EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005622 (Gene tree)
Gene ID: 102029706
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 23652 bases
Position: chrJH721867.1:38553814-38577465
Accession: 102029706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008021	Nop52	PF05997.12	4e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008141	RRP1B-201	2416	XM_005375782	ENSCLAP00000008021	765 (aa)	XP_005375839	UPI00038EBD11

Gene Model

Click here to download ENSCLAG00000005622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005622	RRP1B	100	64.277	ENSG00000160208	RRP1B	100	64.232	Homo_sapiens
ENSCLAG00000005622	RRP1B	98	53.985	ENSAMEG00000011401	RRP1B	76	76.190	Ailuropoda_melanoleuca
ENSCLAG00000005622	RRP1B	62	51.351	ENSAOCG00000017894	-	95	51.351	Amphiprion_ocellaris
ENSCLAG00000005622	RRP1B	99	40.578	ENSACAG00000017851	RRP1B	67	50.303	Anolis_carolinensis
ENSCLAG00000005622	RRP1B	100	63.065	ENSANAG00000034889	RRP1B	100	62.861	Aotus_nancymaae
ENSCLAG00000005622	RRP1B	100	57.560	ENSBTAG00000017418	RRP1B	100	56.818	Bos_taurus
ENSCLAG00000005622	RRP1B	100	62.390	ENSCJAG00000017077	RRP1B	100	62.138	Callithrix_jacchus
ENSCLAG00000005622	RRP1B	94	59.115	ENSCAFG00000010621	RRP1B	99	58.847	Canis_familiaris
ENSCLAG00000005622	RRP1B	100	60.102	ENSCAFG00020018901	RRP1B	100	60.205	Canis_lupus_dingo
ENSCLAG00000005622	RRP1B	100	58.154	ENSCHIG00000021519	RRP1B	100	57.412	Capra_hircus
ENSCLAG00000005622	RRP1B	100	74.055	ENSCPOG00000002396	RRP1B	100	73.272	Cavia_porcellus
ENSCLAG00000005622	RRP1B	53	45.411	ENSCPOG00000038986	RRP1	74	49.704	Cavia_porcellus
ENSCLAG00000005622	RRP1B	100	62.814	ENSCCAG00000029384	RRP1B	100	62.610	Cebus_capucinus
ENSCLAG00000005622	RRP1B	100	64.151	ENSCATG00000017423	RRP1B	100	64.106	Cercocebus_atys
ENSCLAG00000005622	RRP1B	100	64.358	ENSCSAG00000007961	RRP1B	100	64.106	Chlorocebus_sabaeus
ENSCLAG00000005622	RRP1B	99	46.314	ENSCPBG00000010310	RRP1B	98	46.224	Chrysemys_picta_bellii
ENSCLAG00000005622	RRP1B	100	64.403	ENSCANG00000040952	RRP1B	100	64.358	Colobus_angolensis_palliatus
ENSCLAG00000005622	RRP1B	100	59.367	ENSCGRG00001023882	-	100	59.367	Cricetulus_griseus_chok1gshd
ENSCLAG00000005622	RRP1B	100	59.620	ENSCGRG00001010889	-	100	59.620	Cricetulus_griseus_chok1gshd
ENSCLAG00000005622	RRP1B	95	58.155	ENSCGRG00000001553	Rrp1b	97	58.155	Cricetulus_griseus_crigri
ENSCLAG00000005622	RRP1B	63	53.333	ENSCSEG00000020711	-	73	53.333	Cynoglossus_semilaevis
ENSCLAG00000005622	RRP1B	56	37.071	ENSCVAG00000017568	-	90	37.562	Cyprinodon_variegatus
