EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000005721 (Gene tree)
Gene ID: 102010127
Gene Symbol: -
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 11075 bases
Position: chrJH721916.1:8771576-8782650
Accession: 102010127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008158	SBDS	PF01172.18	5.3e-33	1	1
ENSCLAP00000008158	SBDS_C	PF09377.10	3.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008284	-	3590	XM_005396725	ENSCLAP00000008158	250 (aa)	XP_005396782	UPI00038EEBCF

Gene Model

Click here to download ENSCLAG00000005721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000005721	-	99	72.177	ENSCLAG00000002113	-	99	72.177

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005721	-	100	98.000	ENSG00000126524	SBDS	100	98.000	Homo_sapiens
ENSCLAG00000005721	-	99	84.337	ENSAPOG00000014285	sbds	100	84.337	Acanthochromis_polyacanthus
ENSCLAG00000005721	-	100	97.600	ENSAMEG00000018167	SBDS	100	97.600	Ailuropoda_melanoleuca
ENSCLAG00000005721	-	99	84.127	ENSACIG00000007308	sbds	100	84.127	Amphilophus_citrinellus
ENSCLAG00000005721	-	99	84.337	ENSAOCG00000016770	sbds	100	84.337	Amphiprion_ocellaris
ENSCLAG00000005721	-	99	84.739	ENSAPEG00000015897	sbds	100	84.739	Amphiprion_percula
ENSCLAG00000005721	-	99	84.739	ENSATEG00000006901	sbds	100	84.739	Anabas_testudineus
ENSCLAG00000005721	-	92	90.909	ENSANAG00000024342	-	97	90.909	Aotus_nancymaae
ENSCLAG00000005721	-	83	97.101	ENSANAG00000037501	-	100	97.101	Aotus_nancymaae
ENSCLAG00000005721	-	99	85.542	ENSACLG00000018750	sbds	100	85.542	Astatotilapia_calliptera
ENSCLAG00000005721	-	100	85.600	ENSAMXG00000005361	sbds	100	85.600	Astyanax_mexicanus
ENSCLAG00000005721	-	100	98.400	ENSBTAG00000004051	SBDS	100	98.400	Bos_taurus
ENSCLAG00000005721	-	98	58.537	WBGene00021063	sbds-1	97	58.537	Caenorhabditis_elegans
ENSCLAG00000005721	-	100	97.600	ENSCJAG00000041007	SBDS	100	97.600	Callithrix_jacchus
ENSCLAG00000005721	-	100	94.841	ENSCAFG00000010797	SBDS	100	94.841	Canis_familiaris
ENSCLAG00000005721	-	100	97.200	ENSCAFG00020005357	SBDS	100	97.200	Canis_lupus_dingo
ENSCLAG00000005721	-	100	98.400	ENSCHIG00000026854	SBDS	100	98.400	Capra_hircus
ENSCLAG00000005721	-	100	98.000	ENSTSYG00000033822	SBDS	100	98.000	Carlito_syrichta
ENSCLAG00000005721	-	66	99.390	ENSCAPG00000006634	SBDS	100	99.390	Cavia_aperea
ENSCLAG00000005721	-	100	99.600	ENSCPOG00000036143	SBDS	100	99.600	Cavia_porcellus
ENSCLAG00000005721	-	100	97.600	ENSCCAG00000020671	SBDS	100	97.600	Cebus_capucinus
ENSCLAG00000005721	-	100	98.000	ENSCATG00000039026	SBDS	100	98.000	Cercocebus_atys
ENSCLAG00000005721	-	100	98.000	ENSCSAG00000018275	SBDS	100	98.000	Chlorocebus_sabaeus
