EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000005915 (Gene tree)
Gene ID: 102020580
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 10733 bases
Position: chrJH721883.1:2022417-2033149
Accession: 102020580
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008452	zf-C2H2	PF00096.26	4.2e-28	1	6
ENSCLAP00000008452	zf-C2H2	PF00096.26	4.2e-28	2	6
ENSCLAP00000008452	zf-C2H2	PF00096.26	4.2e-28	3	6
ENSCLAP00000008452	zf-C2H2	PF00096.26	4.2e-28	4	6
ENSCLAP00000008452	zf-C2H2	PF00096.26	4.2e-28	5	6
ENSCLAP00000008452	zf-C2H2	PF00096.26	4.2e-28	6	6
ENSCLAP00000008451	zf-C2H2	PF00096.26	4.8e-28	1	6
ENSCLAP00000008451	zf-C2H2	PF00096.26	4.8e-28	2	6
ENSCLAP00000008451	zf-C2H2	PF00096.26	4.8e-28	3	6
ENSCLAP00000008451	zf-C2H2	PF00096.26	4.8e-28	4	6
ENSCLAP00000008451	zf-C2H2	PF00096.26	4.8e-28	5	6
ENSCLAP00000008451	zf-C2H2	PF00096.26	4.8e-28	6	6
ENSCLAP00000008452	zf-met	PF12874.7	1.3e-07	1	1
ENSCLAP00000008451	zf-met	PF12874.7	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008578	GFI1-201	1335	-	ENSCLAP00000008451	444 (aa)	-	-
ENSCLAT00000008579	GFI1-202	3221	XM_013514361	ENSCLAP00000008452	433 (aa)	XP_013369815	-

Gene Model

Click here to download ENSCLAG00000005915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000005915	GFI1	51	41.135	ENSCLAG00000000250	ZNF550	69	41.606
ENSCLAG00000005915	GFI1	55	42.045	ENSCLAG00000001377	-	74	42.045
ENSCLAG00000005915	GFI1	51	43.182	ENSCLAG00000004223	ZFP1	67	43.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000005915	GFI1	100	85.023	ENSG00000162676	GFI1	100	86.493	Homo_sapiens
ENSCLAG00000005915	GFI1	100	60.633	ENSAPOG00000015189	gfi1ab	100	65.835	Acanthochromis_polyacanthus
ENSCLAG00000005915	GFI1	100	59.954	ENSACIG00000016354	gfi1ab	100	67.254	Amphilophus_citrinellus
ENSCLAG00000005915	GFI1	100	52.740	ENSAOCG00000008339	gfi1ab	100	57.576	Amphiprion_ocellaris
ENSCLAG00000005915	GFI1	100	61.086	ENSAPEG00000023870	gfi1ab	100	66.093	Amphiprion_percula
ENSCLAG00000005915	GFI1	100	59.589	ENSATEG00000009167	gfi1ab	90	64.232	Anabas_testudineus
ENSCLAG00000005915	GFI1	88	72.063	ENSAPLG00000015700	GFI1	99	78.286	Anas_platyrhynchos
ENSCLAG00000005915	GFI1	100	69.144	ENSACAG00000004498	GFI1	100	75.430	Anolis_carolinensis
ENSCLAG00000005915	GFI1	100	84.332	ENSANAG00000019656	GFI1	100	85.071	Aotus_nancymaae
ENSCLAG00000005915	GFI1	100	61.591	ENSACLG00000026458	gfi1ab	93	66.750	Astatotilapia_calliptera
ENSCLAG00000005915	GFI1	100	59.318	ENSAMXG00000039600	gfi1ab	100	64.573	Astyanax_mexicanus
ENSCLAG00000005915	GFI1	64	63.793	ENSAMXG00000006669	GFI1	88	63.514	Astyanax_mexicanus
ENSCLAG00000005915	GFI1	100	83.372	ENSBTAG00000016723	GFI1	100	85.511	Bos_taurus
