EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000005685 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 1094 bases
Position: chrJH721865.1:17222134-17223227
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008110	LSM	PF01423.22	3.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008235	-	213	-	ENSCLAP00000008110	70 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000005685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000005685	-	100	80.282	ENSCLAG00000005495	LSM6	89	80.282
ENSCLAG00000005685	-	100	43.662	ENSCLAG00000007200	SNRPF	82	43.662

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005685	-	100	80.282	ENSG00000164167	LSM6	89	80.282	Homo_sapiens
ENSCLAG00000005685	-	100	77.465	ENSAPOG00000019832	lsm6	89	77.465	Acanthochromis_polyacanthus
ENSCLAG00000005685	-	100	80.282	ENSAMEG00000016671	LSM6	89	80.282	Ailuropoda_melanoleuca
ENSCLAG00000005685	-	100	77.465	ENSACIG00000016711	lsm6	89	77.465	Amphilophus_citrinellus
ENSCLAG00000005685	-	100	77.465	ENSAPEG00000023992	lsm6	92	75.714	Amphiprion_percula
ENSCLAG00000005685	-	100	77.465	ENSATEG00000012610	lsm6	89	77.465	Anabas_testudineus
ENSCLAG00000005685	-	94	82.090	ENSAPLG00000012594	LSM6	86	82.090	Anas_platyrhynchos
ENSCLAG00000005685	-	100	80.282	ENSACAG00000004004	LSM6	89	80.282	Anolis_carolinensis
ENSCLAG00000005685	-	91	72.308	ENSANAG00000021839	-	87	72.308	Aotus_nancymaae
ENSCLAG00000005685	-	100	80.282	ENSANAG00000030568	-	89	80.282	Aotus_nancymaae
ENSCLAG00000005685	-	100	77.465	ENSACLG00000025621	lsm6	89	77.465	Astatotilapia_calliptera
ENSCLAG00000005685	-	100	77.465	ENSAMXG00000038738	lsm6	89	77.465	Astyanax_mexicanus
ENSCLAG00000005685	-	100	80.282	ENSBTAG00000014060	LSM6	89	80.282	Bos_taurus
ENSCLAG00000005685	-	100	78.873	ENSBTAG00000052085	-	89	78.873	Bos_taurus
ENSCLAG00000005685	-	100	66.197	WBGene00003080	lsm-6	91	66.197	Caenorhabditis_elegans
ENSCLAG00000005685	-	100	80.282	ENSCJAG00000002482	LSM6	89	80.282	Callithrix_jacchus
ENSCLAG00000005685	-	100	80.282	ENSCAFG00000007738	LSM6	89	80.282	Canis_familiaris
ENSCLAG00000005685	-	100	80.282	ENSCAFG00020025902	LSM6	89	80.282	Canis_lupus_dingo
ENSCLAG00000005685	-	100	80.282	ENSCHIG00000010334	-	89	80.282	Capra_hircus
ENSCLAG00000005685	-	100	80.282	ENSCHIG00000012864	-	100	80.282	Capra_hircus
ENSCLAG00000005685	-	100	61.972	ENSCHIG00000024198	-	83	61.972	Capra_hircus
ENSCLAG00000005685	-	90	75.000	ENSTSYG00000012759	-	84	75.000	Carlito_syrichta
ENSCLAG00000005685	-	100	80.282	ENSTSYG00000026972	LSM6	89	80.282	Carlito_syrichta
ENSCLAG00000005685	-	100	80.282	ENSCAPG00000008104	LSM6	89	80.282	Cavia_aperea
ENSCLAG00000005685	-	91	76.923	ENSCAPG00000011179	-	100	76.923	Cavia_aperea
ENSCLAG00000005685	-	100	80.282	ENSCPOG00000032655	LSM6	89	80.282	Cavia_porcellus
ENSCLAG00000005685	-	100	78.873	ENSCCAG00000020665	-	89	78.873	Cebus_capucinus