ENSCLAG00000005721	-	100	93.600	ENSCHOG00000003795	SBDS	100	93.600	Choloepus_hoffmanni
ENSCLAG00000005721	-	100	90.400	ENSCPBG00000014893	SBDS	100	90.400	Chrysemys_picta_bellii
ENSCLAG00000005721	-	99	68.000	ENSCSAVG00000011811	-	100	68.000	Ciona_savignyi
ENSCLAG00000005721	-	100	97.600	ENSCANG00000032368	SBDS	100	97.600	Colobus_angolensis_palliatus
ENSCLAG00000005721	-	66	95.732	ENSCGRG00001019886	Sbds	100	95.732	Cricetulus_griseus_chok1gshd
ENSCLAG00000005721	-	83	96.618	ENSCGRG00000009211	Sbds	100	96.618	Cricetulus_griseus_crigri
ENSCLAG00000005721	-	99	82.731	ENSCSEG00000005798	sbds	100	82.731	Cynoglossus_semilaevis
ENSCLAG00000005721	-	99	83.133	ENSCVAG00000001053	sbds	100	83.133	Cyprinodon_variegatus
ENSCLAG00000005721	-	100	85.200	ENSDARG00000027803	sbds	100	85.200	Danio_rerio
ENSCLAG00000005721	-	100	97.600	ENSDNOG00000041174	SBDS	100	97.600	Dasypus_novemcinctus
ENSCLAG00000005721	-	100	96.400	ENSDORG00000026218	Sbds	100	96.400	Dipodomys_ordii
ENSCLAG00000005721	-	90	59.211	FBgn0035714	CG8549	99	59.438	Drosophila_melanogaster
ENSCLAG00000005721	-	93	59.227	ENSEBUG00000015780	sbds	100	59.227	Eptatretus_burgeri
ENSCLAG00000005721	-	100	98.400	ENSEASG00005008821	SBDS	100	98.400	Equus_asinus_asinus
ENSCLAG00000005721	-	100	98.400	ENSECAG00000008202	SBDS	100	98.400	Equus_caballus
ENSCLAG00000005721	-	83	75.000	ENSEEUG00000004768	SBDS	100	75.000	Erinaceus_europaeus
ENSCLAG00000005721	-	100	83.600	ENSELUG00000008382	sbds	100	83.600	Esox_lucius
ENSCLAG00000005721	-	100	98.000	ENSFCAG00000022142	SBDS	100	98.000	Felis_catus
ENSCLAG00000005721	-	100	90.800	ENSFALG00000013808	SBDS	100	90.800	Ficedula_albicollis
ENSCLAG00000005721	-	100	99.600	ENSFDAG00000018947	-	100	99.600	Fukomys_damarensis
ENSCLAG00000005721	-	99	79.920	ENSFHEG00000000708	sbds	100	79.920	Fundulus_heteroclitus
ENSCLAG00000005721	-	100	84.400	ENSGMOG00000018356	sbds	99	84.400	Gadus_morhua
ENSCLAG00000005721	-	100	90.000	ENSGALG00000027989	SBDS	100	90.000	Gallus_gallus
ENSCLAG00000005721	-	92	80.000	ENSGAFG00000014204	sbds	100	80.000	Gambusia_affinis
ENSCLAG00000005721	-	99	83.534	ENSGACG00000012697	sbds	100	83.534	Gasterosteus_aculeatus
ENSCLAG00000005721	-	86	90.654	ENSGAGG00000022402	SBDS	100	90.654	Gopherus_agassizii
ENSCLAG00000005721	-	96	78.008	ENSGGOG00000040023	-	92	78.008	Gorilla_gorilla
ENSCLAG00000005721	-	99	85.542	ENSHBUG00000002660	sbds	100	85.542	Haplochromis_burtoni
ENSCLAG00000005721	-	100	98.000	ENSHGLG00000009671	SBDS	100	98.000	Heterocephalus_glaber_female
ENSCLAG00000005721	-	100	98.000	ENSHGLG00100011332	SBDS	100	98.000	Heterocephalus_glaber_male
ENSCLAG00000005721	-	99	81.124	ENSHCOG00000018606	sbds	100	81.124	Hippocampus_comes
