EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000005499 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 14758 bases
Position: chrJH721973.1:612566-627323
Accession: 102021268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007842	zf-C2H2	PF00096.26	8.9e-13	1	2
ENSCLAP00000007842	zf-C2H2	PF00096.26	8.9e-13	2	2
ENSCLAP00000007842	zf-met	PF12874.7	8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000007962	PRDM12-201	1098	XM_005408635	ENSCLAP00000007842	365 (aa)	XP_005408692	-

Gene Model

Click here to download ENSCLAG00000005499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000005499	PRDM12	72	31.597	ENSCLAG00000001937	PRDM14	58	31.597
ENSCLAG00000005499	PRDM12	59	47.273	ENSCLAG00000005392	PRDM5	96	47.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005499	PRDM12	92	97.006	ENSG00000130711	PRDM12	91	97.006	Homo_sapiens
ENSCLAG00000005499	PRDM12	90	78.917	ENSAPOG00000016051	prdm12b	90	80.290	Acanthochromis_polyacanthus
ENSCLAG00000005499	PRDM12	89	67.077	ENSAPOG00000018234	-	93	65.698	Acanthochromis_polyacanthus
ENSCLAG00000005499	PRDM12	88	93.498	ENSAMEG00000016234	PRDM12	99	93.498	Ailuropoda_melanoleuca
ENSCLAG00000005499	PRDM12	91	78.187	ENSACIG00000005193	-	93	77.904	Amphilophus_citrinellus
ENSCLAG00000005499	PRDM12	90	79.651	ENSACIG00000019578	prdm12b	90	80.588	Amphilophus_citrinellus
ENSCLAG00000005499	PRDM12	90	80.403	ENSAOCG00000015040	prdm12b	90	81.818	Amphiprion_ocellaris
ENSCLAG00000005499	PRDM12	89	78.571	ENSAPEG00000022849	-	88	77.647	Amphiprion_percula
ENSCLAG00000005499	PRDM12	90	81.105	ENSAPEG00000015092	prdm12b	90	82.544	Amphiprion_percula
ENSCLAG00000005499	PRDM12	89	80.175	ENSATEG00000014595	-	96	81.155	Anabas_testudineus
ENSCLAG00000005499	PRDM12	92	97.305	ENSANAG00000020616	PRDM12	98	97.305	Aotus_nancymaae
ENSCLAG00000005499	PRDM12	91	79.943	ENSACLG00000007631	-	89	79.943	Astatotilapia_calliptera
ENSCLAG00000005499	PRDM12	90	82.779	ENSACLG00000011876	prdm12b	91	82.779	Astatotilapia_calliptera
ENSCLAG00000005499	PRDM12	89	83.436	ENSAMXG00000008540	PRDM12	90	83.436	Astyanax_mexicanus
ENSCLAG00000005499	PRDM12	90	88.024	ENSAMXG00000033665	prdm12b	90	88.024	Astyanax_mexicanus
ENSCLAG00000005499	PRDM12	92	97.605	ENSBTAG00000023797	PRDM12	93	97.605	Bos_taurus
ENSCLAG00000005499	PRDM12	92	97.305	ENSCJAG00000020540	PRDM12	93	97.305	Callithrix_jacchus
ENSCLAG00000005499	PRDM12	80	96.564	ENSCAFG00000023076	PRDM12	90	96.564	Canis_familiaris
ENSCLAG00000005499	PRDM12	92	97.904	ENSCAFG00020024046	PRDM12	92	97.904	Canis_lupus_dingo
ENSCLAG00000005499	PRDM12	92	97.904	ENSCHIG00000025005	PRDM12	92	97.904	Capra_hircus
ENSCLAG00000005499	PRDM12	86	98.722	ENSCPOG00000005901	PRDM12	95	98.722	Cavia_porcellus