ENSCLAG00000005915	GFI1	100	83.180	ENSCJAG00000017609	GFI1	100	84.597	Callithrix_jacchus
ENSCLAG00000005915	GFI1	100	83.871	ENSCAFG00000020155	GFI1	100	85.545	Canis_familiaris
ENSCLAG00000005915	GFI1	100	83.871	ENSCAFG00020013371	GFI1	92	83.673	Canis_lupus_dingo
ENSCLAG00000005915	GFI1	100	83.372	ENSCHIG00000016135	GFI1	100	85.273	Capra_hircus
ENSCLAG00000005915	GFI1	100	88.453	ENSCPOG00000011727	GFI1	100	88.571	Cavia_porcellus
ENSCLAG00000005915	GFI1	100	83.410	ENSCCAG00000036072	GFI1	100	85.071	Cebus_capucinus
ENSCLAG00000005915	GFI1	100	84.562	ENSCATG00000037873	GFI1	100	86.019	Cercocebus_atys
ENSCLAG00000005915	GFI1	87	81.915	ENSCSAG00000001469	GFI1	100	83.516	Chlorocebus_sabaeus
ENSCLAG00000005915	GFI1	100	84.332	ENSCANG00000034077	GFI1	100	85.782	Colobus_angolensis_palliatus
ENSCLAG00000005915	GFI1	100	81.567	ENSCGRG00001015432	Gfi1	100	82.227	Cricetulus_griseus_chok1gshd
ENSCLAG00000005915	GFI1	100	55.809	ENSCSEG00000017729	GFI1	100	60.837	Cynoglossus_semilaevis
ENSCLAG00000005915	GFI1	100	59.410	ENSCVAG00000011828	gfi1ab	100	64.677	Cyprinodon_variegatus
ENSCLAG00000005915	GFI1	82	80.631	ENSCVAG00000004930	GFI1	87	83.099	Cyprinodon_variegatus
ENSCLAG00000005915	GFI1	100	61.086	ENSDARG00000044457	gfi1ab	100	66.339	Danio_rerio
ENSCLAG00000005915	GFI1	100	84.101	ENSDNOG00000000782	GFI1	98	85.781	Dasypus_novemcinctus
ENSCLAG00000005915	GFI1	88	83.529	ENSEBUG00000008075	gfi1ab	57	83.529	Eptatretus_burgeri
ENSCLAG00000005915	GFI1	100	85.517	ENSEASG00005015509	GFI1	97	83.227	Equus_asinus_asinus
ENSCLAG00000005915	GFI1	92	77.556	ENSECAG00000006647	GFI1	92	79.740	Equus_caballus
ENSCLAG00000005915	GFI1	100	79.446	ENSEEUG00000000198	GFI1	100	81.775	Erinaceus_europaeus
ENSCLAG00000005915	GFI1	100	55.656	ENSELUG00000019033	GFI1	83	85.340	Esox_lucius
ENSCLAG00000005915	GFI1	100	62.217	ENSELUG00000003015	gfi1ab	95	85.185	Esox_lucius
ENSCLAG00000005915	GFI1	100	84.332	ENSFCAG00000005914	GFI1	100	85.545	Felis_catus
ENSCLAG00000005915	GFI1	100	59.865	ENSFHEG00000010997	gfi1ab	100	65.764	Fundulus_heteroclitus
ENSCLAG00000005915	GFI1	100	55.679	ENSFHEG00000000341	GFI1	90	80.365	Fundulus_heteroclitus
ENSCLAG00000005915	GFI1	100	59.681	ENSGMOG00000007737	gfi1ab	100	65.337	Gadus_morhua
ENSCLAG00000005915	GFI1	100	70.814	ENSGALG00000043650	GFI1	100	76.543	Gallus_gallus
ENSCLAG00000005915	GFI1	100	59.864	ENSGAFG00000016637	gfi1ab	100	64.865	Gambusia_affinis
ENSCLAG00000005915	GFI1	100	56.858	ENSGAFG00000018063	GFI1	89	80.365	Gambusia_affinis
ENSCLAG00000005915	GFI1	100	61.327	ENSGACG00000004257	gfi1ab	97	66.667	Gasterosteus_aculeatus