ENSCLAG00000005721	-	100	86.400	ENSIPUG00000006536	sbds	100	86.400	Ictalurus_punctatus
ENSCLAG00000005721	-	100	94.000	ENSJJAG00000012033	-	100	94.000	Jaculus_jaculus
ENSCLAG00000005721	-	100	70.356	ENSJJAG00000003934	-	100	70.356	Jaculus_jaculus
ENSCLAG00000005721	-	99	84.739	ENSKMAG00000018542	sbds	100	84.739	Kryptolebias_marmoratus
ENSCLAG00000005721	-	99	81.928	ENSLBEG00000016687	sbds	100	81.928	Labrus_bergylta
ENSCLAG00000005721	-	100	70.866	ENSLACG00000018916	SBDS	100	70.866	Latimeria_chalumnae
ENSCLAG00000005721	-	100	88.800	ENSLOCG00000004073	sbds	100	88.800	Lepisosteus_oculatus
ENSCLAG00000005721	-	100	96.400	ENSLAFG00000008763	SBDS	100	96.400	Loxodonta_africana
ENSCLAG00000005721	-	100	98.000	ENSMFAG00000032620	SBDS	100	98.000	Macaca_fascicularis
ENSCLAG00000005721	-	100	98.000	ENSMMUG00000045653	SBDS	100	98.000	Macaca_mulatta
ENSCLAG00000005721	-	100	98.000	ENSMNEG00000031523	SBDS	100	98.000	Macaca_nemestrina
ENSCLAG00000005721	-	100	74.409	ENSMLEG00000036826	SBDS	100	74.409	Mandrillus_leucophaeus
ENSCLAG00000005721	-	99	84.337	ENSMAMG00000016062	sbds	100	84.337	Mastacembelus_armatus
ENSCLAG00000005721	-	99	85.542	ENSMZEG00005024385	sbds	100	85.542	Maylandia_zebra
ENSCLAG00000005721	-	100	90.000	ENSMGAG00000002119	SBDS	100	90.000	Meleagris_gallopavo
ENSCLAG00000005721	-	99	77.510	ENSMAUG00000022214	-	100	77.510	Mesocricetus_auratus
ENSCLAG00000005721	-	100	98.400	ENSMICG00000014366	SBDS	100	98.400	Microcebus_murinus
ENSCLAG00000005721	-	100	98.000	ENSMOCG00000011739	Sbds	100	98.000	Microtus_ochrogaster
ENSCLAG00000005721	-	99	74.400	ENSMMOG00000005061	sbds	100	74.000	Mola_mola
ENSCLAG00000005721	-	100	96.400	ENSMODG00000006644	SBDS	100	96.400	Monodelphis_domestica
ENSCLAG00000005721	-	99	84.337	ENSMALG00000010219	sbds	100	84.337	Monopterus_albus
ENSCLAG00000005721	-	100	98.000	MGP_CAROLIEiJ_G0027800	Sbds	100	98.000	Mus_caroli
ENSCLAG00000005721	-	100	97.600	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSCLAG00000005721	-	100	97.600	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSCLAG00000005721	-	100	97.600	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSCLAG00000005721	-	67	92.262	ENSMPUG00000016192	SBDS	97	92.262	Mustela_putorius_furo
ENSCLAG00000005721	-	73	95.055	ENSMLUG00000013575	SBDS	100	95.055	Myotis_lucifugus
ENSCLAG00000005721	-	100	98.000	ENSNGAG00000012093	Sbds	100	98.000	Nannospalax_galili
ENSCLAG00000005721	-	99	85.542	ENSNBRG00000017027	sbds	100	85.542	Neolamprologus_brichardi
ENSCLAG00000005721	-	100	98.000	ENSNLEG00000013288	SBDS	100	98.000	Nomascus_leucogenys
ENSCLAG00000005721	-	100	97.200	ENSOPRG00000008721	SBDS	100	97.200	Ochotona_princeps