ENSCLAG00000005499	PRDM12	92	97.305	ENSCCAG00000037485	PRDM12	92	97.305	Cebus_capucinus
ENSCLAG00000005499	PRDM12	92	97.305	ENSCATG00000020327	PRDM12	92	97.305	Cercocebus_atys
ENSCLAG00000005499	PRDM12	92	97.305	ENSCSAG00000014756	PRDM12	92	97.305	Chlorocebus_sabaeus
ENSCLAG00000005499	PRDM12	92	92.814	ENSCPBG00000022628	PRDM12	94	92.814	Chrysemys_picta_bellii
ENSCLAG00000005499	PRDM12	92	98.204	ENSCGRG00001015005	Prdm12	91	98.204	Cricetulus_griseus_chok1gshd
ENSCLAG00000005499	PRDM12	90	76.923	ENSCVAG00000000944	-	91	76.554	Cyprinodon_variegatus
ENSCLAG00000005499	PRDM12	90	81.657	ENSCVAG00000017166	prdm12b	90	82.335	Cyprinodon_variegatus
ENSCLAG00000005499	PRDM12	91	85.380	ENSDARG00000007430	prdm12b	93	85.380	Danio_rerio
ENSCLAG00000005499	PRDM12	91	97.006	ENSDNOG00000042302	PRDM12	92	97.006	Dasypus_novemcinctus
ENSCLAG00000005499	PRDM12	88	62.393	ENSEBUG00000016780	prdm12b	78	63.818	Eptatretus_burgeri
ENSCLAG00000005499	PRDM12	92	98.204	ENSEASG00005008472	PRDM12	92	98.204	Equus_asinus_asinus
ENSCLAG00000005499	PRDM12	92	97.904	ENSECAG00000005933	PRDM12	92	97.904	Equus_caballus
ENSCLAG00000005499	PRDM12	90	85.714	ENSELUG00000009905	prdm12b	91	85.714	Esox_lucius
ENSCLAG00000005499	PRDM12	89	83.951	ENSELUG00000013674	PRDM12	89	83.951	Esox_lucius
ENSCLAG00000005499	PRDM12	92	97.904	ENSFCAG00000043086	PRDM12	92	97.904	Felis_catus
ENSCLAG00000005499	PRDM12	92	92.515	ENSFALG00000001445	PRDM12	84	92.515	Ficedula_albicollis
ENSCLAG00000005499	PRDM12	89	81.899	ENSFHEG00000003944	prdm12b	90	82.196	Fundulus_heteroclitus
ENSCLAG00000005499	PRDM12	90	79.651	ENSFHEG00000007746	-	88	80.588	Fundulus_heteroclitus
ENSCLAG00000005499	PRDM12	91	81.682	ENSGMOG00000011797	prdm12b	94	81.682	Gadus_morhua
ENSCLAG00000005499	PRDM12	92	92.515	ENSGALG00000003895	PRDM12	94	92.515	Gallus_gallus
ENSCLAG00000005499	PRDM12	90	82.440	ENSGAFG00000010827	prdm12b	90	82.440	Gambusia_affinis
ENSCLAG00000005499	PRDM12	90	83.136	ENSGACG00000016713	prdm12b	91	83.136	Gasterosteus_aculeatus
ENSCLAG00000005499	PRDM12	92	93.114	ENSGAGG00000014083	PRDM12	94	93.114	Gopherus_agassizii
ENSCLAG00000005499	PRDM12	92	96.707	ENSGGOG00000010568	PRDM12	91	96.707	Gorilla_gorilla
ENSCLAG00000005499	PRDM12	90	80.994	ENSHBUG00000022878	prdm12b	91	80.994	Haplochromis_burtoni
ENSCLAG00000005499	PRDM12	91	79.943	ENSHBUG00000022537	-	82	79.943	Haplochromis_burtoni
ENSCLAG00000005499	PRDM12	100	91.781	ENSHGLG00000013939	PRDM12	100	91.781	Heterocephalus_glaber_female
ENSCLAG00000005499	PRDM12	89	80.702	ENSHCOG00000003663	prdm12b	88	80.347	Hippocampus_comes
ENSCLAG00000005499	PRDM12	91	75.882	ENSHCOG00000021167	-	95	75.882	Hippocampus_comes
ENSCLAG00000005499	PRDM12	90	87.126	ENSIPUG00000017053	prdm12b	91	87.126	Ictalurus_punctatus