ENSCLAG00000005915	GFI1	100	85.023	ENSGGOG00000005320	GFI1	100	86.493	Gorilla_gorilla
ENSCLAG00000005915	GFI1	100	55.281	ENSHBUG00000011969	gfi1ab	100	66.667	Haplochromis_burtoni
ENSCLAG00000005915	GFI1	100	88.222	ENSHGLG00000008020	GFI1	100	88.571	Heterocephalus_glaber_female
ENSCLAG00000005915	GFI1	100	88.222	ENSHGLG00100000610	GFI1	100	88.571	Heterocephalus_glaber_male
ENSCLAG00000005915	GFI1	74	88.710	ENSHCOG00000019555	GFI1	84	88.710	Hippocampus_comes
ENSCLAG00000005915	GFI1	100	52.466	ENSHCOG00000008590	gfi1ab	99	71.605	Hippocampus_comes
ENSCLAG00000005915	GFI1	52	50.800	ENSIPUG00000021407	-	75	50.800	Ictalurus_punctatus
ENSCLAG00000005915	GFI1	100	59.633	ENSIPUG00000010071	gfi1ab	87	65.000	Ictalurus_punctatus
ENSCLAG00000005915	GFI1	83	83.333	ENSIPUG00000013414	GFI1	93	83.333	Ictalurus_punctatus
ENSCLAG00000005915	GFI1	100	82.258	ENSSTOG00000014583	GFI1	100	84.360	Ictidomys_tridecemlineatus
ENSCLAG00000005915	GFI1	100	60.771	ENSKMAG00000003810	gfi1ab	100	66.500	Kryptolebias_marmoratus
ENSCLAG00000005915	GFI1	100	60.860	ENSLBEG00000027776	gfi1ab	100	66.500	Labrus_bergylta
ENSCLAG00000005915	GFI1	77	77.222	ENSLACG00000017590	-	99	77.222	Latimeria_chalumnae
ENSCLAG00000005915	GFI1	100	66.970	ENSLACG00000013362	GFI1	98	72.208	Latimeria_chalumnae
ENSCLAG00000005915	GFI1	100	65.158	ENSLOCG00000004711	gfi1ab	100	70.762	Lepisosteus_oculatus
ENSCLAG00000005915	GFI1	100	79.493	ENSLAFG00000018346	GFI1	100	81.643	Loxodonta_africana
ENSCLAG00000005915	GFI1	100	84.562	ENSMFAG00000045801	GFI1	100	86.019	Macaca_fascicularis
ENSCLAG00000005915	GFI1	100	84.562	ENSMNEG00000036338	GFI1	100	86.019	Macaca_nemestrina
ENSCLAG00000005915	GFI1	100	84.562	ENSMLEG00000036181	GFI1	100	86.019	Mandrillus_leucophaeus
ENSCLAG00000005915	GFI1	100	62.045	ENSMAMG00000008125	gfi1ab	100	68.090	Mastacembelus_armatus
ENSCLAG00000005915	GFI1	100	61.818	ENSMZEG00005009895	gfi1ab	100	67.000	Maylandia_zebra
ENSCLAG00000005915	GFI1	88	72.396	ENSMGAG00000008187	GFI1	100	78.963	Meleagris_gallopavo
ENSCLAG00000005915	GFI1	100	83.871	ENSMICG00000047208	GFI1	100	85.308	Microcebus_murinus
ENSCLAG00000005915	GFI1	82	83.562	ENSMMOG00000005556	gfi1ab	95	84.186	Mola_mola
ENSCLAG00000005915	GFI1	100	74.107	ENSMODG00000011802	GFI1	100	75.463	Monodelphis_domestica
ENSCLAG00000005915	GFI1	100	61.276	ENSMALG00000014672	gfi1ab	100	66.329	Monopterus_albus
ENSCLAG00000005915	GFI1	100	83.218	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSCLAG00000005915	GFI1	100	82.989	ENSMUSG00000029275	Gfi1	100	84.397	Mus_musculus
ENSCLAG00000005915	GFI1	100	82.299	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSCLAG00000005915	GFI1	100	82.759	MGP_SPRETEiJ_G0028507	Gfi1	100	84.161	Mus_spretus
