EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005567 (Gene tree)
Gene ID: 102010367
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 12173 bases
Position: chrJH721941.1:907441-919613
Accession: 102010367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000007936	AARP2CN	PF08142.12	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008056	TSR1-201	3471	XM_005402590	ENSCLAP00000007936	803 (aa)	XP_005402647	UPI00038EBAB5

Gene Model

Click here to download ENSCLAG00000005567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005567	TSR1	100	87.205	ENSG00000167721	TSR1	100	86.460	Homo_sapiens
ENSCLAG00000005567	TSR1	99	54.665	ENSAPOG00000020891	tsr1	99	55.716	Acanthochromis_polyacanthus
ENSCLAG00000005567	TSR1	100	86.486	ENSAMEG00000007599	TSR1	99	86.364	Ailuropoda_melanoleuca
ENSCLAG00000005567	TSR1	99	57.160	ENSACIG00000007090	tsr1	99	57.319	Amphilophus_citrinellus
ENSCLAG00000005567	TSR1	99	55.301	ENSAOCG00000023284	tsr1	99	55.018	Amphiprion_ocellaris
ENSCLAG00000005567	TSR1	94	55.754	ENSAPEG00000008452	tsr1	100	55.327	Amphiprion_percula
ENSCLAG00000005567	TSR1	99	54.742	ENSATEG00000021961	tsr1	99	55.462	Anabas_testudineus
ENSCLAG00000005567	TSR1	92	66.979	ENSAPLG00000013422	TSR1	100	68.683	Anas_platyrhynchos
ENSCLAG00000005567	TSR1	71	57.240	ENSACAG00000000859	TSR1	92	58.120	Anolis_carolinensis
ENSCLAG00000005567	TSR1	100	87.298	ENSANAG00000031071	TSR1	100	87.298	Aotus_nancymaae
ENSCLAG00000005567	TSR1	99	56.010	ENSACLG00000007595	tsr1	99	55.623	Astatotilapia_calliptera
ENSCLAG00000005567	TSR1	50	49.880	ENSAMXG00000008470	tsr1	90	48.630	Astyanax_mexicanus
ENSCLAG00000005567	TSR1	100	88.433	ENSBTAG00000004225	TSR1	100	88.806	Bos_taurus
ENSCLAG00000005567	TSR1	97	39.070	WBGene00006497	tag-151	96	39.723	Caenorhabditis_elegans
ENSCLAG00000005567	TSR1	100	86.675	ENSCJAG00000012456	TSR1	100	86.675	Callithrix_jacchus
ENSCLAG00000005567	TSR1	90	86.501	ENSCAFG00000019273	-	100	87.215	Canis_familiaris
ENSCLAG00000005567	TSR1	100	86.584	ENSCAFG00000002106	-	100	86.460	Canis_familiaris
ENSCLAG00000005567	TSR1	100	86.211	ENSCAFG00020009728	TSR1	100	86.087	Canis_lupus_dingo
ENSCLAG00000005567	TSR1	100	89.303	ENSCHIG00000023935	TSR1	100	89.677	Capra_hircus
ENSCLAG00000005567	TSR1	100	86.675	ENSTSYG00000005468	TSR1	100	86.675	Carlito_syrichta
ENSCLAG00000005567	TSR1	93	91.421	ENSCPOG00000014833	TSR1	99	91.823	Cavia_porcellus
ENSCLAG00000005567	TSR1	93	88.054	ENSCCAG00000028962	TSR1	98	88.054	Cebus_capucinus
ENSCLAG00000005567	TSR1	100	87.329	ENSCATG00000044262	TSR1	100	86.460	Cercocebus_atys