ENSCLAG00000005499	PRDM12	89	82.317	ENSIPUG00000019544	PRDM12	90	82.317	Ictalurus_punctatus
ENSCLAG00000005499	PRDM12	92	98.503	ENSSTOG00000005986	PRDM12	87	98.503	Ictidomys_tridecemlineatus
ENSCLAG00000005499	PRDM12	90	99.091	ENSJJAG00000005424	Prdm12	100	99.091	Jaculus_jaculus
ENSCLAG00000005499	PRDM12	90	78.492	ENSKMAG00000016921	prdm12b	90	77.901	Kryptolebias_marmoratus
ENSCLAG00000005499	PRDM12	90	79.586	ENSKMAG00000021205	-	95	79.586	Kryptolebias_marmoratus
ENSCLAG00000005499	PRDM12	89	83.234	ENSLBEG00000017769	prdm12b	88	83.234	Labrus_bergylta
ENSCLAG00000005499	PRDM12	89	80.119	ENSLBEG00000007776	-	89	80.415	Labrus_bergylta
ENSCLAG00000005499	PRDM12	91	90.090	ENSLACG00000017560	PRDM12	94	90.090	Latimeria_chalumnae
ENSCLAG00000005499	PRDM12	91	86.136	ENSLOCG00000005429	prdm12b	93	86.431	Lepisosteus_oculatus
ENSCLAG00000005499	PRDM12	92	96.176	ENSLAFG00000006979	PRDM12	91	96.176	Loxodonta_africana
ENSCLAG00000005499	PRDM12	92	97.305	ENSMFAG00000040322	PRDM12	91	97.305	Macaca_fascicularis
ENSCLAG00000005499	PRDM12	92	97.305	ENSMNEG00000037234	PRDM12	92	97.305	Macaca_nemestrina
ENSCLAG00000005499	PRDM12	89	80.357	ENSMAMG00000018988	-	86	80.655	Mastacembelus_armatus
ENSCLAG00000005499	PRDM12	90	81.818	ENSMAMG00000013212	prdm12b	90	82.789	Mastacembelus_armatus
ENSCLAG00000005499	PRDM12	91	79.943	ENSMZEG00005000415	PRDM12	88	79.943	Maylandia_zebra
ENSCLAG00000005499	PRDM12	92	92.515	ENSMGAG00000005438	PRDM12	94	92.515	Meleagris_gallopavo
ENSCLAG00000005499	PRDM12	100	92.877	ENSMAUG00000013040	Prdm12	100	92.877	Mesocricetus_auratus
ENSCLAG00000005499	PRDM12	92	97.904	ENSMICG00000015480	PRDM12	92	97.904	Microcebus_murinus
ENSCLAG00000005499	PRDM12	92	97.904	ENSMOCG00000021026	Prdm12	91	97.904	Microtus_ochrogaster
ENSCLAG00000005499	PRDM12	92	95.210	ENSMODG00000012108	PRDM12	94	95.210	Monodelphis_domestica
ENSCLAG00000005499	PRDM12	89	71.171	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSCLAG00000005499	PRDM12	92	97.904	MGP_CAROLIEiJ_G0023414	Prdm12	100	91.233	Mus_caroli
ENSCLAG00000005499	PRDM12	92	97.904	ENSMUSG00000079466	Prdm12	100	91.233	Mus_musculus
ENSCLAG00000005499	PRDM12	92	97.904	MGP_PahariEiJ_G0024871	Prdm12	100	91.233	Mus_pahari
ENSCLAG00000005499	PRDM12	92	97.904	MGP_SPRETEiJ_G0024331	Prdm12	100	91.233	Mus_spretus
ENSCLAG00000005499	PRDM12	91	97.590	ENSNGAG00000018480	Prdm12	94	97.590	Nannospalax_galili
ENSCLAG00000005499	PRDM12	90	80.290	ENSNBRG00000006727	prdm12b	91	80.290	Neolamprologus_brichardi
ENSCLAG00000005499	PRDM12	91	75.652	ENSNBRG00000024312	-	96	75.942	Neolamprologus_brichardi
ENSCLAG00000005499	PRDM12	92	83.832	ENSMEUG00000003828	PRDM12	94	83.832	Notamacropus_eugenii