ENSCLAG00000005721	-	99	73.494	ENSODEG00000000137	-	85	76.800	Octodon_degus
ENSCLAG00000005721	-	99	77.510	ENSODEG00000001116	-	99	77.510	Octodon_degus
ENSCLAG00000005721	-	100	89.200	ENSODEG00000019253	-	84	89.200	Octodon_degus
ENSCLAG00000005721	-	99	84.739	ENSONIG00000005874	sbds	100	84.739	Oreochromis_niloticus
ENSCLAG00000005721	-	83	90.821	ENSOANG00000007674	-	100	90.821	Ornithorhynchus_anatinus
ENSCLAG00000005721	-	100	98.000	ENSOCUG00000003170	SBDS	100	98.000	Oryctolagus_cuniculus
ENSCLAG00000005721	-	99	81.928	ENSORLG00000023489	sbds	100	81.928	Oryzias_latipes
ENSCLAG00000005721	-	99	81.526	ENSORLG00020019282	sbds	100	81.526	Oryzias_latipes_hni
ENSCLAG00000005721	-	99	81.526	ENSORLG00015008005	sbds	100	81.526	Oryzias_latipes_hsok
ENSCLAG00000005721	-	99	82.329	ENSOMEG00000022747	sbds	100	82.329	Oryzias_melastigma
ENSCLAG00000005721	-	100	98.000	ENSOGAG00000009011	-	100	98.000	Otolemur_garnettii
ENSCLAG00000005721	-	100	81.600	ENSOGAG00000015036	-	100	81.600	Otolemur_garnettii
ENSCLAG00000005721	-	100	98.400	ENSOARG00000010609	SBDS	100	98.400	Ovis_aries
ENSCLAG00000005721	-	100	97.200	ENSPPAG00000043889	-	100	97.200	Pan_paniscus
ENSCLAG00000005721	-	100	98.000	ENSPPRG00000002307	SBDS	100	98.000	Panthera_pardus
ENSCLAG00000005721	-	100	98.000	ENSPTIG00000021308	SBDS	100	98.000	Panthera_tigris_altaica
ENSCLAG00000005721	-	100	83.200	ENSPTRG00000050835	-	100	83.200	Pan_troglodytes
ENSCLAG00000005721	-	100	98.000	ENSPTRG00000019254	SBDS	100	98.000	Pan_troglodytes
ENSCLAG00000005721	-	100	82.800	ENSPTRG00000047744	-	100	82.800	Pan_troglodytes
ENSCLAG00000005721	-	87	95.392	ENSPTRG00000048174	-	96	95.392	Pan_troglodytes
ENSCLAG00000005721	-	100	97.600	ENSPANG00000004078	SBDS	100	97.600	Papio_anubis
ENSCLAG00000005721	-	100	85.600	ENSPKIG00000006489	sbds	100	85.600	Paramormyrops_kingsleyae
ENSCLAG00000005721	-	83	91.304	ENSPSIG00000014603	SBDS	99	91.304	Pelodiscus_sinensis
ENSCLAG00000005721	-	99	83.133	ENSPMGG00000004246	sbds	100	83.133	Periophthalmus_magnuspinnatus
ENSCLAG00000005721	-	100	97.600	ENSPEMG00000008728	Sbds	100	97.600	Peromyscus_maniculatus_bairdii
ENSCLAG00000005721	-	100	94.800	ENSPCIG00000029718	SBDS	100	94.800	Phascolarctos_cinereus
ENSCLAG00000005721	-	99	82.329	ENSPFOG00000015837	sbds	100	82.329	Poecilia_formosa
ENSCLAG00000005721	-	99	82.329	ENSPLAG00000003641	sbds	100	82.329	Poecilia_latipinna
ENSCLAG00000005721	-	99	82.329	ENSPMEG00000019483	sbds	100	82.329	Poecilia_mexicana
ENSCLAG00000005721	-	99	81.928	ENSPREG00000018758	sbds	100	81.928	Poecilia_reticulata
ENSCLAG00000005721	-	100	98.000	ENSPPYG00000017513	SBDS	100	98.000	Pongo_abelii