ENSCLAG00000005567	TSR1	100	87.205	ENSCSAG00000013788	TSR1	100	86.335	Chlorocebus_sabaeus
ENSCLAG00000005567	TSR1	99	68.539	ENSCPBG00000020363	TSR1	97	69.307	Chrysemys_picta_bellii
ENSCLAG00000005567	TSR1	97	46.532	ENSCING00000020658	-	99	46.280	Ciona_intestinalis
ENSCLAG00000005567	TSR1	97	45.603	ENSCSAVG00000001875	-	100	44.569	Ciona_savignyi
ENSCLAG00000005567	TSR1	100	76.770	ENSCANG00000033056	TSR1	100	75.866	Colobus_angolensis_palliatus
ENSCLAG00000005567	TSR1	100	84.577	ENSCGRG00001023942	Tsr1	100	85.821	Cricetulus_griseus_chok1gshd
ENSCLAG00000005567	TSR1	100	78.954	ENSCGRG00000013015	Tsr1	100	80.448	Cricetulus_griseus_crigri
ENSCLAG00000005567	TSR1	99	54.994	ENSCSEG00000013009	tsr1	99	55.152	Cynoglossus_semilaevis
ENSCLAG00000005567	TSR1	99	55.462	ENSCVAG00000000506	tsr1	99	55.043	Cyprinodon_variegatus
ENSCLAG00000005567	TSR1	99	53.856	ENSDARG00000007744	tsr1	99	54.712	Danio_rerio
ENSCLAG00000005567	TSR1	100	87.671	ENSDNOG00000004715	TSR1	100	88.693	Dasypus_novemcinctus
ENSCLAG00000005567	TSR1	97	73.650	ENSDORG00000023234	-	100	74.550	Dipodomys_ordii
ENSCLAG00000005567	TSR1	100	85.697	ENSDORG00000016371	-	100	85.945	Dipodomys_ordii
ENSCLAG00000005567	TSR1	97	43.494	FBgn0037073	Tsr1	96	44.238	Drosophila_melanogaster
ENSCLAG00000005567	TSR1	92	89.836	ENSETEG00000017534	TSR1	92	89.836	Echinops_telfairi
ENSCLAG00000005567	TSR1	94	54.008	ENSEBUG00000013731	TSR1	96	54.008	Eptatretus_burgeri
ENSCLAG00000005567	TSR1	100	88.930	ENSEASG00005009302	TSR1	97	89.303	Equus_asinus_asinus
ENSCLAG00000005567	TSR1	100	88.806	ENSECAG00000009114	TSR1	100	89.179	Equus_caballus
ENSCLAG00000005567	TSR1	99	54.982	ENSELUG00000020984	tsr1	95	55.918	Esox_lucius
ENSCLAG00000005567	TSR1	100	87.562	ENSFCAG00000006313	TSR1	100	87.687	Felis_catus
ENSCLAG00000005567	TSR1	99	68.889	ENSFALG00000006532	TSR1	99	69.506	Ficedula_albicollis
ENSCLAG00000005567	TSR1	100	91.781	ENSFDAG00000006038	TSR1	100	91.532	Fukomys_damarensis
ENSCLAG00000005567	TSR1	99	54.491	ENSFHEG00000003626	tsr1	99	54.688	Fundulus_heteroclitus
ENSCLAG00000005567	TSR1	99	52.567	ENSGMOG00000010336	tsr1	99	53.667	Gadus_morhua
ENSCLAG00000005567	TSR1	99	54.699	ENSGAFG00000012993	tsr1	99	55.502	Gambusia_affinis
ENSCLAG00000005567	TSR1	99	54.779	ENSGACG00000010843	tsr1	99	55.270	Gasterosteus_aculeatus
ENSCLAG00000005567	TSR1	99	69.511	ENSGAGG00000025619	-	99	69.279	Gopherus_agassizii
ENSCLAG00000005567	TSR1	100	87.453	ENSGGOG00000001704	TSR1	100	86.708	Gorilla_gorilla
ENSCLAG00000005567	TSR1	99	55.928	ENSHBUG00000017904	tsr1	100	55.882	Haplochromis_burtoni