ENSCLAG00000005685	-	100	80.282	ENSCCAG00000036437	LSM6	89	80.282	Cebus_capucinus
ENSCLAG00000005685	-	81	70.175	ENSCATG00000038799	-	75	70.175	Cercocebus_atys
ENSCLAG00000005685	-	100	80.282	ENSCATG00000002770	-	89	80.282	Cercocebus_atys
ENSCLAG00000005685	-	100	80.282	ENSCSAG00000003421	LSM6	89	80.282	Chlorocebus_sabaeus
ENSCLAG00000005685	-	86	75.000	ENSCHOG00000003420	LSM6	95	75.000	Choloepus_hoffmanni
ENSCLAG00000005685	-	100	80.282	ENSCPBG00000027472	LSM6	75	80.282	Chrysemys_picta_bellii
ENSCLAG00000005685	-	100	78.873	ENSCING00000019152	-	85	78.873	Ciona_intestinalis
ENSCLAG00000005685	-	100	80.282	ENSCSAVG00000002065	-	85	80.282	Ciona_savignyi
ENSCLAG00000005685	-	100	80.282	ENSCANG00000041263	-	89	80.282	Colobus_angolensis_palliatus
ENSCLAG00000005685	-	83	68.966	ENSCANG00000035214	-	76	68.966	Colobus_angolensis_palliatus
ENSCLAG00000005685	-	100	80.282	ENSCANG00000006849	-	89	80.282	Colobus_angolensis_palliatus
ENSCLAG00000005685	-	100	80.282	ENSCGRG00001017142	Lsm6	89	80.282	Cricetulus_griseus_chok1gshd
ENSCLAG00000005685	-	100	80.282	ENSCGRG00000008320	Lsm6	89	80.282	Cricetulus_griseus_crigri
ENSCLAG00000005685	-	100	77.465	ENSCSEG00000000423	lsm6	89	77.465	Cynoglossus_semilaevis
ENSCLAG00000005685	-	100	77.465	ENSCVAG00000001592	lsm6	89	77.465	Cyprinodon_variegatus
ENSCLAG00000005685	-	100	77.465	ENSDARG00000036995	lsm6	89	77.465	Danio_rerio
ENSCLAG00000005685	-	100	78.873	ENSDNOG00000044848	-	89	78.873	Dasypus_novemcinctus
ENSCLAG00000005685	-	97	79.710	ENSDNOG00000040186	-	74	79.710	Dasypus_novemcinctus
ENSCLAG00000005685	-	100	80.282	ENSDORG00000000933	Lsm6	89	80.282	Dipodomys_ordii
ENSCLAG00000005685	-	100	69.014	FBgn0034564	CG9344	89	69.014	Drosophila_melanogaster
ENSCLAG00000005685	-	54	79.487	ENSETEG00000013098	LSM6	81	79.487	Echinops_telfairi
ENSCLAG00000005685	-	100	80.282	ENSEBUG00000017073	lsm6	89	80.282	Eptatretus_burgeri
ENSCLAG00000005685	-	97	79.710	ENSEASG00005001533	LSM6	72	79.710	Equus_asinus_asinus
ENSCLAG00000005685	-	100	80.282	ENSECAG00000021036	LSM6	89	80.282	Equus_caballus
ENSCLAG00000005685	-	54	79.487	ENSEEUG00000002101	LSM6	50	79.487	Erinaceus_europaeus
ENSCLAG00000005685	-	100	77.465	ENSELUG00000014301	LSM6	89	77.465	Esox_lucius
ENSCLAG00000005685	-	100	80.282	ENSFCAG00000003047	LSM6	89	80.282	Felis_catus
ENSCLAG00000005685	-	100	80.282	ENSFALG00000005509	LSM6	82	80.282	Ficedula_albicollis
ENSCLAG00000005685	-	100	80.282	ENSFDAG00000020913	-	89	80.282	Fukomys_damarensis
ENSCLAG00000005685	-	100	74.648	ENSFDAG00000019073	-	89	74.648	Fukomys_damarensis
ENSCLAG00000005685	-	100	77.465	ENSFHEG00000007948	lsm6	92	76.812	Fundulus_heteroclitus
ENSCLAG00000005685	-	100	77.465	ENSGMOG00000015550	lsm6	89	77.465	Gadus_morhua
ENSCLAG00000005685	-	100	80.282	ENSGALG00000009985	LSM6	89	80.282	Gallus_gallus
ENSCLAG00000005685	-	100	77.465	ENSGAFG00000017763	lsm6	89	77.465	Gambusia_affinis
