus_glaber_male
ENSCLAG00000005482	YTHDC1	94	69.509	ENSHGLG00100008060	-	86	71.768	Heterocephalus_glaber_male
ENSCLAG00000005482	YTHDC1	53	67.568	ENSHCOG00000001520	ythdc1	82	67.568	Hippocampus_comes
ENSCLAG00000005482	YTHDC1	92	67.153	ENSIPUG00000018136	ythdc1	91	66.812	Ictalurus_punctatus
ENSCLAG00000005482	YTHDC1	99	97.521	ENSSTOG00000013652	YTHDC1	99	97.521	Ictidomys_tridecemlineatus
ENSCLAG00000005482	YTHDC1	92	91.791	ENSJJAG00000010268	Ythdc1	92	93.433	Jaculus_jaculus
ENSCLAG00000005482	YTHDC1	58	59.417	ENSKMAG00000006483	ythdc1	86	64.637	Kryptolebias_marmoratus
ENSCLAG00000005482	YTHDC1	62	62.745	ENSLBEG00000020831	ythdc1	72	73.529	Labrus_bergylta
ENSCLAG00000005482	YTHDC1	88	72.317	ENSLACG00000004893	YTHDC1	92	73.529	Latimeria_chalumnae
ENSCLAG00000005482	YTHDC1	92	73.254	ENSLOCG00000003045	ythdc1	86	72.889	Lepisosteus_oculatus
ENSCLAG00000005482	YTHDC1	99	96.547	ENSLAFG00000021592	YTHDC1	99	96.547	Loxodonta_africana
ENSCLAG00000005482	YTHDC1	99	97.796	ENSMFAG00000031927	YTHDC1	99	97.796	Macaca_fascicularis
ENSCLAG00000005482	YTHDC1	99	97.796	ENSMMUG00000002265	YTHDC1	99	97.796	Macaca_mulatta
ENSCLAG00000005482	YTHDC1	99	97.796	ENSMNEG00000033751	YTHDC1	99	97.796	Macaca_nemestrina
ENSCLAG00000005482	YTHDC1	99	97.796	ENSMLEG00000042147	YTHDC1	99	97.796	Mandrillus_leucophaeus
ENSCLAG00000005482	YTHDC1	56	61.631	ENSMAMG00000013122	ythdc1	91	55.556	Mastacembelus_armatus
ENSCLAG00000005482	YTHDC1	58	58.333	ENSMZEG00005023173	ythdc1	92	54.772	Maylandia_zebra
ENSCLAG00000005482	YTHDC1	92	83.607	ENSMGAG00000010391	YTHDC1	91	84.948	Meleagris_gallopavo
ENSCLAG00000005482	YTHDC1	99	92.828	ENSMAUG00000001286	Ythdc1	99	92.828	Mesocricetus_auratus
ENSCLAG00000005482	YTHDC1	99	97.111	ENSMICG00000034640	YTHDC1	99	97.111	Microcebus_murinus
ENSCLAG00000005482	YTHDC1	100	96.424	ENSMOCG00000020201	Ythdc1	99	96.823	Microtus_ochrogaster
ENSCLAG00000005482	YTHDC1	96	50.287	ENSMODG00000010076	-	60	59.719	Monodelphis_domestica
ENSCLAG00000005482	YTHDC1	92	88.060	ENSMODG00000020754	-	91	87.761	Monodelphis_domestica
ENSCLAG00000005482	YTHDC1	86	68.981	ENSMODG00000014337	-	94	69.307	Monodelphis_domestica
ENSCLAG00000005482	YTHDC1	66	56.485	ENSMODG00000009173	-	88	59.953	Monodelphis_domestica
ENSCLAG00000005482	YTHDC1	51	65.699	ENSMALG00000013412	ythdc1	57	68.451	Monopterus_albus
ENSCLAG00000005482	YTHDC1	99	96.699	MGP_CAROLIEiJ_G0027347	Ythdc1	99	96.699	Mus_caroli
ENSCLAG00000005482	YTHDC1	99	96.561	ENSMUSG00000035851	Ythdc1	99	96.561	Mus_musculus
ENSCLAG00000005482	YTHDC1	99	96.699	MGP_PahariEiJ_G0017126	Ythdc1	99	96.699	Mus_pahari
ENSCLAG00000005482	YTHDC1	99	96.836	MGP_SPRETEiJ_G0028339	Ythdc1	99	96.836	Mus_spretus