ENSCLAG00000005622	RRP1B	57	44.848	ENSDARG00000103337	rrp1	58	44.848	Danio_rerio
ENSCLAG00000005622	RRP1B	100	56.730	ENSDNOG00000032774	RRP1B	100	56.801	Dasypus_novemcinctus
ENSCLAG00000005622	RRP1B	93	54.228	ENSDORG00000005496	Rrp1b	100	54.899	Dipodomys_ordii
ENSCLAG00000005622	RRP1B	100	52.141	ENSETEG00000019489	RRP1B	93	82.353	Echinops_telfairi
ENSCLAG00000005622	RRP1B	100	62.186	ENSEASG00005001687	RRP1B	100	61.935	Equus_asinus_asinus
ENSCLAG00000005622	RRP1B	100	61.750	ENSECAG00000018018	RRP1B	100	61.809	Equus_caballus
ENSCLAG00000005622	RRP1B	68	53.719	ENSELUG00000015885	-	97	42.500	Esox_lucius
ENSCLAG00000005622	RRP1B	57	45.414	ENSFCAG00000008434	RRP1	74	51.613	Felis_catus
ENSCLAG00000005622	RRP1B	100	59.288	ENSFCAG00000010272	RRP1B	100	60.051	Felis_catus
ENSCLAG00000005622	RRP1B	96	72.517	ENSFDAG00000010899	RRP1B	96	72.517	Fukomys_damarensis
ENSCLAG00000005622	RRP1B	70	51.613	ENSFHEG00000016314	-	61	51.613	Fundulus_heteroclitus
ENSCLAG00000005622	RRP1B	67	50.450	ENSGMOG00000001953	-	66	50.450	Gadus_morhua
ENSCLAG00000005622	RRP1B	100	43.140	ENSGALG00000035696	RRP1B	100	42.665	Gallus_gallus
ENSCLAG00000005622	RRP1B	100	33.548	ENSGACG00000001438	rrp1	68	48.387	Gasterosteus_aculeatus
ENSCLAG00000005622	RRP1B	100	45.746	ENSGAGG00000000375	RRP1B	100	46.552	Gopherus_agassizii
ENSCLAG00000005622	RRP1B	100	64.358	ENSGGOG00000012069	RRP1B	100	64.358	Gorilla_gorilla
ENSCLAG00000005622	RRP1B	99	76.295	ENSHGLG00000004968	RRP1B	100	76.295	Heterocephalus_glaber_female
ENSCLAG00000005622	RRP1B	91	75.798	ENSHGLG00100002232	RRP1B	99	68.889	Heterocephalus_glaber_male
ENSCLAG00000005622	RRP1B	70	46.479	ENSHCOG00000018388	-	60	46.479	Hippocampus_comes
ENSCLAG00000005622	RRP1B	59	44.737	ENSIPUG00000000673	-	69	41.989	Ictalurus_punctatus
ENSCLAG00000005622	RRP1B	99	65.375	ENSSTOG00000011790	RRP1B	96	65.473	Ictidomys_tridecemlineatus
ENSCLAG00000005622	RRP1B	60	48.413	ENSKMAG00000005539	rrp1	70	48.413	Kryptolebias_marmoratus
ENSCLAG00000005622	RRP1B	99	36.983	ENSLACG00000017332	-	99	36.862	Latimeria_chalumnae
ENSCLAG00000005622	RRP1B	100	37.531	ENSLOCG00000004064	-	100	37.330	Lepisosteus_oculatus
ENSCLAG00000005622	RRP1B	88	54.114	ENSLAFG00000000766	RRP1B	99	57.915	Loxodonta_africana
ENSCLAG00000005622	RRP1B	100	64.277	ENSMFAG00000039152	RRP1B	100	64.232	Macaca_fascicularis
ENSCLAG00000005622	RRP1B	100	62.138	ENSMMUG00000000104	RRP1B	100	62.091	Macaca_mulatta
ENSCLAG00000005622	RRP1B	100	64.151	ENSMNEG00000034269	RRP1B	100	64.106	Macaca_nemestrina
ENSCLAG00000005622	RRP1B	95	62.781	ENSMLEG00000040044	RRP1B	99	62.850	Mandrillus_leucophaeus