ENSCLAG00000005499	PRDM12	90	96.970	ENSOPRG00000008680	PRDM12	100	96.970	Ochotona_princeps
ENSCLAG00000005499	PRDM12	92	99.102	ENSODEG00000016282	PRDM12	63	99.102	Octodon_degus
ENSCLAG00000005499	PRDM12	54	96.447	ENSOANG00000001043	PRDM12	91	96.447	Ornithorhynchus_anatinus
ENSCLAG00000005499	PRDM12	85	91.961	ENSOCUG00000008241	PRDM12	99	91.961	Oryctolagus_cuniculus
ENSCLAG00000005499	PRDM12	91	77.874	ENSORLG00000017558	-	89	78.161	Oryzias_latipes
ENSCLAG00000005499	PRDM12	90	80.403	ENSORLG00000007114	prdm12b	92	80.403	Oryzias_latipes
ENSCLAG00000005499	PRDM12	90	80.115	ENSORLG00020019565	prdm12b	91	80.115	Oryzias_latipes_hni
ENSCLAG00000005499	PRDM12	91	77.650	ENSORLG00020013167	-	89	77.937	Oryzias_latipes_hni
ENSCLAG00000005499	PRDM12	91	77.586	ENSORLG00015003435	-	89	78.161	Oryzias_latipes_hsok
ENSCLAG00000005499	PRDM12	90	79.827	ENSORLG00015007621	prdm12b	92	79.827	Oryzias_latipes_hsok
ENSCLAG00000005499	PRDM12	90	79.772	ENSOMEG00000004134	prdm12b	91	80.057	Oryzias_melastigma
ENSCLAG00000005499	PRDM12	91	77.401	ENSOMEG00000007762	-	95	77.401	Oryzias_melastigma
ENSCLAG00000005499	PRDM12	91	97.898	ENSOGAG00000007557	PRDM12	100	97.898	Otolemur_garnettii
ENSCLAG00000005499	PRDM12	80	94.881	ENSPPAG00000031506	-	99	94.881	Pan_paniscus
ENSCLAG00000005499	PRDM12	92	89.552	ENSPPRG00000023024	PRDM12	86	89.552	Panthera_pardus
ENSCLAG00000005499	PRDM12	92	97.006	ENSPTRG00000043324	-	91	97.006	Pan_troglodytes
ENSCLAG00000005499	PRDM12	92	97.006	ENSPTRG00000021475	PRDM12	91	97.006	Pan_troglodytes
ENSCLAG00000005499	PRDM12	92	97.305	ENSPANG00000025967	PRDM12	92	97.305	Papio_anubis
ENSCLAG00000005499	PRDM12	91	84.770	ENSPKIG00000007228	prdm12b	94	84.770	Paramormyrops_kingsleyae
ENSCLAG00000005499	PRDM12	89	80.240	ENSPKIG00000004305	PRDM12	94	80.240	Paramormyrops_kingsleyae
ENSCLAG00000005499	PRDM12	92	92.515	ENSPSIG00000006739	PRDM12	94	92.515	Pelodiscus_sinensis
ENSCLAG00000005499	PRDM12	90	82.544	ENSPMGG00000008867	prdm12b	91	82.544	Periophthalmus_magnuspinnatus
ENSCLAG00000005499	PRDM12	90	80.357	ENSPMGG00000002356	-	87	80.357	Periophthalmus_magnuspinnatus
ENSCLAG00000005499	PRDM12	91	98.489	ENSPEMG00000009969	Prdm12	91	98.489	Peromyscus_maniculatus_bairdii
ENSCLAG00000005499	PRDM12	92	94.910	ENSPCIG00000024119	PRDM12	94	94.910	Phascolarctos_cinereus
ENSCLAG00000005499	PRDM12	90	82.059	ENSPFOG00000019841	prdm12b	92	82.059	Poecilia_formosa
ENSCLAG00000005499	PRDM12	90	82.738	ENSPLAG00000016626	prdm12b	89	82.738	Poecilia_latipinna
ENSCLAG00000005499	PRDM12	87	82.209	ENSPMEG00000016698	prdm12b	89	82.209	Poecilia_mexicana
ENSCLAG00000005499	PRDM12	87	77.273	ENSPREG00000003211	-	91	77.273	Poecilia_reticulata
ENSCLAG00000005499	PRDM12	90	82.596	ENSPREG00000015073	prdm12b	89	82.596	Poecilia_reticulata