ENSCLAG00000005482	YTHDC1	92	72.271	ENSMPUG00000001743	YTHDC1	53	95.908	Mustela_putorius_furo
ENSCLAG00000005482	YTHDC1	99	95.580	ENSMLUG00000016300	YTHDC1	100	95.580	Myotis_lucifugus
ENSCLAG00000005482	YTHDC1	60	91.962	ENSNGAG00000024000	Ythdc1	93	94.575	Nannospalax_galili
ENSCLAG00000005482	YTHDC1	60	64.087	ENSNBRG00000007663	ythdc1	70	65.534	Neolamprologus_brichardi
ENSCLAG00000005482	YTHDC1	99	96.970	ENSNLEG00000009202	YTHDC1	99	96.970	Nomascus_leucogenys
ENSCLAG00000005482	YTHDC1	83	81.271	ENSMEUG00000007128	YTHDC1	81	81.271	Notamacropus_eugenii
ENSCLAG00000005482	YTHDC1	76	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSCLAG00000005482	YTHDC1	99	99.171	ENSODEG00000001715	YTHDC1	99	99.140	Octodon_degus
ENSCLAG00000005482	YTHDC1	92	49.415	ENSONIG00000012651	ythdc1	92	55.066	Oreochromis_niloticus
ENSCLAG00000005482	YTHDC1	89	76.408	ENSOANG00000014398	YTHDC1	55	96.709	Ornithorhynchus_anatinus
ENSCLAG00000005482	YTHDC1	93	80.415	ENSOCUG00000015886	YTHDC1	57	93.103	Oryctolagus_cuniculus
ENSCLAG00000005482	YTHDC1	92	52.096	ENSORLG00000030544	ythdc1	93	55.306	Oryzias_latipes
ENSCLAG00000005482	YTHDC1	92	52.402	ENSORLG00020019316	ythdc1	93	55.157	Oryzias_latipes_hni
ENSCLAG00000005482	YTHDC1	56	61.275	ENSOMEG00000000551	ythdc1	93	54.751	Oryzias_melastigma
ENSCLAG00000005482	YTHDC1	99	95.310	ENSOGAG00000003362	YTHDC1	99	95.310	Otolemur_garnettii
ENSCLAG00000005482	YTHDC1	92	92.560	ENSOARG00000008633	YTHDC1	91	93.452	Ovis_aries
ENSCLAG00000005482	YTHDC1	99	97.793	ENSPPAG00000041315	YTHDC1	99	97.793	Pan_paniscus
ENSCLAG00000005482	YTHDC1	99	96.429	ENSPPRG00000011979	YTHDC1	99	96.429	Panthera_pardus
ENSCLAG00000005482	YTHDC1	92	93.759	ENSPTIG00000015527	YTHDC1	93	94.799	Panthera_tigris_altaica
ENSCLAG00000005482	YTHDC1	99	97.793	ENSPTRG00000016105	YTHDC1	99	97.793	Pan_troglodytes
ENSCLAG00000005482	YTHDC1	99	97.796	ENSPANG00000021590	YTHDC1	99	97.796	Papio_anubis
ENSCLAG00000005482	YTHDC1	92	68.228	ENSPKIG00000018497	ythdc1	91	68.029	Paramormyrops_kingsleyae
ENSCLAG00000005482	YTHDC1	92	85.693	ENSPSIG00000002782	YTHDC1	92	85.693	Pelodiscus_sinensis
ENSCLAG00000005482	YTHDC1	99	96.966	ENSPEMG00000013850	Ythdc1	100	96.853	Peromyscus_maniculatus_bairdii
ENSCLAG00000005482	YTHDC1	92	88.820	ENSPCIG00000006870	YTHDC1	91	88.509	Phascolarctos_cinereus
ENSCLAG00000005482	YTHDC1	58	58.259	ENSPFOG00000013404	ythdc1	62	64.471	Poecilia_formosa
ENSCLAG00000005482	YTHDC1	58	58.259	ENSPLAG00000011079	ythdc1	87	64.471	Poecilia_latipinna
ENSCLAG00000005482	YTHDC1	58	58.259	ENSPMEG00000009238	ythdc1	62	64.471	Poecilia_mexicana
ENSCLAG00000005482	YTHDC1	65	67.925	ENSPREG00000016973	ythdc1	58	59.606	Poecilia_reticulata
ENSCLAG00000005482	YTHDC1	88	96.562	ENSPPYG00000014726	YTHDC1	100	96.562	Pongo_abelii
