EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000005621 (Gene tree)
Gene ID: 102013184
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 33019 bases
Position: chrJH721883.1:15245610-15278628
Accession: 102013184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008020	KH_1	PF00013.29	1.4e-69	1	4
ENSCLAP00000008020	KH_1	PF00013.29	1.4e-69	2	4
ENSCLAP00000008020	KH_1	PF00013.29	1.4e-69	3	4
ENSCLAP00000008020	KH_1	PF00013.29	1.4e-69	4	4
ENSCLAP00000008017	KH_1	PF00013.29	1.4e-69	1	4
ENSCLAP00000008017	KH_1	PF00013.29	1.4e-69	2	4
ENSCLAP00000008017	KH_1	PF00013.29	1.4e-69	3	4
ENSCLAP00000008017	KH_1	PF00013.29	1.4e-69	4	4
ENSCLAP00000008019	KH_1	PF00013.29	1.6e-69	1	4
ENSCLAP00000008019	KH_1	PF00013.29	1.6e-69	2	4
ENSCLAP00000008019	KH_1	PF00013.29	1.6e-69	3	4
ENSCLAP00000008019	KH_1	PF00013.29	1.6e-69	4	4
ENSCLAP00000008018	KH_1	PF00013.29	4.5e-17	1	1
ENSCLAP00000008020	KH_2	PF07650.17	1.5e-22	1	2
ENSCLAP00000008020	KH_2	PF07650.17	1.5e-22	2	2
ENSCLAP00000008017	KH_2	PF07650.17	1.5e-22	1	2
ENSCLAP00000008017	KH_2	PF07650.17	1.5e-22	2	2
ENSCLAP00000008019	KH_2	PF07650.17	1.7e-22	1	2
ENSCLAP00000008019	KH_2	PF07650.17	1.7e-22	2	2
ENSCLAP00000008018	KH_2	PF07650.17	6e-07	1	1
ENSCLAP00000008020	DUF1897	PF09005.10	8.9e-12	1	2
ENSCLAP00000008020	DUF1897	PF09005.10	8.9e-12	2	2
ENSCLAP00000008017	DUF1897	PF09005.10	9.1e-12	1	2
ENSCLAP00000008017	DUF1897	PF09005.10	9.1e-12	2	2
ENSCLAP00000008019	DUF1897	PF09005.10	9.7e-12	1	2
ENSCLAP00000008019	DUF1897	PF09005.10	9.7e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008137	FUBP1-201	3294	XM_005385198	ENSCLAP00000008017	644 (aa)	XP_005385255	UPI00038ED642
ENSCLAT00000008138	FUBP1-202	6681	-	ENSCLAP00000008018	156 (aa)	-	-
ENSCLAT00000008139	FUBP1-203	2073	XM_005385191	ENSCLAP00000008019	655 (aa)	XP_005385248	UPI00038EAE06
ENSCLAT00000008140	FUBP1-204	1917	-	ENSCLAP00000008020	638 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000005621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000005621	FUBP1	64	30.070	ENSCLAG00000008948	NOVA1	68	31.933
ENSCLAG00000005621	FUBP1	59	34.524	ENSCLAG00000008356	PCBP4	74	34.524
ENSCLAG00000005621	FUBP1	92	55.593	ENSCLAG00000009005	FUBP3	84	65.877
ENSCLAG00000005621	FUBP1	51	40.625	ENSCLAG00000006667	PCBP3	66	33.654
ENSCLAG00000005621	FUBP1	99	53.165	ENSCLAG00000007309	KHSRP	60	67.606

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005621	FUBP1	100	100.000	ENSG00000162613	FUBP1	100	99.389	Homo_sapiens
ENSCLAG00000005621	FUBP1	100	72.152	ENSAPOG00000014845	fubp1	70	77.060	Acanthochromis_polyacanthus
ENSCLAG00000005621	FUBP1	100	100.000	ENSAMEG00000007372	FUBP1	100	96.102	Ailuropoda_melanoleuca
ENSCLAG00000005621	FUBP1	100	72.152	ENSACIG00000020024	fubp1	69	75.737	Amphilophus_citrinellus
ENSCLAG00000005621	FUBP1	100	72.152	ENSAPEG00000012232	fubp1	72	76.638	Amphiprion_percula
ENSCLAG00000005621	FUBP1	100	71.519	ENSATEG00000018619	fubp1	70	78.194	Anabas_testudineus
ENSCLAG00000005621	FUBP1	100	96.178	ENSAPLG00000005965	FUBP1	100	97.181	Anas_platyrhynchos
ENSCLAG00000005621	FUBP1	100	95.541	ENSACAG00000006310	FUBP1	96	87.281	Anolis_carolinensis
ENSCLAG00000005621	FUBP1	100	72.152	ENSACLG00000006708	fubp1	72	78.153	Astatotilapia_calliptera