ENSCLAG00000005499	PRDM12	91	97.281	ENSPPYG00000019694	PRDM12	94	97.281	Pongo_abelii
ENSCLAG00000005499	PRDM12	92	97.904	ENSPCOG00000022255	PRDM12	91	97.904	Propithecus_coquereli
ENSCLAG00000005499	PRDM12	92	97.605	ENSPVAG00000001511	PRDM12	91	97.605	Pteropus_vampyrus
ENSCLAG00000005499	PRDM12	91	79.943	ENSPNYG00000013589	-	88	79.943	Pundamilia_nyererei
ENSCLAG00000005499	PRDM12	90	80.233	ENSPNYG00000009607	prdm12b	91	80.233	Pundamilia_nyererei
ENSCLAG00000005499	PRDM12	90	88.323	ENSPNAG00000024532	prdm12b	91	88.323	Pygocentrus_nattereri
ENSCLAG00000005499	PRDM12	89	80.606	ENSPNAG00000013396	PRDM12	88	80.547	Pygocentrus_nattereri
ENSCLAG00000005499	PRDM12	92	97.904	ENSRNOG00000009218	Prdm12	100	91.233	Rattus_norvegicus
ENSCLAG00000005499	PRDM12	87	97.476	ENSRBIG00000042712	PRDM12	91	95.137	Rhinopithecus_bieti
ENSCLAG00000005499	PRDM12	88	97.508	ENSRROG00000043554	PRDM12	100	97.508	Rhinopithecus_roxellana
ENSCLAG00000005499	PRDM12	92	94.030	ENSSHAG00000015972	PRDM12	94	94.030	Sarcophilus_harrisii
ENSCLAG00000005499	PRDM12	90	79.202	ENSSMAG00000003754	prdm12b	90	79.487	Scophthalmus_maximus
ENSCLAG00000005499	PRDM12	89	80.636	ENSSDUG00000023498	prdm12b	90	80.636	Seriola_dumerili
ENSCLAG00000005499	PRDM12	88	83.180	ENSSDUG00000019071	-	90	83.486	Seriola_dumerili
ENSCLAG00000005499	PRDM12	89	81.050	ENSSLDG00000009557	prdm12b	90	81.050	Seriola_lalandi_dorsalis
ENSCLAG00000005499	PRDM12	91	81.899	ENSSLDG00000013562	-	96	82.196	Seriola_lalandi_dorsalis
ENSCLAG00000005499	PRDM12	92	92.814	ENSSPUG00000013424	PRDM12	94	92.814	Sphenodon_punctatus
ENSCLAG00000005499	PRDM12	89	81.871	ENSSPAG00000018824	prdm12b	90	82.164	Stegastes_partitus
ENSCLAG00000005499	PRDM12	89	71.386	ENSSPAG00000022420	-	87	73.846	Stegastes_partitus
ENSCLAG00000005499	PRDM12	92	97.904	ENSSSCG00000005703	PRDM12	92	97.904	Sus_scrofa
ENSCLAG00000005499	PRDM12	89	80.120	ENSTRUG00000013239	-	93	80.120	Takifugu_rubripes
ENSCLAG00000005499	PRDM12	90	82.840	ENSTRUG00000018659	prdm12b	90	84.036	Takifugu_rubripes
ENSCLAG00000005499	PRDM12	89	79.697	ENSTNIG00000005859	-	92	79.697	Tetraodon_nigroviridis
ENSCLAG00000005499	PRDM12	90	83.136	ENSTNIG00000009020	prdm12b	91	83.136	Tetraodon_nigroviridis
ENSCLAG00000005499	PRDM12	92	97.904	ENSUAMG00000009653	PRDM12	93	97.904	Ursus_americanus
ENSCLAG00000005499	PRDM12	91	98.187	ENSVVUG00000027662	PRDM12	79	98.187	Vulpes_vulpes
ENSCLAG00000005499	PRDM12	90	82.440	ENSXCOG00000002836	prdm12b	90	82.440	Xiphophorus_couchianus
ENSCLAG00000005499	PRDM12	90	80.000	ENSXMAG00000028012	-	88	80.000	Xiphophorus_maculatus
ENSCLAG00000005499	PRDM12	90	81.953	ENSXMAG00000005537	prdm12b	89	82.635	Xiphophorus_maculatus