ENSCLAG00000005482	YTHDC1	77	90.030	ENSPCAG00000009607	YTHDC1	75	89.426	Procavia_capensis
ENSCLAG00000005482	YTHDC1	99	92.572	ENSPCOG00000019105	YTHDC1	99	92.572	Propithecus_coquereli
ENSCLAG00000005482	YTHDC1	92	90.370	ENSPVAG00000015551	YTHDC1	91	90.815	Pteropus_vampyrus
ENSCLAG00000005482	YTHDC1	58	58.333	ENSPNYG00000011687	ythdc1	92	54.772	Pundamilia_nyererei
ENSCLAG00000005482	YTHDC1	92	69.141	ENSPNAG00000028365	ythdc1	91	68.605	Pygocentrus_nattereri
ENSCLAG00000005482	YTHDC1	99	95.885	ENSRNOG00000001996	Ythdc1	99	95.885	Rattus_norvegicus
ENSCLAG00000005482	YTHDC1	99	96.694	ENSRBIG00000028279	YTHDC1	99	96.694	Rhinopithecus_bieti
ENSCLAG00000005482	YTHDC1	99	97.796	ENSRROG00000035028	YTHDC1	99	97.796	Rhinopithecus_roxellana
ENSCLAG00000005482	YTHDC1	99	97.796	ENSSBOG00000022353	YTHDC1	99	97.796	Saimiri_boliviensis_boliviensis
ENSCLAG00000005482	YTHDC1	92	88.060	ENSSHAG00000002538	YTHDC1	91	87.761	Sarcophilus_harrisii
ENSCLAG00000005482	YTHDC1	92	68.275	ENSSFOG00015003298	ythdc1	60	83.721	Scleropages_formosus
ENSCLAG00000005482	YTHDC1	58	58.261	ENSSMAG00000009086	ythdc1	92	54.519	Scophthalmus_maximus
ENSCLAG00000005482	YTHDC1	56	60.775	ENSSDUG00000022008	ythdc1	92	57.249	Seriola_dumerili
ENSCLAG00000005482	YTHDC1	56	60.775	ENSSLDG00000007926	ythdc1	92	56.805	Seriola_lalandi_dorsalis
ENSCLAG00000005482	YTHDC1	80	96.075	ENSSARG00000010960	YTHDC1	100	96.075	Sorex_araneus
ENSCLAG00000005482	YTHDC1	92	81.790	ENSSPUG00000009357	YTHDC1	93	82.669	Sphenodon_punctatus
ENSCLAG00000005482	YTHDC1	58	61.036	ENSSPAG00000011449	ythdc1	92	56.869	Stegastes_partitus
ENSCLAG00000005482	YTHDC1	92	93.195	ENSSSCG00000035505	YTHDC1	92	93.701	Sus_scrofa
ENSCLAG00000005482	YTHDC1	92	84.948	ENSTGUG00000004452	-	91	84.948	Taeniopygia_guttata
ENSCLAG00000005482	YTHDC1	63	69.231	ENSTRUG00000010142	ythdc1	91	46.796	Takifugu_rubripes
ENSCLAG00000005482	YTHDC1	91	60.085	ENSTNIG00000013243	ythdc1	88	64.760	Tetraodon_nigroviridis
ENSCLAG00000005482	YTHDC1	92	86.207	ENSTBEG00000011546	YTHDC1	91	87.106	Tupaia_belangeri
ENSCLAG00000005482	YTHDC1	92	92.136	ENSTTRG00000005083	YTHDC1	91	92.878	Tursiops_truncatus
ENSCLAG00000005482	YTHDC1	94	96.218	ENSUAMG00000010388	YTHDC1	100	96.218	Ursus_americanus
ENSCLAG00000005482	YTHDC1	99	83.011	ENSUMAG00000013668	YTHDC1	98	83.011	Ursus_maritimus
ENSCLAG00000005482	YTHDC1	99	96.848	ENSVPAG00000009040	YTHDC1	99	96.848	Vicugna_pacos
ENSCLAG00000005482	YTHDC1	99	96.433	ENSVVUG00000005387	YTHDC1	98	96.433	Vulpes_vulpes
ENSCLAG00000005482	YTHDC1	92	73.481	ENSXETG00000017960	ythdc1	91	73.412	Xenopus_tropicalis
ENSCLAG00000005482	YTHDC1	58	58.259	ENSXMAG00000005196	ythdc1	62	63.765	Xiphophorus_maculatus