EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCLAG00000005989 (Gene tree)
Gene ID
102018527
Gene Symbol
YTHDF1
Alias
C20orf21|FLJ20391
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Chinchilla_lanigera
Status
putative
Strand
Plus strand
Length
16541 bases
Position
chrJH721988.1:935182-951722
Accession
102018527
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCLAP00000008566YTHPF04146.159.6e-4211
ENSCLAP00000008567YTHPF04146.159.8e-4211
ENSCLAP00000008568YTHPF04146.151.1e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCLAT00000008695YTHDF1-2031764-ENSCLAP00000008568587 (aa)--
ENSCLAT00000008694YTHDF1-2021665XM_005409995ENSCLAP00000008567554 (aa)XP_005410052UPI00038ECA66
ENSCLAT00000008693YTHDF1-2013192XM_005409994ENSCLAP00000008566560 (aa)XP_005410051UPI00038ED0A1
Gene Model
Click here to download ENSCLAG00000005989's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000005989's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCLAG00000005989YTHDF19765.664ENSCLAG00000007438YTHDF29665.419
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCLAG00000005989YTHDF110094.286ENSG00000149658YTHDF110094.286Homo_sapiens
ENSCLAG00000005989YTHDF110074.914ENSAPOG00000010796YTHDF110074.010Acanthochromis_polyacanthus
ENSCLAG00000005989YTHDF19673.440ENSAPOG00000004358ythdf19773.721Acanthochromis_polyacanthus
ENSCLAG00000005989YTHDF19991.304ENSAMEG00000017323YTHDF19893.297Ailuropoda_melanoleuca
ENSCLAG00000005989YTHDF19669.735ENSACIG00000011264ythdf19869.828Amphilophus_citrinellus
ENSCLAG00000005989YTHDF110074.697ENSACIG00000020083YTHDF110073.333Amphilophus_citrinellus
ENSCLAG00000005989YTHDF110073.958ENSAOCG00000012567YTHDF110073.322Amphiprion_ocellaris
ENSCLAG00000005989YTHDF19971.240ENSAOCG00000022251ythdf19872.776Amphiprion_ocellaris
ENSCLAG00000005989YTHDF110074.132ENSAPEG00000008750YTHDF110073.494Amphiprion_percula
ENSCLAG00000005989YTHDF19671.017ENSAPEG00000021878ythdf19570.924Amphiprion_percula
ENSCLAG00000005989YTHDF110073.611ENSATEG00000005996YTHDF110073.162Anabas_testudineus
ENSCLAG00000005989YTHDF19673.429ENSATEG00000023840ythdf19870.326Anabas_testudineus
ENSCLAG00000005989YTHDF19989.767ENSAPLG00000005985YTHDF19989.767Anas_platyrhynchos
ENSCLAG00000005989YTHDF110085.383ENSACAG00000005560YTHDF110085.561Anolis_carolinensis
ENSCLAG00000005989YTHDF110079.643ENSANAG00000021022-10076.786Aotus_nancymaae
ENSCLAG00000005989YTHDF110093.750ENSANAG00000034786-10093.750Aotus_nancymaae
ENSCLAG00000005989YTHDF110074.132ENSACLG00000025518YTHDF110073.494Astatotilapia_calliptera
ENSCLAG00000005989YTHDF110088.571ENSBTAG00000010383YTHDF110088.929Bos_taurus
ENSCLAG00000005989YTHDF110093.929ENSCJAG00000010056YTHDF110093.929Callithrix_jacchus
ENSCLAG00000005989YTHDF19292.534ENSCAFG00000012772YTHDF19992.731Canis_familiaris
ENSCLAG00000005989YTHDF19292.534ENSCAFG00020001214YTHDF19992.731Canis_lupus_dingo
ENSCLAG00000005989YTHDF110088.214ENSCHIG00000026494YTHDF110088.571Capra_hircus
ENSCLAG00000005989YTHDF19993.807ENSTSYG00000033436YTHDF19993.807Carlito_syrichta
ENSCLAG00000005989YTHDF19894.659ENSCAPG00000002544YTHDF19494.495Cavia_aperea
ENSCLAG00000005989YTHDF110096.607ENSCPOG00000010202YTHDF110096.786Cavia_porcellus
ENSCLAG00000005989YTHDF110092.857ENSCCAG00000024650YTHDF110093.571Cebus_capucinus
ENSCLAG00000005989YTHDF110093.750ENSCATG00000033272YTHDF110094.286Cercocebus_atys
ENSCLAG00000005989YTHDF110093.929ENSCSAG00000016266YTHDF110094.464Chlorocebus_sabaeus