ENSCLAG00000005621	FUBP1	100	80.255	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSCLAG00000005621	FUBP1	100	100.000	ENSCJAG00000007062	FUBP1	100	99.379	Callithrix_jacchus
ENSCLAG00000005621	FUBP1	100	100.000	ENSCAFG00000020361	FUBP1	100	99.534	Canis_familiaris
ENSCLAG00000005621	FUBP1	100	99.359	ENSTSYG00000000148	FUBP1	100	98.862	Carlito_syrichta
ENSCLAG00000005621	FUBP1	58	98.901	ENSCAPG00000011052	-	67	98.901	Cavia_aperea
ENSCLAG00000005621	FUBP1	100	99.359	ENSCPOG00000002757	FUBP1	100	99.240	Cavia_porcellus
ENSCLAG00000005621	FUBP1	99	98.496	ENSCCAG00000036537	FUBP1	100	84.682	Cebus_capucinus
ENSCLAG00000005621	FUBP1	100	100.000	ENSCATG00000042126	FUBP1	100	99.379	Cercocebus_atys
ENSCLAG00000005621	FUBP1	100	100.000	ENSCSAG00000001402	FUBP1	100	99.379	Chlorocebus_sabaeus
ENSCLAG00000005621	FUBP1	100	99.237	ENSCHOG00000008177	FUBP1	100	99.237	Choloepus_hoffmanni
ENSCLAG00000005621	FUBP1	100	100.000	ENSCGRG00001007103	Fubp1	100	98.328	Cricetulus_griseus_chok1gshd
ENSCLAG00000005621	FUBP1	100	100.000	ENSCGRG00000003372	Fubp1	100	99.029	Cricetulus_griseus_crigri
ENSCLAG00000005621	FUBP1	100	72.152	ENSCSEG00000021412	fubp1	70	76.522	Cynoglossus_semilaevis
ENSCLAG00000005621	FUBP1	100	72.152	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSCLAG00000005621	FUBP1	100	74.359	ENSDARG00000029248	fubp1	70	76.774	Danio_rerio
ENSCLAG00000005621	FUBP1	83	73.077	ENSDNOG00000034565	-	82	73.750	Dasypus_novemcinctus
ENSCLAG00000005621	FUBP1	100	99.359	ENSDORG00000016534	Fubp1	100	99.084	Dipodomys_ordii
ENSCLAG00000005621	FUBP1	77	97.983	ENSETEG00000000948	-	62	97.983	Echinops_telfairi
ENSCLAG00000005621	FUBP1	95	46.771	ENSEBUG00000016143	fubp1	65	65.152	Eptatretus_burgeri
ENSCLAG00000005621	FUBP1	100	100.000	ENSEEUG00000001287	FUBP1	100	85.649	Erinaceus_europaeus
ENSCLAG00000005621	FUBP1	100	77.707	ENSELUG00000007990	fubp1	70	74.298	Esox_lucius
ENSCLAG00000005621	FUBP1	100	96.178	ENSFALG00000005768	FUBP1	69	97.357	Ficedula_albicollis
ENSCLAG00000005621	FUBP1	100	100.000	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSCLAG00000005621	FUBP1	100	72.152	ENSFHEG00000005230	fubp1	74	83.036	Fundulus_heteroclitus
ENSCLAG00000005621	FUBP1	100	66.206	ENSGMOG00000003370	fubp1	70	69.518	Gadus_morhua
ENSCLAG00000005621	FUBP1	100	96.440	ENSGALG00000008939	FUBP1	100	96.440	Gallus_gallus
ENSCLAG00000005621	FUBP1	100	72.152	ENSGAFG00000020972	fubp1	91	77.598	Gambusia_affinis
ENSCLAG00000005621	FUBP1	100	71.250	ENSGACG00000016563	fubp1	70	75.877	Gasterosteus_aculeatus
ENSCLAG00000005621	FUBP1	100	72.152	ENSHBUG00000009835	fubp1	85	79.138	Haplochromis_burtoni
ENSCLAG00000005621	FUBP1	87	92.593	ENSHGLG00000002808	-	72	91.447	Heterocephalus_glaber_female
ENSCLAG00000005621	FUBP1	100	100.000	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSCLAG00000005621	FUBP1	87	92.593	ENSHGLG00100001414	-	72	92.105	Heterocephalus_glaber_male
ENSCLAG00000005621	FUBP1	100	100.000	ENSHGLG00100003417	-	100	99.240	Heterocephalus_glaber_male
ENSCLAG00000005621	FUBP1	100	71.519	ENSHCOG00000000910	fubp1	70	74.735	Hippocampus_comes
ENSCLAG00000005621	FUBP1	100	80.255	ENSIPUG00000009896	fubp1	70	77.778	Ictalurus_punctatus