ENSCLAG00000005567	TSR1	97	80.952	ENSHGLG00000015688	-	99	80.952	Heterocephalus_glaber_female
ENSCLAG00000005567	TSR1	100	92.164	ENSHGLG00000012806	-	100	92.040	Heterocephalus_glaber_female
ENSCLAG00000005567	TSR1	100	92.164	ENSHGLG00100015392	TSR1	100	92.040	Heterocephalus_glaber_male
ENSCLAG00000005567	TSR1	99	56.914	ENSHCOG00000001432	tsr1	99	56.914	Hippocampus_comes
ENSCLAG00000005567	TSR1	99	54.699	ENSIPUG00000004618	tsr1	99	55.783	Ictalurus_punctatus
ENSCLAG00000005567	TSR1	100	87.469	ENSSTOG00000011819	TSR1	100	87.965	Ictidomys_tridecemlineatus
ENSCLAG00000005567	TSR1	92	79.539	ENSJJAG00000019505	Tsr1	95	79.348	Jaculus_jaculus
ENSCLAG00000005567	TSR1	99	54.699	ENSKMAG00000005763	tsr1	99	54.358	Kryptolebias_marmoratus
ENSCLAG00000005567	TSR1	99	54.513	ENSLBEG00000021823	tsr1	99	55.475	Labrus_bergylta
ENSCLAG00000005567	TSR1	99	62.592	ENSLACG00000002197	TSR1	99	62.546	Latimeria_chalumnae
ENSCLAG00000005567	TSR1	82	57.824	ENSLOCG00000006491	TSR1	98	51.720	Lepisosteus_oculatus
ENSCLAG00000005567	TSR1	100	87.453	ENSMFAG00000021330	TSR1	100	86.584	Macaca_fascicularis
ENSCLAG00000005567	TSR1	100	87.205	ENSMMUG00000017519	TSR1	100	86.335	Macaca_mulatta
ENSCLAG00000005567	TSR1	100	87.081	ENSMNEG00000031382	TSR1	100	86.211	Macaca_nemestrina
ENSCLAG00000005567	TSR1	100	87.205	ENSMLEG00000036733	TSR1	100	86.335	Mandrillus_leucophaeus
ENSCLAG00000005567	TSR1	99	54.535	ENSMAMG00000017918	tsr1	99	55.090	Mastacembelus_armatus
ENSCLAG00000005567	TSR1	99	55.744	ENSMZEG00005007477	tsr1	99	56.000	Maylandia_zebra
ENSCLAG00000005567	TSR1	99	67.901	ENSMGAG00000005576	TSR1	99	68.395	Meleagris_gallopavo
ENSCLAG00000005567	TSR1	100	88.557	ENSMICG00000012943	TSR1	100	88.806	Microcebus_murinus
ENSCLAG00000005567	TSR1	100	84.080	ENSMOCG00000022764	Tsr1	100	84.577	Microtus_ochrogaster
ENSCLAG00000005567	TSR1	99	55.286	ENSMMOG00000014280	tsr1	99	55.732	Mola_mola
ENSCLAG00000005567	TSR1	100	77.736	ENSMODG00000010658	TSR1	100	77.736	Monodelphis_domestica
ENSCLAG00000005567	TSR1	100	85.554	MGP_CAROLIEiJ_G0016727	Tsr1	100	85.554	Mus_caroli
ENSCLAG00000005567	TSR1	100	86.177	ENSMUSG00000038335	Tsr1	100	86.177	Mus_musculus
ENSCLAG00000005567	TSR1	100	86.177	MGP_PahariEiJ_G0017864	Tsr1	100	86.177	Mus_pahari
ENSCLAG00000005567	TSR1	100	86.426	MGP_SPRETEiJ_G0017570	Tsr1	100	86.426	Mus_spretus
ENSCLAG00000005567	TSR1	82	87.043	ENSMPUG00000013000	TSR1	100	86.890	Mustela_putorius_furo
ENSCLAG00000005567	TSR1	100	89.552	ENSMLUG00000003505	TSR1	100	89.925	Myotis_lucifugus
ENSCLAG00000005567	TSR1	99	55.702	ENSNBRG00000020728	tsr1	99	55.314	Neolamprologus_brichardi