ENSCLAG00000005721	-	100	98.400	ENSPCOG00000021098	SBDS	100	98.400	Propithecus_coquereli
ENSCLAG00000005721	-	100	98.000	ENSPVAG00000009369	SBDS	100	98.000	Pteropus_vampyrus
ENSCLAG00000005721	-	99	85.141	ENSPNYG00000022403	sbds	100	85.141	Pundamilia_nyererei
ENSCLAG00000005721	-	100	86.400	ENSPNAG00000001120	sbds	100	86.400	Pygocentrus_nattereri
ENSCLAG00000005721	-	100	97.600	ENSRNOG00000000888	Sbds	100	97.600	Rattus_norvegicus
ENSCLAG00000005721	-	100	98.000	ENSRBIG00000035557	SBDS	100	98.000	Rhinopithecus_bieti
ENSCLAG00000005721	-	100	98.000	ENSRROG00000040842	-	100	98.000	Rhinopithecus_roxellana
ENSCLAG00000005721	-	100	80.000	ENSRROG00000041986	-	100	78.000	Rhinopithecus_roxellana
ENSCLAG00000005721	-	96	44.082	YLR022C	-	96	43.320	Saccharomyces_cerevisiae
ENSCLAG00000005721	-	93	96.983	ENSSBOG00000022460	SBDS	100	96.983	Saimiri_boliviensis_boliviensis
ENSCLAG00000005721	-	100	82.800	ENSSHAG00000010263	SBDS	100	82.800	Sarcophilus_harrisii
ENSCLAG00000005721	-	100	86.800	ENSSFOG00015001108	sbds	100	86.800	Scleropages_formosus
ENSCLAG00000005721	-	99	85.141	ENSSMAG00000020506	sbds	100	85.141	Scophthalmus_maximus
ENSCLAG00000005721	-	99	83.936	ENSSDUG00000001528	sbds	100	83.936	Seriola_dumerili
ENSCLAG00000005721	-	99	84.337	ENSSLDG00000003659	sbds	100	84.337	Seriola_lalandi_dorsalis
ENSCLAG00000005721	-	73	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSCLAG00000005721	-	61	97.386	ENSSARG00000013132	-	100	97.386	Sorex_araneus
ENSCLAG00000005721	-	100	87.600	ENSSPUG00000002699	SBDS	100	87.600	Sphenodon_punctatus
ENSCLAG00000005721	-	99	84.337	ENSSPAG00000016419	sbds	100	76.800	Stegastes_partitus
ENSCLAG00000005721	-	100	98.000	ENSSSCG00000007732	SBDS	100	98.000	Sus_scrofa
ENSCLAG00000005721	-	66	91.515	ENSTGUG00000003426	SBDS	99	91.515	Taeniopygia_guttata
ENSCLAG00000005721	-	99	84.337	ENSTRUG00000021443	sbds	100	84.337	Takifugu_rubripes
ENSCLAG00000005721	-	99	83.133	ENSTNIG00000019000	sbds	100	83.133	Tetraodon_nigroviridis
ENSCLAG00000005721	-	83	83.654	ENSTBEG00000001178	SBDS	100	83.654	Tupaia_belangeri
ENSCLAG00000005721	-	100	78.400	ENSTTRG00000003921	SBDS	100	78.400	Tursiops_truncatus
ENSCLAG00000005721	-	100	97.600	ENSUAMG00000001326	SBDS	100	97.600	Ursus_americanus
ENSCLAG00000005721	-	100	97.600	ENSUMAG00000015353	SBDS	100	97.600	Ursus_maritimus
ENSCLAG00000005721	-	100	97.200	ENSVVUG00000016478	SBDS	100	97.200	Vulpes_vulpes
ENSCLAG00000005721	-	100	86.800	ENSXETG00000010093	sbds	100	86.800	Xenopus_tropicalis
ENSCLAG00000005721	-	99	74.699	ENSXCOG00000010639	sbds	100	74.699	Xiphophorus_couchianus
ENSCLAG00000005721	-	99	82.731	ENSXMAG00000006065	sbds	100	82.731	Xiphophorus_maculatus