ENSCLAG00000005685	-	100	77.465	ENSGACG00000017223	lsm6	89	77.465	Gasterosteus_aculeatus
ENSCLAG00000005685	-	100	80.282	ENSGAGG00000020980	LSM6	89	80.282	Gopherus_agassizii
ENSCLAG00000005685	-	100	80.282	ENSGGOG00000001310	LSM6	89	80.282	Gorilla_gorilla
ENSCLAG00000005685	-	100	77.465	ENSHBUG00000008618	lsm6	89	77.465	Haplochromis_burtoni
ENSCLAG00000005685	-	100	80.282	ENSHGLG00000000205	LSM6	89	80.282	Heterocephalus_glaber_female
ENSCLAG00000005685	-	100	80.282	ENSHGLG00100014341	LSM6	89	80.282	Heterocephalus_glaber_male
ENSCLAG00000005685	-	100	77.465	ENSHCOG00000005591	lsm6	89	77.465	Hippocampus_comes
ENSCLAG00000005685	-	100	77.465	ENSIPUG00000004508	lsm6	89	77.465	Ictalurus_punctatus
ENSCLAG00000005685	-	100	80.282	ENSSTOG00000002678	LSM6	89	80.282	Ictidomys_tridecemlineatus
ENSCLAG00000005685	-	94	65.672	ENSJJAG00000016942	-	84	65.672	Jaculus_jaculus
ENSCLAG00000005685	-	99	72.857	ENSJJAG00000011211	-	88	72.857	Jaculus_jaculus
ENSCLAG00000005685	-	100	80.282	ENSJJAG00000013845	-	89	80.282	Jaculus_jaculus
ENSCLAG00000005685	-	100	77.465	ENSKMAG00000004105	lsm6	89	77.465	Kryptolebias_marmoratus
ENSCLAG00000005685	-	100	77.465	ENSLBEG00000018441	lsm6	89	77.465	Labrus_bergylta
ENSCLAG00000005685	-	100	80.282	ENSLACG00000006937	LSM6	89	80.282	Latimeria_chalumnae
ENSCLAG00000005685	-	100	76.056	ENSLOCG00000017683	-	89	76.056	Lepisosteus_oculatus
ENSCLAG00000005685	-	100	77.465	ENSLOCG00000008852	lsm6	89	77.465	Lepisosteus_oculatus
ENSCLAG00000005685	-	100	80.282	ENSLAFG00000001952	LSM6	89	80.282	Loxodonta_africana
ENSCLAG00000005685	-	100	80.282	ENSMFAG00000033073	LSM6	89	80.282	Macaca_fascicularis
ENSCLAG00000005685	-	100	80.282	ENSMNEG00000034820	-	89	80.282	Macaca_nemestrina
ENSCLAG00000005685	-	81	68.421	ENSMNEG00000040412	-	75	68.421	Macaca_nemestrina
ENSCLAG00000005685	-	100	80.282	ENSMLEG00000035153	LSM6	89	80.282	Mandrillus_leucophaeus
ENSCLAG00000005685	-	100	77.465	ENSMAMG00000014029	lsm6	89	77.465	Mastacembelus_armatus
ENSCLAG00000005685	-	100	77.465	ENSMZEG00005009146	lsm6	89	77.465	Maylandia_zebra
ENSCLAG00000005685	-	100	80.282	ENSMGAG00000003802	LSM6	89	80.282	Meleagris_gallopavo
ENSCLAG00000005685	-	100	80.282	ENSMAUG00000014938	Lsm6	89	80.282	Mesocricetus_auratus
ENSCLAG00000005685	-	100	81.690	ENSMICG00000047411	-	84	81.690	Microcebus_murinus
ENSCLAG00000005685	-	100	80.282	ENSMICG00000042599	LSM6	89	80.282	Microcebus_murinus
ENSCLAG00000005685	-	100	80.282	ENSMOCG00000020049	Lsm6	89	80.282	Microtus_ochrogaster
ENSCLAG00000005685	-	100	73.239	ENSMMOG00000007379	-	90	73.239	Mola_mola
ENSCLAG00000005685	-	100	77.465	ENSMMOG00000005470	lsm6	89	77.465	Mola_mola
ENSCLAG00000005685	-	100	80.282	ENSMODG00000000526	LSM6	89	80.282	Monodelphis_domestica
ENSCLAG00000005685	-	100	77.465	ENSMALG00000002419	lsm6	89	77.465	Monopterus_albus
ENSCLAG00000005685	-	100	80.282	MGP_CAROLIEiJ_G0031245	Lsm6	89	80.282	Mus_caroli