ENSCLAG00000005915	GFI1	100	78.111	ENSMPUG00000004178	GFI1	96	96.789	Mustela_putorius_furo
ENSCLAG00000005915	GFI1	100	80.046	ENSMLUG00000015191	GFI1	98	82.547	Myotis_lucifugus
ENSCLAG00000005915	GFI1	100	60.314	ENSNBRG00000015774	gfi1ab	100	65.926	Neolamprologus_brichardi
ENSCLAG00000005915	GFI1	93	82.878	ENSNLEG00000010470	GFI1	97	84.399	Nomascus_leucogenys
ENSCLAG00000005915	GFI1	100	86.175	ENSOPRG00000001473	GFI1	100	86.256	Ochotona_princeps
ENSCLAG00000005915	GFI1	100	61.591	ENSONIG00000019246	gfi1ab	100	66.750	Oreochromis_niloticus
ENSCLAG00000005915	GFI1	87	81.963	ENSOCUG00000023553	GFI1	93	82.228	Oryctolagus_cuniculus
ENSCLAG00000005915	GFI1	100	58.257	ENSORLG00000013806	gfi1ab	86	89.175	Oryzias_latipes
ENSCLAG00000005915	GFI1	100	57.079	ENSORLG00000005060	GFI1	100	61.071	Oryzias_latipes
ENSCLAG00000005915	GFI1	100	52.174	ENSORLG00020002817	GFI1	90	65.686	Oryzias_latipes_hni
ENSCLAG00000005915	GFI1	100	59.633	ENSORLG00020001602	gfi1ab	85	91.892	Oryzias_latipes_hni
ENSCLAG00000005915	GFI1	100	56.818	ENSORLG00015006070	GFI1	82	88.710	Oryzias_latipes_hsok
ENSCLAG00000005915	GFI1	100	55.782	ENSOMEG00000016722	GFI1	91	80.000	Oryzias_melastigma
ENSCLAG00000005915	GFI1	88	83.418	ENSOGAG00000027913	GFI1	98	99.448	Otolemur_garnettii
ENSCLAG00000005915	GFI1	67	97.143	ENSOARG00000016329	GFI1	94	97.143	Ovis_aries
ENSCLAG00000005915	GFI1	92	90.000	ENSPPAG00000042186	GFI1	97	100.000	Pan_paniscus
ENSCLAG00000005915	GFI1	100	84.332	ENSPPRG00000007521	GFI1	100	85.545	Panthera_pardus
ENSCLAG00000005915	GFI1	100	85.023	ENSPTRG00000043053	GFI1	100	86.493	Pan_troglodytes
ENSCLAG00000005915	GFI1	100	84.562	ENSPANG00000016433	GFI1	100	86.019	Papio_anubis
ENSCLAG00000005915	GFI1	100	62.697	ENSPKIG00000004263	GFI1	100	67.813	Paramormyrops_kingsleyae
ENSCLAG00000005915	GFI1	88	71.948	ENSPSIG00000008734	GFI1	97	79.023	Pelodiscus_sinensis
ENSCLAG00000005915	GFI1	100	57.604	ENSPMGG00000012546	gfi1ab	100	63.198	Periophthalmus_magnuspinnatus
ENSCLAG00000005915	GFI1	87	54.220	ENSPMGG00000011041	GFI1	99	53.964	Periophthalmus_magnuspinnatus
ENSCLAG00000005915	GFI1	100	75.964	ENSPCIG00000013728	GFI1	100	77.830	Phascolarctos_cinereus
ENSCLAG00000005915	GFI1	100	60.641	ENSPFOG00000023214	gfi1ab	100	64.619	Poecilia_formosa
ENSCLAG00000005915	GFI1	100	60.641	ENSPLAG00000010879	gfi1ab	100	64.619	Poecilia_latipinna
ENSCLAG00000005915	GFI1	100	59.453	ENSPLAG00000005376	GFI1	91	63.789	Poecilia_latipinna
ENSCLAG00000005915	GFI1	100	59.091	ENSPMEG00000019299	GFI1	90	79.817	Poecilia_mexicana
ENSCLAG00000005915	GFI1	100	61.098	ENSPMEG00000013694	gfi1ab	92	87.379	Poecilia_mexicana