ENSCLAG00000005622	RRP1B	54	52.038	ENSMGAG00000014591	RRP1B	50	52.038	Meleagris_gallopavo
ENSCLAG00000005622	RRP1B	100	57.360	ENSMAUG00000021508	Rrp1b	100	57.614	Mesocricetus_auratus
ENSCLAG00000005622	RRP1B	100	65.517	ENSMICG00000004686	RRP1B	100	65.773	Microcebus_murinus
ENSCLAG00000005622	RRP1B	100	56.654	ENSMOCG00000001117	Rrp1b	100	55.429	Microtus_ochrogaster
ENSCLAG00000005622	RRP1B	55	33.254	ENSMMOG00000019175	rrp1	85	36.873	Mola_mola
ENSCLAG00000005622	RRP1B	100	55.639	ENSMODG00000021033	RRP1B	100	56.266	Monodelphis_domestica
ENSCLAG00000005622	RRP1B	52	39.401	ENSMALG00000010310	rrp1	92	39.695	Monopterus_albus
ENSCLAG00000005622	RRP1B	100	56.599	MGP_CAROLIEiJ_G0021376	Rrp1b	100	57.107	Mus_caroli
ENSCLAG00000005622	RRP1B	100	55.934	ENSMUSG00000058392	Rrp1b	100	56.131	Mus_musculus
ENSCLAG00000005622	RRP1B	100	58.122	MGP_PahariEiJ_G0023695	Rrp1b	100	58.122	Mus_pahari
ENSCLAG00000005622	RRP1B	100	57.143	MGP_SPRETEiJ_G0022290	Rrp1b	100	57.143	Mus_spretus
ENSCLAG00000005622	RRP1B	84	54.148	ENSMPUG00000009810	RRP1B	99	54.148	Mustela_putorius_furo
ENSCLAG00000005622	RRP1B	51	60.262	ENSMLUG00000017788	RRP1	77	46.939	Myotis_lucifugus
ENSCLAG00000005622	RRP1B	99	61.307	ENSMLUG00000007738	RRP1B	99	61.055	Myotis_lucifugus
ENSCLAG00000005622	RRP1B	100	60.204	ENSNGAG00000021073	Rrp1b	100	59.439	Nannospalax_galili
ENSCLAG00000005622	RRP1B	100	63.171	ENSNLEG00000001490	RRP1B	100	62.996	Nomascus_leucogenys
ENSCLAG00000005622	RRP1B	77	84.874	ENSMEUG00000003226	-	83	84.874	Notamacropus_eugenii
ENSCLAG00000005622	RRP1B	100	73.464	ENSODEG00000013177	RRP1B	100	73.464	Octodon_degus
ENSCLAG00000005622	RRP1B	99	47.103	ENSOANG00000006470	RRP1B	99	47.233	Ornithorhynchus_anatinus
ENSCLAG00000005622	RRP1B	94	51.653	ENSOCUG00000025931	RRP1B	100	51.653	Oryctolagus_cuniculus
ENSCLAG00000005622	RRP1B	64	51.613	ENSORLG00020007199	-	52	51.613	Oryzias_latipes_hni
ENSCLAG00000005622	RRP1B	70	41.728	ENSORLG00015004425	-	54	46.087	Oryzias_latipes_hsok
ENSCLAG00000005622	RRP1B	53	39.759	ENSOMEG00000016910	-	100	33.958	Oryzias_melastigma
ENSCLAG00000005622	RRP1B	84	76.860	ENSOGAG00000009872	RRP1B	89	76.860	Otolemur_garnettii
ENSCLAG00000005622	RRP1B	94	55.288	ENSOARG00000011314	RRP1B	100	54.787	Ovis_aries
ENSCLAG00000005622	RRP1B	95	62.683	ENSPPAG00000035319	RRP1B	99	62.550	Pan_paniscus
ENSCLAG00000005622	RRP1B	100	58.493	ENSPPRG00000010356	RRP1B	100	58.696	Panthera_pardus
ENSCLAG00000005622	RRP1B	75	72.857	ENSPTIG00000016894	RRP1B	89	72.857	Panthera_tigris_altaica
ENSCLAG00000005622	RRP1B	100	64.151	ENSPTRG00000013958	RRP1B	100	64.025	Pan_troglodytes