ENSCLAG00000005567	TSR1	100	78.829	ENSNLEG00000017184	TSR1	100	81.445	Nomascus_leucogenys
ENSCLAG00000005567	TSR1	100	71.553	ENSMEUG00000015828	TSR1	100	71.995	Notamacropus_eugenii
ENSCLAG00000005567	TSR1	99	56.744	ENSONIG00000013131	tsr1	99	56.744	Oreochromis_niloticus
ENSCLAG00000005567	TSR1	96	72.072	ENSOANG00000008637	TSR1	100	71.686	Ornithorhynchus_anatinus
ENSCLAG00000005567	TSR1	100	86.318	ENSOCUG00000014256	TSR1	100	86.692	Oryctolagus_cuniculus
ENSCLAG00000005567	TSR1	99	54.436	ENSORLG00000004926	tsr1	99	55.836	Oryzias_latipes
ENSCLAG00000005567	TSR1	99	54.502	ENSORLG00020008792	tsr1	99	54.699	Oryzias_latipes_hni
ENSCLAG00000005567	TSR1	99	54.317	ENSORLG00015013838	tsr1	99	55.716	Oryzias_latipes_hsok
ENSCLAG00000005567	TSR1	99	55.048	ENSOMEG00000004830	tsr1	99	55.596	Oryzias_melastigma
ENSCLAG00000005567	TSR1	100	87.037	ENSOGAG00000004492	TSR1	100	87.037	Otolemur_garnettii
ENSCLAG00000005567	TSR1	100	88.557	ENSOARG00000015437	TSR1	97	88.930	Ovis_aries
ENSCLAG00000005567	TSR1	100	87.205	ENSPPAG00000036355	TSR1	100	86.460	Pan_paniscus
ENSCLAG00000005567	TSR1	100	87.438	ENSPPRG00000015519	-	100	87.438	Panthera_pardus
ENSCLAG00000005567	TSR1	100	87.687	ENSPTIG00000010608	TSR1	100	87.687	Panthera_tigris_altaica
ENSCLAG00000005567	TSR1	100	87.205	ENSPTRG00000008547	TSR1	100	86.460	Pan_troglodytes
ENSCLAG00000005567	TSR1	100	83.851	ENSPANG00000024463	TSR1	100	82.981	Papio_anubis
ENSCLAG00000005567	TSR1	99	55.087	ENSPKIG00000013972	tsr1	99	54.950	Paramormyrops_kingsleyae
ENSCLAG00000005567	TSR1	88	68.118	ENSPSIG00000018258	TSR1	100	68.079	Pelodiscus_sinensis
ENSCLAG00000005567	TSR1	99	57.125	ENSPMGG00000011577	tsr1	99	57.407	Periophthalmus_magnuspinnatus
ENSCLAG00000005567	TSR1	100	85.305	ENSPEMG00000018033	Tsr1	100	85.305	Peromyscus_maniculatus_bairdii
ENSCLAG00000005567	TSR1	100	77.792	ENSPCIG00000009357	TSR1	98	77.847	Phascolarctos_cinereus
ENSCLAG00000005567	TSR1	99	54.866	ENSPFOG00000004483	TSR1	99	55.839	Poecilia_formosa
ENSCLAG00000005567	TSR1	99	55.542	ENSPLAG00000022320	tsr1	99	55.665	Poecilia_latipinna
ENSCLAG00000005567	TSR1	99	54.796	ENSPMEG00000004577	tsr1	99	55.048	Poecilia_mexicana
ENSCLAG00000005567	TSR1	99	54.293	ENSPREG00000010354	tsr1	95	55.377	Poecilia_reticulata
ENSCLAG00000005567	TSR1	100	79.728	ENSPPYG00000007792	TSR1	100	79.604	Pongo_abelii
ENSCLAG00000005567	TSR1	53	90.698	ENSPCAG00000012973	-	72	90.698	Procavia_capensis
ENSCLAG00000005567	TSR1	100	88.682	ENSPCOG00000017928	TSR1	100	88.557	Propithecus_coquereli