ENSCLAG00000005621	FUBP1	100	100.000	ENSSTOG00000014312	FUBP1	100	99.534	Ictidomys_tridecemlineatus
ENSCLAG00000005621	FUBP1	100	100.000	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSCLAG00000005621	FUBP1	100	72.152	ENSKMAG00000018897	fubp1	69	79.405	Kryptolebias_marmoratus
ENSCLAG00000005621	FUBP1	100	71.519	ENSLBEG00000012700	fubp1	72	75.000	Labrus_bergylta
ENSCLAG00000005621	FUBP1	96	82.781	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSCLAG00000005621	FUBP1	100	100.000	ENSLAFG00000003273	FUBP1	100	98.198	Loxodonta_africana
ENSCLAG00000005621	FUBP1	100	100.000	ENSMFAG00000031825	FUBP1	100	99.237	Macaca_fascicularis
ENSCLAG00000005621	FUBP1	100	100.000	ENSMMUG00000002899	FUBP1	100	99.379	Macaca_mulatta
ENSCLAG00000005621	FUBP1	100	100.000	ENSMNEG00000045212	FUBP1	100	99.379	Macaca_nemestrina
ENSCLAG00000005621	FUBP1	100	72.152	ENSMZEG00005024298	fubp1	70	78.384	Maylandia_zebra
ENSCLAG00000005621	FUBP1	100	96.178	ENSMGAG00000009424	FUBP1	100	96.700	Meleagris_gallopavo
ENSCLAG00000005621	FUBP1	100	99.359	ENSMAUG00000016428	Fubp1	100	98.480	Mesocricetus_auratus
ENSCLAG00000005621	FUBP1	100	100.000	ENSMOCG00000014751	Fubp1	100	98.658	Microtus_ochrogaster
ENSCLAG00000005621	FUBP1	100	70.886	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSCLAG00000005621	FUBP1	100	87.500	ENSMODG00000020804	FUBP1	100	90.881	Monodelphis_domestica
ENSCLAG00000005621	FUBP1	100	72.152	ENSMALG00000015173	fubp1	70	76.856	Monopterus_albus
ENSCLAG00000005621	FUBP1	100	100.000	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.168	Mus_caroli
ENSCLAG00000005621	FUBP1	100	99.359	ENSMUSG00000028034	Fubp1	100	97.863	Mus_musculus
ENSCLAG00000005621	FUBP1	100	100.000	MGP_PahariEiJ_G0027191	Fubp1	100	98.626	Mus_pahari
ENSCLAG00000005621	FUBP1	100	100.000	MGP_SPRETEiJ_G0026693	Fubp1	100	98.015	Mus_spretus
ENSCLAG00000005621	FUBP1	100	98.718	ENSMLUG00000014802	FUBP1	100	95.224	Myotis_lucifugus
ENSCLAG00000005621	FUBP1	100	100.000	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSCLAG00000005621	FUBP1	100	72.152	ENSNBRG00000015099	fubp1	72	78.153	Neolamprologus_brichardi
ENSCLAG00000005621	FUBP1	100	100.000	ENSNLEG00000009772	FUBP1	100	95.586	Nomascus_leucogenys
ENSCLAG00000005621	FUBP1	91	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSCLAG00000005621	FUBP1	91	97.945	ENSOPRG00000001175	FUBP1	91	97.945	Ochotona_princeps
ENSCLAG00000005621	FUBP1	100	100.000	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSCLAG00000005621	FUBP1	100	70.513	ENSODEG00000003657	-	99	66.667	Octodon_degus
ENSCLAG00000005621	FUBP1	100	72.152	ENSONIG00000018381	fubp1	69	78.384	Oreochromis_niloticus
ENSCLAG00000005621	FUBP1	100	98.718	ENSOANG00000009777	FUBP1	99	92.409	Ornithorhynchus_anatinus
ENSCLAG00000005621	FUBP1	99	68.896	ENSORLG00000003540	fubp1	71	77.753	Oryzias_latipes
ENSCLAG00000005621	FUBP1	100	69.872	ENSORLG00020005908	fubp1	70	77.477	Oryzias_latipes_hni
ENSCLAG00000005621	FUBP1	100	69.872	ENSORLG00015008779	fubp1	70	77.477	Oryzias_latipes_hsok
ENSCLAG00000005621	FUBP1	100	70.388	ENSOMEG00000021943	fubp1	70	78.719	Oryzias_melastigma
ENSCLAG00000005621	FUBP1	100	100.000	ENSOGAG00000014233	FUBP1	100	95.529	Otolemur_garnettii