ENSCLAG00000005622	RRP1B	100	64.403	ENSPANG00000011090	RRP1B	100	64.358	Papio_anubis
ENSCLAG00000005622	RRP1B	72	51.095	ENSPKIG00000003422	-	60	51.095	Paramormyrops_kingsleyae
ENSCLAG00000005622	RRP1B	99	46.154	ENSPSIG00000008152	RRP1B	96	46.667	Pelodiscus_sinensis
ENSCLAG00000005622	RRP1B	52	34.063	ENSPMGG00000007512	-	83	37.143	Periophthalmus_magnuspinnatus
ENSCLAG00000005622	RRP1B	100	60.409	ENSPEMG00000022490	Rrp1b	100	60.281	Peromyscus_maniculatus_bairdii
ENSCLAG00000005622	RRP1B	100	57.000	ENSPCIG00000015513	RRP1B	99	75.811	Phascolarctos_cinereus
ENSCLAG00000005622	RRP1B	74	46.923	ENSPREG00000015673	-	55	46.923	Poecilia_reticulata
ENSCLAG00000005622	RRP1B	100	64.322	ENSPPYG00000011470	RRP1B	100	64.277	Pongo_abelii
ENSCLAG00000005622	RRP1B	85	87.368	ENSPCAG00000013723	RRP1B	91	87.368	Procavia_capensis
ENSCLAG00000005622	RRP1B	100	65.722	ENSPCOG00000017927	RRP1B	100	66.366	Propithecus_coquereli
ENSCLAG00000005622	RRP1B	99	54.307	ENSPVAG00000001436	RRP1B	99	55.612	Pteropus_vampyrus
ENSCLAG00000005622	RRP1B	100	59.010	ENSRNOG00000001194	Rrp1b	100	58.779	Rattus_norvegicus
ENSCLAG00000005622	RRP1B	100	61.055	ENSRBIG00000041689	RRP1B	100	60.629	Rhinopithecus_bieti
ENSCLAG00000005622	RRP1B	100	64.528	ENSRROG00000031499	RRP1B	100	64.106	Rhinopithecus_roxellana
ENSCLAG00000005622	RRP1B	94	59.435	ENSSBOG00000034727	RRP1B	99	59.640	Saimiri_boliviensis_boliviensis
ENSCLAG00000005622	RRP1B	100	56.506	ENSSHAG00000017789	RRP1B	100	57.625	Sarcophilus_harrisii
ENSCLAG00000005622	RRP1B	75	43.137	ENSSMAG00000016847	-	83	44.928	Scophthalmus_maximus
ENSCLAG00000005622	RRP1B	68	49.231	ENSSDUG00000000551	-	50	49.231	Seriola_dumerili
ENSCLAG00000005622	RRP1B	68	49.231	ENSSLDG00000002538	-	50	49.231	Seriola_lalandi_dorsalis
ENSCLAG00000005622	RRP1B	73	63.732	ENSSARG00000003108	-	78	63.732	Sorex_araneus
ENSCLAG00000005622	RRP1B	100	56.628	ENSSSCG00000021698	RRP1B	100	56.371	Sus_scrofa
ENSCLAG00000005622	RRP1B	58	48.649	ENSTNIG00000005053	rrp1	68	50.980	Tetraodon_nigroviridis
ENSCLAG00000005622	RRP1B	88	63.805	ENSTBEG00000000422	RRP1B	96	71.795	Tupaia_belangeri
ENSCLAG00000005622	RRP1B	100	57.106	ENSTTRG00000000723	RRP1B	100	57.599	Tursiops_truncatus
ENSCLAG00000005622	RRP1B	100	60.673	ENSUAMG00000026765	RRP1B	100	60.830	Ursus_americanus
ENSCLAG00000005622	RRP1B	66	76.984	ENSUMAG00000025510	RRP1B	91	76.190	Ursus_maritimus
ENSCLAG00000005622	RRP1B	94	59.383	ENSVVUG00000024509	RRP1B	99	59.115	Vulpes_vulpes
ENSCLAG00000005622	RRP1B	60	45.370	ENSXETG00000013683	rrp1b	69	46.012	Xenopus_tropicalis