ENSCLAG00000005567	TSR1	100	89.415	ENSPVAG00000002162	TSR1	100	89.415	Pteropus_vampyrus
ENSCLAG00000005567	TSR1	99	56.130	ENSPNYG00000016163	tsr1	99	55.744	Pundamilia_nyererei
ENSCLAG00000005567	TSR1	99	53.929	ENSPNAG00000008659	tsr1	99	54.132	Pygocentrus_nattereri
ENSCLAG00000005567	TSR1	100	84.701	ENSRNOG00000002980	Tsr1	100	84.701	Rattus_norvegicus
ENSCLAG00000005567	TSR1	100	87.453	ENSRBIG00000040016	TSR1	100	86.584	Rhinopithecus_bieti
ENSCLAG00000005567	TSR1	100	87.329	ENSRROG00000030361	TSR1	100	86.460	Rhinopithecus_roxellana
ENSCLAG00000005567	TSR1	96	30.429	YDL060W	-	98	30.703	Saccharomyces_cerevisiae
ENSCLAG00000005567	TSR1	100	87.422	ENSSBOG00000020785	TSR1	100	87.422	Saimiri_boliviensis_boliviensis
ENSCLAG00000005567	TSR1	100	77.047	ENSSHAG00000011394	TSR1	100	77.543	Sarcophilus_harrisii
ENSCLAG00000005567	TSR1	99	57.038	ENSSFOG00015005455	tsr1	99	57.528	Scleropages_formosus
ENSCLAG00000005567	TSR1	99	54.731	ENSSMAG00000009504	tsr1	99	56.130	Scophthalmus_maximus
ENSCLAG00000005567	TSR1	99	55.222	ENSSDUG00000012074	tsr1	99	55.342	Seriola_dumerili
ENSCLAG00000005567	TSR1	99	55.276	ENSSLDG00000002031	tsr1	99	55.475	Seriola_lalandi_dorsalis
ENSCLAG00000005567	TSR1	100	73.134	ENSSARG00000000759	TSR1	100	73.507	Sorex_araneus
ENSCLAG00000005567	TSR1	99	67.282	ENSSPUG00000007042	TSR1	99	67.528	Sphenodon_punctatus
ENSCLAG00000005567	TSR1	99	54.502	ENSSPAG00000021951	tsr1	99	55.462	Stegastes_partitus
ENSCLAG00000005567	TSR1	100	89.428	ENSSSCG00000038534	TSR1	100	89.428	Sus_scrofa
ENSCLAG00000005567	TSR1	90	71.233	ENSTGUG00000005883	TSR1	100	71.507	Taeniopygia_guttata
ENSCLAG00000005567	TSR1	99	55.273	ENSTRUG00000004665	tsr1	99	55.961	Takifugu_rubripes
ENSCLAG00000005567	TSR1	99	55.857	ENSTNIG00000016196	tsr1	99	55.897	Tetraodon_nigroviridis
ENSCLAG00000005567	TSR1	67	88.462	ENSTBEG00000015275	-	67	88.462	Tupaia_belangeri
ENSCLAG00000005567	TSR1	100	88.682	ENSTTRG00000001177	TSR1	100	88.682	Tursiops_truncatus
ENSCLAG00000005567	TSR1	100	86.946	ENSUAMG00000025160	TSR1	99	86.823	Ursus_americanus
ENSCLAG00000005567	TSR1	97	86.701	ENSUMAG00000009294	TSR1	99	85.934	Ursus_maritimus
ENSCLAG00000005567	TSR1	84	85.587	ENSVPAG00000000228	TSR1	100	85.587	Vicugna_pacos
ENSCLAG00000005567	TSR1	100	86.335	ENSVVUG00000021767	TSR1	100	86.211	Vulpes_vulpes
ENSCLAG00000005567	TSR1	99	59.191	ENSXETG00000023797	tsr1	100	60.372	Xenopus_tropicalis
ENSCLAG00000005567	TSR1	99	55.637	ENSXCOG00000009635	tsr1	99	55.882	Xiphophorus_couchianus
ENSCLAG00000005567	TSR1	99	55.114	ENSXMAG00000001397	tsr1	96	55.381	Xiphophorus_maculatus