ENSCLAG00000005621	FUBP1	100	100.000	ENSOARG00000013259	FUBP1	100	96.084	Ovis_aries
ENSCLAG00000005621	FUBP1	100	100.000	ENSPPRG00000000413	FUBP1	100	99.542	Panthera_pardus
ENSCLAG00000005621	FUBP1	100	100.000	ENSPTIG00000019450	FUBP1	100	99.542	Panthera_tigris_altaica
ENSCLAG00000005621	FUBP1	100	96.815	ENSPSIG00000012965	FUBP1	100	96.459	Pelodiscus_sinensis
ENSCLAG00000005621	FUBP1	100	71.154	ENSPMGG00000009060	fubp1	71	76.889	Periophthalmus_magnuspinnatus
ENSCLAG00000005621	FUBP1	100	99.359	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSCLAG00000005621	FUBP1	58	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSCLAG00000005621	FUBP1	100	72.152	ENSPLAG00000021170	fubp1	72	78.384	Poecilia_latipinna
ENSCLAG00000005621	FUBP1	100	72.152	ENSPMEG00000004747	fubp1	73	78.384	Poecilia_mexicana
ENSCLAG00000005621	FUBP1	100	72.152	ENSPREG00000017911	fubp1	70	78.384	Poecilia_reticulata
ENSCLAG00000005621	FUBP1	72	99.351	ENSPPYG00000001219	-	70	99.351	Pongo_abelii
ENSCLAG00000005621	FUBP1	100	100.000	ENSPCAG00000012617	FUBP1	100	98.931	Procavia_capensis
ENSCLAG00000005621	FUBP1	100	100.000	ENSPCOG00000024974	FUBP1	100	99.542	Propithecus_coquereli
ENSCLAG00000005621	FUBP1	100	95.115	ENSPVAG00000014637	FUBP1	100	95.115	Pteropus_vampyrus
ENSCLAG00000005621	FUBP1	100	72.152	ENSPNYG00000004552	fubp1	73	78.414	Pundamilia_nyererei
ENSCLAG00000005621	FUBP1	100	80.892	ENSPNAG00000016207	fubp1	87	77.223	Pygocentrus_nattereri
ENSCLAG00000005621	FUBP1	100	100.000	ENSRNOG00000043370	Fubp1	100	97.991	Rattus_norvegicus
ENSCLAG00000005621	FUBP1	100	100.000	ENSRBIG00000042950	FUBP1	100	99.379	Rhinopithecus_bieti
ENSCLAG00000005621	FUBP1	100	100.000	ENSRROG00000043534	FUBP1	100	99.379	Rhinopithecus_roxellana
ENSCLAG00000005621	FUBP1	100	100.000	ENSSBOG00000027299	FUBP1	100	99.534	Saimiri_boliviensis_boliviensis
ENSCLAG00000005621	FUBP1	100	98.718	ENSSHAG00000005367	FUBP1	100	98.553	Sarcophilus_harrisii
ENSCLAG00000005621	FUBP1	100	78.981	ENSSFOG00015010213	fubp1	70	79.386	Scleropages_formosus
ENSCLAG00000005621	FUBP1	100	72.152	ENSSDUG00000007383	fubp1	68	76.333	Seriola_dumerili
ENSCLAG00000005621	FUBP1	100	72.152	ENSSLDG00000022863	fubp1	72	77.629	Seriola_lalandi_dorsalis
ENSCLAG00000005621	FUBP1	100	97.133	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSCLAG00000005621	FUBP1	99	88.671	ENSSPUG00000008389	FUBP1	100	86.131	Sphenodon_punctatus
ENSCLAG00000005621	FUBP1	100	72.152	ENSSPAG00000010161	fubp1	69	77.928	Stegastes_partitus
ENSCLAG00000005621	FUBP1	100	92.638	ENSTGUG00000006841	FUBP1	100	96.059	Taeniopygia_guttata
ENSCLAG00000005621	FUBP1	100	72.436	ENSTRUG00000004615	fubp1	65	77.729	Takifugu_rubripes
ENSCLAG00000005621	FUBP1	53	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSCLAG00000005621	FUBP1	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSCLAG00000005621	FUBP1	100	100.000	ENSTTRG00000000096	FUBP1	100	99.389	Tursiops_truncatus
ENSCLAG00000005621	FUBP1	100	100.000	ENSVPAG00000004709	FUBP1	100	99.385	Vicugna_pacos
ENSCLAG00000005621	FUBP1	100	68.664	ENSXCOG00000019354	fubp1	72	77.728	Xiphophorus_couchianus
ENSCLAG00000005621	FUBP1	100	72.152	ENSXMAG00000007168	fubp1	73	78.166	Xiphophorus_maculatus