ENSCLAG00000005989YTHDF110090.018ENSCPBG00000027183YTHDF110086.988Chrysemys_picta_bellii
ENSCLAG00000005989YTHDF19993.841ENSCANG00000029082YTHDF19894.384Colobus_angolensis_palliatus
ENSCLAG00000005989YTHDF110094.286ENSCGRG00001016568Ythdf110094.286Cricetulus_griseus_chok1gshd
ENSCLAG00000005989YTHDF19894.192ENSCGRG00000009207Ythdf110094.192Cricetulus_griseus_crigri
ENSCLAG00000005989YTHDF19573.734ENSCSEG00000020623YTHDF19773.945Cynoglossus_semilaevis
ENSCLAG00000005989YTHDF19873.132ENSCVAG00000014378YTHDF19974.643Cyprinodon_variegatus
ENSCLAG00000005989YTHDF19971.201ENSCVAG00000017940ythdf19771.532Cyprinodon_variegatus
ENSCLAG00000005989YTHDF110070.033ENSDARG00000016447ythdf19573.242Danio_rerio
ENSCLAG00000005989YTHDF110090.893ENSDNOG00000043590YTHDF110090.893Dasypus_novemcinctus
ENSCLAG00000005989YTHDF19888.950ENSDORG00000002879Ythdf110084.775Dipodomys_ordii
ENSCLAG00000005989YTHDF17666.917ENSETEG00000017860-9867.376Echinops_telfairi
ENSCLAG00000005989YTHDF110091.964ENSEASG00005023186YTHDF110093.036Equus_asinus_asinus
ENSCLAG00000005989YTHDF19892.015ENSECAG00000019475YTHDF19992.731Equus_caballus
ENSCLAG00000005989YTHDF19390.698ENSEEUG00000007461YTHDF19990.097Erinaceus_europaeus
ENSCLAG00000005989YTHDF19572.661ENSELUG00000001906YTHDF19970.683Esox_lucius
ENSCLAG00000005989YTHDF19971.307ENSELUG00000022768ythdf19973.684Esox_lucius
ENSCLAG00000005989YTHDF110090.536ENSFCAG00000008917YTHDF110092.679Felis_catus
ENSCLAG00000005989YTHDF110090.196ENSFALG00000010463YTHDF110090.196Ficedula_albicollis
ENSCLAG00000005989YTHDF110096.786ENSFDAG00000019602YTHDF110096.786Fukomys_damarensis
ENSCLAG00000005989YTHDF19971.605ENSFHEG00000023218ythdf19971.076Fundulus_heteroclitus
ENSCLAG00000005989YTHDF19874.555ENSFHEG00000002540YTHDF19973.451Fundulus_heteroclitus
ENSCLAG00000005989YTHDF18589.637ENSGMOG00000019610ythdf19569.640Gadus_morhua
ENSCLAG00000005989YTHDF110090.196ENSGALG00000005745YTHDF110090.215Gallus_gallus
ENSCLAG00000005989YTHDF110072.085ENSGAFG00000021100YTHDF19974.286Gambusia_affinis
ENSCLAG00000005989YTHDF110073.480ENSGACG00000002613YTHDF110071.959Gasterosteus_aculeatus
ENSCLAG00000005989YTHDF19672.281ENSGACG00000012014ythdf19571.231Gasterosteus_aculeatus
ENSCLAG00000005989YTHDF110089.840ENSGAGG00000003007YTHDF110086.988Gopherus_agassizii
ENSCLAG00000005989YTHDF110094.643ENSGGOG00000008340YTHDF110094.643Gorilla_gorilla
ENSCLAG00000005989YTHDF19671.479ENSHBUG00000011284ythdf19971.034Haplochromis_burtoni
ENSCLAG00000005989YTHDF110073.958ENSHBUG00000004875YTHDF110073.322Haplochromis_burtoni
ENSCLAG00000005989YTHDF110098.036ENSHGLG00000006585YTHDF110098.036Heterocephalus_glaber_female
ENSCLAG00000005989YTHDF110098.036ENSHGLG00100004683YTHDF110098.036Heterocephalus_glaber_male
ENSCLAG00000005989YTHDF19970.618ENSHCOG00000008866ythdf19869.882Hippocampus_comes
ENSCLAG00000005989YTHDF110070.275ENSHCOG00000011303YTHDF110073.346Hippocampus_comes
ENSCLAG00000005989YTHDF110075.267ENSIPUG00000000425Ythdf19875.714Ictalurus_punctatus
ENSCLAG00000005989YTHDF19994.746ENSSTOG00000023001YTHDF19995.290Ictidomys_tridecemlineatus
ENSCLAG00000005989YTHDF19894.192ENSJJAG00000013589Ythdf110094.737Jaculus_jaculus
ENSCLAG00000005989YTHDF19572.727ENSKMAG00000005595ythdf19772.093Kryptolebias_marmoratus
ENSCLAG00000005989YTHDF19873.843ENSKMAG00000017472YTHDF19973.712Kryptolebias_marmoratus
ENSCLAG00000005989YTHDF19573.752ENSLBEG00000014105ythdf19570.648Labrus_bergylta
