EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000005801 (Gene tree)
Gene ID: 102019729
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 11383 bases
Position: chrJH721895.1:12162730-12174112
Accession: 102019729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008273	PRP38	PF03371.15	1.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008400	-	5651	XM_005388832	ENSCLAP00000008273	548 (aa)	XP_005388889	UPI00038EA47C

Gene Model

Click here to download ENSCLAG00000005801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005801	-	80	64.474	ENSATEG00000014482	-	59	83.577	Anabas_testudineus
ENSCLAG00000005801	-	100	94.526	ENSBTAG00000047874	PRPF38B	100	94.161	Bos_taurus
ENSCLAG00000005801	-	100	80.874	ENSCAFG00020010992	-	100	81.603	Canis_lupus_dingo
ENSCLAG00000005801	-	100	94.526	ENSCHIG00000024357	-	100	94.161	Capra_hircus
ENSCLAG00000005801	-	80	95.872	ENSCAPG00000009606	-	100	95.872	Cavia_aperea
ENSCLAG00000005801	-	100	97.628	ENSCPOG00000039545	-	100	97.628	Cavia_porcellus
ENSCLAG00000005801	-	65	84.746	ENSCHOG00000008972	-	94	81.845	Choloepus_hoffmanni
ENSCLAG00000005801	-	100	85.560	ENSCPBG00000028299	-	100	85.636	Chrysemys_picta_bellii
ENSCLAG00000005801	-	91	60.990	ENSCSEG00000015030	-	59	81.752	Cynoglossus_semilaevis
ENSCLAG00000005801	-	82	92.699	ENSETEG00000014690	-	73	94.801	Echinops_telfairi
ENSCLAG00000005801	-	96	49.658	ENSELUG00000010390	-	50	80.224	Esox_lucius
ENSCLAG00000005801	-	83	86.245	ENSFALG00000002673	-	88	87.061	Ficedula_albicollis
ENSCLAG00000005801	-	94	57.786	ENSGMOG00000012080	-	58	81.752	Gadus_morhua
ENSCLAG00000005801	-	100	86.257	ENSGALG00000001972	-	100	85.455	Gallus_gallus
ENSCLAG00000005801	-	82	62.179	ENSGAFG00000008943	-	59	84.364	Gambusia_affinis
ENSCLAG00000005801	-	100	85.740	ENSGAGG00000001563	-	100	85.818	Gopherus_agassizii
ENSCLAG00000005801	-	100	98.543	ENSHGLG00000016583	PRPF38B	100	98.543	Heterocephalus_glaber_female
ENSCLAG00000005801	-	100	98.361	ENSHGLG00100015525	-	100	98.361	Heterocephalus_glaber_male
ENSCLAG00000005801	-	83	63.368	ENSHCOG00000001071	-	60	83.212	Hippocampus_comes
ENSCLAG00000005801	-	80	61.002	ENSKMAG00000005540	-	57	82.222	Kryptolebias_marmoratus
ENSCLAG00000005801	-	97	73.779	ENSLACG00000015511	-	50	91.882	Latimeria_chalumnae
ENSCLAG00000005801	-	100	89.781	ENSMOCG00000020285	-	100	90.328	Microtus_ochrogaster
ENSCLAG00000005801	-	83	60.499	ENSMMOG00000011639	-	59	82.482	Mola_mola
ENSCLAG00000005801	-	60	95.482	ENSMODG00000002350	-	100	92.572	Monodelphis_domestica
ENSCLAG00000005801	-	82	63.136	ENSMALG00000019479	-	59	83.942	Monopterus_albus
ENSCLAG00000005801	-	80	94.624	ENSOPRG00000013543	-	81	95.455	Ochotona_princeps
ENSCLAG00000005801	-	82	65.096	ENSONIG00000010129	-	59	83.942	Oreochromis_niloticus
ENSCLAG00000005801	-	91	83.529	ENSOANG00000007343	-	95	90.578	Ornithorhynchus_anatinus
ENSCLAG00000005801	-	83	63.270	ENSORLG00000015621	-	87	92.763	Oryzias_latipes
ENSCLAG00000005801	-	83	63.270	ENSORLG00020016276	-	87	92.763	Oryzias_latipes_hni
ENSCLAG00000005801	-	81	64.706	ENSORLG00015016270	-	71	94.558	Oryzias_latipes_hsok
ENSCLAG00000005801	-	83	63.694	ENSOMEG00000022050	-	87	93.960	Oryzias_melastigma
ENSCLAG00000005801	-	100	94.900	ENSOGAG00000027048	-	100	95.082	Otolemur_garnettii
ENSCLAG00000005801	-	100	92.701	ENSOARG00000018899	-	100	91.971	Ovis_aries
ENSCLAG00000005801	-	97	63.284	ENSPKIG00000004815	-	57	82.026	Paramormyrops_kingsleyae
ENSCLAG00000005801	-	100	84.477	ENSPSIG00000016569	-	100	85.091	Pelodiscus_sinensis
ENSCLAG00000005801	-	82	62.821	ENSPFOG00000004025	-	78	95.238	Poecilia_formosa
ENSCLAG00000005801	-	82	62.821	ENSPLAG00000019842	-	59	84.727	Poecilia_latipinna
ENSCLAG00000005801	-	83	62.105	ENSPMEG00000004807	-	57	84.727	Poecilia_mexicana
ENSCLAG00000005801	-	82	61.966	ENSPREG00000015599	-	80	95.238	Poecilia_reticulata
ENSCLAG00000005801	-	51	84.342	ENSPNAG00000017484	-	53	85.662	Pygocentrus_nattereri
ENSCLAG00000005801	-	100	91.423	ENSRNOG00000020438	Prpf38b	100	90.693	Rattus_norvegicus
ENSCLAG00000005801	-	94	61.279	ENSSFOG00015011251	-	79	97.351	Scleropages_formosus
ENSCLAG00000005801	-	83	63.333	ENSSLDG00000023487	-	82	92.763	Seriola_lalandi_dorsalis
ENSCLAG00000005801	-	100	83.848	ENSSPUG00000017742	-	100	83.485	Sphenodon_punctatus
ENSCLAG00000005801	-	71	68.861	ENSTRUG00000011765	-	59	82.909	Takifugu_rubripes
ENSCLAG00000005801	-	51	80.142	ENSTNIG00000015299	-	68	82.671	Tetraodon_nigroviridis
ENSCLAG00000005801	-	93	91.602	ENSTBEG00000007504	-	100	91.602	Tupaia_belangeri
ENSCLAG00000005801	-	100	96.168	ENSTTRG00000006479	-	100	96.168	Tursiops_truncatus
ENSCLAG00000005801	-	99	87.706	ENSVPAG00000005541	-	99	87.706	Vicugna_pacos
ENSCLAG00000005801	-	94	75.290	ENSXETG00000005260	prpf38b	58	83.713	Xenopus_tropicalis
ENSCLAG00000005801	-	83	61.157	ENSXCOG00000008329	-	59	84.364	Xiphophorus_couchianus
ENSCLAG00000005801	-	82	61.587	ENSXMAG00000023831	-	59	84.364	Xiphophorus_maculatus