ENSCLAG00000005685	-	100	80.282	ENSMUSG00000031683	Lsm6	89	80.282	Mus_musculus
ENSCLAG00000005685	-	100	80.282	MGP_PahariEiJ_G0022851	Lsm6	89	80.282	Mus_pahari
ENSCLAG00000005685	-	100	80.282	MGP_SPRETEiJ_G0032365	Lsm6	89	80.282	Mus_spretus
ENSCLAG00000005685	-	100	80.282	ENSMPUG00000006936	LSM6	83	80.282	Mustela_putorius_furo
ENSCLAG00000005685	-	100	80.282	ENSMLUG00000026355	LSM6	89	80.282	Myotis_lucifugus
ENSCLAG00000005685	-	100	80.282	ENSNGAG00000019116	Lsm6	89	80.282	Nannospalax_galili
ENSCLAG00000005685	-	100	77.465	ENSNBRG00000004887	lsm6	89	77.465	Neolamprologus_brichardi
ENSCLAG00000005685	-	100	80.282	ENSNLEG00000005584	LSM6	89	80.282	Nomascus_leucogenys
ENSCLAG00000005685	-	99	80.000	ENSOPRG00000011199	LSM6	89	80.000	Ochotona_princeps
ENSCLAG00000005685	-	100	78.873	ENSODEG00000019419	-	89	78.873	Octodon_degus
ENSCLAG00000005685	-	100	78.873	ENSODEG00000002307	-	89	78.873	Octodon_degus
ENSCLAG00000005685	-	100	77.465	ENSODEG00000020420	-	89	77.465	Octodon_degus
ENSCLAG00000005685	-	100	76.056	ENSODEG00000018684	-	92	76.056	Octodon_degus
ENSCLAG00000005685	-	100	77.465	ENSONIG00000010005	lsm6	89	77.465	Oreochromis_niloticus
ENSCLAG00000005685	-	93	56.061	ENSOANG00000006895	-	87	56.061	Ornithorhynchus_anatinus
ENSCLAG00000005685	-	93	56.061	ENSOANG00000006894	-	87	56.061	Ornithorhynchus_anatinus
ENSCLAG00000005685	-	100	77.465	ENSORLG00000024158	lsm6	89	77.465	Oryzias_latipes
ENSCLAG00000005685	-	100	77.465	ENSORLG00020017383	lsm6	89	77.465	Oryzias_latipes_hni
ENSCLAG00000005685	-	100	77.465	ENSORLG00015016903	lsm6	89	77.465	Oryzias_latipes_hsok
ENSCLAG00000005685	-	100	77.465	ENSOMEG00000000074	lsm6	89	77.465	Oryzias_melastigma
ENSCLAG00000005685	-	100	80.282	ENSOGAG00000033153	-	89	80.282	Otolemur_garnettii
ENSCLAG00000005685	-	100	80.282	ENSOGAG00000026665	-	89	80.282	Otolemur_garnettii
ENSCLAG00000005685	-	97	79.710	ENSOARG00000008509	-	88	79.710	Ovis_aries
ENSCLAG00000005685	-	100	74.648	ENSOARG00000011641	-	83	74.648	Ovis_aries
ENSCLAG00000005685	-	100	80.282	ENSPPAG00000037929	LSM6	89	80.282	Pan_paniscus
ENSCLAG00000005685	-	100	80.282	ENSPPRG00000012806	LSM6	89	80.282	Panthera_pardus
ENSCLAG00000005685	-	100	80.282	ENSPTIG00000019769	LSM6	89	80.282	Panthera_tigris_altaica
ENSCLAG00000005685	-	100	80.282	ENSPTRG00000016488	LSM6	89	80.282	Pan_troglodytes
ENSCLAG00000005685	-	100	80.282	ENSPANG00000006552	LSM6	89	80.282	Papio_anubis
ENSCLAG00000005685	-	100	77.465	ENSPKIG00000016176	lsm6	89	77.465	Paramormyrops_kingsleyae
ENSCLAG00000005685	-	100	80.282	ENSPSIG00000016942	LSM6	89	80.282	Pelodiscus_sinensis
ENSCLAG00000005685	-	100	77.465	ENSPMGG00000018004	lsm6	89	77.465	Periophthalmus_magnuspinnatus
ENSCLAG00000005685	-	100	80.282	ENSPEMG00000012410	Lsm6	89	80.282	Peromyscus_maniculatus_bairdii
ENSCLAG00000005685	-	100	80.282	ENSPMAG00000006949	lsm6	89	80.282	Petromyzon_marinus