ENSCLAG00000005915	GFI1	69	95.625	ENSPREG00000007997	GFI1	83	95.625	Poecilia_reticulata
ENSCLAG00000005915	GFI1	100	61.098	ENSPREG00000014097	gfi1ab	100	65.111	Poecilia_reticulata
ENSCLAG00000005915	GFI1	100	73.272	ENSPCAG00000011020	GFI1	100	73.733	Procavia_capensis
ENSCLAG00000005915	GFI1	100	83.180	ENSPCOG00000020540	GFI1	100	84.597	Propithecus_coquereli
ENSCLAG00000005915	GFI1	100	81.106	ENSPVAG00000006928	GFI1	100	84.412	Pteropus_vampyrus
ENSCLAG00000005915	GFI1	100	61.591	ENSPNYG00000021183	gfi1ab	100	66.750	Pundamilia_nyererei
ENSCLAG00000005915	GFI1	100	51.732	ENSPNAG00000028014	GFI1	94	79.091	Pygocentrus_nattereri
ENSCLAG00000005915	GFI1	100	59.862	ENSPNAG00000027258	gfi1ab	100	64.975	Pygocentrus_nattereri
ENSCLAG00000005915	GFI1	88	53.636	ENSPNAG00000014299	-	58	62.147	Pygocentrus_nattereri
ENSCLAG00000005915	GFI1	100	82.529	ENSRNOG00000002042	Gfi1	100	84.161	Rattus_norvegicus
ENSCLAG00000005915	GFI1	100	84.793	ENSRBIG00000036467	GFI1	100	86.256	Rhinopithecus_bieti
ENSCLAG00000005915	GFI1	100	84.793	ENSRROG00000031687	GFI1	100	86.256	Rhinopithecus_roxellana
ENSCLAG00000005915	GFI1	100	83.410	ENSSBOG00000031300	GFI1	100	85.071	Saimiri_boliviensis_boliviensis
ENSCLAG00000005915	GFI1	88	57.018	ENSSFOG00015008114	-	89	57.018	Scleropages_formosus
ENSCLAG00000005915	GFI1	100	65.533	ENSSFOG00015020295	gfi1	100	70.720	Scleropages_formosus
ENSCLAG00000005915	GFI1	100	61.136	ENSSMAG00000002782	gfi1ab	100	66.584	Scophthalmus_maximus
ENSCLAG00000005915	GFI1	100	59.540	ENSSDUG00000022410	gfi1ab	100	65.903	Seriola_dumerili
ENSCLAG00000005915	GFI1	100	59.310	ENSSLDG00000020163	gfi1ab	100	65.316	Seriola_lalandi_dorsalis
ENSCLAG00000005915	GFI1	82	80.645	ENSSPAG00000009140	gfi1ab	99	80.645	Stegastes_partitus
ENSCLAG00000005915	GFI1	100	85.681	ENSSSCG00000006902	GFI1	100	86.331	Sus_scrofa
ENSCLAG00000005915	GFI1	88	72.324	ENSTGUG00000006060	GFI1	100	78.571	Taeniopygia_guttata
ENSCLAG00000005915	GFI1	100	57.955	ENSTRUG00000000415	gfi1ab	91	85.437	Takifugu_rubripes
ENSCLAG00000005915	GFI1	76	85.437	ENSTNIG00000000651	gfi1ab	83	85.507	Tetraodon_nigroviridis
ENSCLAG00000005915	GFI1	100	84.065	ENSTTRG00000000082	GFI1	100	84.086	Tursiops_truncatus
ENSCLAG00000005915	GFI1	100	82.989	ENSUAMG00000021124	GFI1	97	84.562	Ursus_americanus
ENSCLAG00000005915	GFI1	100	65.517	ENSXETG00000023006	gfi1	98	70.750	Xenopus_tropicalis
ENSCLAG00000005915	GFI1	55	80.734	ENSXCOG00000013213	-	80	80.734	Xiphophorus_couchianus
ENSCLAG00000005915	GFI1	100	49.096	ENSXMAG00000009274	GFI1	62	75.460	Xiphophorus_maculatus
ENSCLAG00000005915	GFI1	100	60.412	ENSXMAG00000010523	gfi1ab	100	64.373	Xiphophorus_maculatus