ENSCLAG00000005685	-	100	80.282	ENSPCIG00000023469	LSM6	80	79.710	Phascolarctos_cinereus
ENSCLAG00000005685	-	100	77.465	ENSPFOG00000008881	lsm6	89	77.465	Poecilia_formosa
ENSCLAG00000005685	-	100	77.465	ENSPLAG00000003202	lsm6	89	77.465	Poecilia_latipinna
ENSCLAG00000005685	-	100	77.465	ENSPMEG00000004000	lsm6	89	77.465	Poecilia_mexicana
ENSCLAG00000005685	-	100	77.465	ENSPREG00000023235	lsm6	89	77.465	Poecilia_reticulata
ENSCLAG00000005685	-	100	80.282	ENSPPYG00000015105	LSM6	89	80.282	Pongo_abelii
ENSCLAG00000005685	-	100	80.282	ENSPCOG00000013899	LSM6	89	80.282	Propithecus_coquereli
ENSCLAG00000005685	-	100	77.465	ENSPNYG00000012614	lsm6	89	77.465	Pundamilia_nyererei
ENSCLAG00000005685	-	100	77.465	ENSPNAG00000018779	lsm6	89	77.465	Pygocentrus_nattereri
ENSCLAG00000005685	-	100	80.282	ENSRNOG00000049370	LOC100360750	89	80.282	Rattus_norvegicus
ENSCLAG00000005685	-	100	80.282	ENSRNOG00000030374	Lsm6	89	80.282	Rattus_norvegicus
ENSCLAG00000005685	-	100	80.282	ENSRBIG00000027878	LSM6	89	80.282	Rhinopithecus_bieti
ENSCLAG00000005685	-	100	80.282	ENSRROG00000024868	LSM6	89	80.282	Rhinopithecus_roxellana
ENSCLAG00000005685	-	63	40.909	YDR378C	-	79	32.353	Saccharomyces_cerevisiae
ENSCLAG00000005685	-	100	80.282	ENSSBOG00000021229	-	89	80.282	Saimiri_boliviensis_boliviensis
ENSCLAG00000005685	-	100	63.380	ENSSBOG00000028103	-	87	63.380	Saimiri_boliviensis_boliviensis
ENSCLAG00000005685	-	100	77.465	ENSSFOG00015016480	lsm6	89	77.465	Scleropages_formosus
ENSCLAG00000005685	-	100	77.465	ENSSMAG00000004550	lsm6	92	76.056	Scophthalmus_maximus
ENSCLAG00000005685	-	100	77.465	ENSSLDG00000020533	lsm6	74	77.465	Seriola_lalandi_dorsalis
ENSCLAG00000005685	-	97	76.812	ENSSLDG00000004136	-	59	76.812	Seriola_lalandi_dorsalis
ENSCLAG00000005685	-	54	79.487	ENSSARG00000000689	LSM6	81	79.487	Sorex_araneus
ENSCLAG00000005685	-	100	80.282	ENSSPUG00000008657	LSM6	89	80.282	Sphenodon_punctatus
ENSCLAG00000005685	-	100	77.465	ENSSPAG00000003246	lsm6	89	77.465	Stegastes_partitus
ENSCLAG00000005685	-	100	80.282	ENSSSCG00000035973	LSM6	89	80.282	Sus_scrofa
ENSCLAG00000005685	-	100	80.282	ENSTGUG00000002663	LSM6	89	80.282	Taeniopygia_guttata
ENSCLAG00000005685	-	100	77.465	ENSTRUG00000023398	lsm6	89	77.465	Takifugu_rubripes
ENSCLAG00000005685	-	100	77.465	ENSTNIG00000017725	lsm6	89	77.465	Tetraodon_nigroviridis
ENSCLAG00000005685	-	100	80.282	ENSTTRG00000004609	LSM6	89	80.282	Tursiops_truncatus
ENSCLAG00000005685	-	97	79.710	ENSUAMG00000014213	LSM6	57	79.710	Ursus_americanus
ENSCLAG00000005685	-	97	79.710	ENSUMAG00000015727	LSM6	57	79.710	Ursus_maritimus
ENSCLAG00000005685	-	100	80.282	ENSVPAG00000006922	LSM6	89	80.282	Vicugna_pacos
ENSCLAG00000005685	-	100	80.282	ENSVVUG00000009254	LSM6	61	80.282	Vulpes_vulpes
ENSCLAG00000005685	-	100	80.282	ENSXETG00000023683	lsm6	89	80.282	Xenopus_tropicalis
ENSCLAG00000005685	-	100	77.465	ENSXMAG00000009606	lsm6	90	76.812	Xiphophorus_maculatus