ENSCLAG00000005989YTHDF110073.220ENSLBEG00000012068YTHDF110074.527Labrus_bergylta
ENSCLAG00000005989YTHDF19781.801ENSLACG00000014195YTHDF19882.689Latimeria_chalumnae
ENSCLAG00000005989YTHDF110077.281ENSLOCG00000005020ythdf19579.091Lepisosteus_oculatus
ENSCLAG00000005989YTHDF110091.964ENSLAFG00000008884YTHDF110091.964Loxodonta_africana
ENSCLAG00000005989YTHDF110093.929ENSMFAG00000042868YTHDF110094.464Macaca_fascicularis
ENSCLAG00000005989YTHDF110093.929ENSMMUG00000009227YTHDF110094.464Macaca_mulatta
ENSCLAG00000005989YTHDF110093.929ENSMNEG00000030851YTHDF110094.464Macaca_nemestrina
ENSCLAG00000005989YTHDF19894.011ENSMLEG00000009252YTHDF110094.555Mandrillus_leucophaeus
ENSCLAG00000005989YTHDF110074.221ENSMAMG00000011072YTHDF110073.024Mastacembelus_armatus
ENSCLAG00000005989YTHDF19671.583ENSMAMG00000024255ythdf19972.444Mastacembelus_armatus
ENSCLAG00000005989YTHDF110073.958ENSMZEG00005023596YTHDF110073.322Maylandia_zebra
ENSCLAG00000005989YTHDF19573.665ENSMZEG00005026397ythdf19872.954Maylandia_zebra
ENSCLAG00000005989YTHDF19989.267ENSMGAG00000006139YTHDF19989.267Meleagris_gallopavo
ENSCLAG00000005989YTHDF110094.286ENSMAUG00000017660Ythdf110094.286Mesocricetus_auratus
ENSCLAG00000005989YTHDF110093.929ENSMICG00000032266YTHDF110094.464Microcebus_murinus
ENSCLAG00000005989YTHDF110094.286ENSMOCG00000013573Ythdf110094.286Microtus_ochrogaster
ENSCLAG00000005989YTHDF19970.675ENSMMOG00000020467YTHDF19471.039Mola_mola
ENSCLAG00000005989YTHDF19290.215ENSMODG00000016842YTHDF110090.215Monodelphis_domestica
ENSCLAG00000005989YTHDF110073.966ENSMALG00000022209YTHDF110073.838Monopterus_albus
ENSCLAG00000005989YTHDF19671.685ENSMALG00000015672ythdf19673.036Monopterus_albus
ENSCLAG00000005989YTHDF110094.286MGP_CAROLIEiJ_G0024790Ythdf110094.286Mus_caroli
ENSCLAG00000005989YTHDF110094.286ENSMUSG00000038848Ythdf110094.286Mus_musculus
ENSCLAG00000005989YTHDF110093.929MGP_PahariEiJ_G0026237Ythdf110093.929Mus_pahari
ENSCLAG00000005989YTHDF110094.286MGP_SPRETEiJ_G0025715Ythdf110094.286Mus_spretus
ENSCLAG00000005989YTHDF19287.059ENSMPUG00000008111YTHDF110088.235Mustela_putorius_furo
ENSCLAG00000005989YTHDF19891.160ENSMLUG00000002241YTHDF19691.160Myotis_lucifugus
ENSCLAG00000005989YTHDF110093.571ENSNGAG00000000334Ythdf110095.179Nannospalax_galili
ENSCLAG00000005989YTHDF19969.588ENSNBRG00000008213ythdf19771.555Neolamprologus_brichardi
ENSCLAG00000005989YTHDF110073.958ENSNBRG00000015321YTHDF110073.322Neolamprologus_brichardi
ENSCLAG00000005989YTHDF19679.887ENSOPRG00000001758-9980.639Ochotona_princeps
ENSCLAG00000005989YTHDF110097.679ENSODEG00000004380-10097.679Octodon_degus
ENSCLAG00000005989YTHDF110081.028ENSODEG00000000074-10081.028Octodon_degus
ENSCLAG00000005989YTHDF19571.429ENSONIG00000016799ythdf19769.983Oreochromis_niloticus
ENSCLAG00000005989YTHDF110090.196ENSOANG00000003723YTHDF110090.196Ornithorhynchus_anatinus
ENSCLAG00000005989YTHDF110082.416ENSOCUG00000012780YTHDF110082.060Oryctolagus_cuniculus
ENSCLAG00000005989YTHDF19873.393ENSORLG00000009739YTHDF19973.750Oryzias_latipes
ENSCLAG00000005989YTHDF19571.223ENSORLG00000014665YTHDF19570.598Oryzias_latipes
ENSCLAG00000005989YTHDF19670.588ENSORLG00020000307ythdf19571.062Oryzias_latipes_hni
ENSCLAG00000005989YTHDF19874.322ENSORLG00020001332YTHDF19974.684Oryzias_latipes_hni
ENSCLAG00000005989YTHDF19670.415ENSORLG00015006302ythdf19570.890Oryzias_latipes_hsok
ENSCLAG00000005989YTHDF19873.036ENSORLG00015018321YTHDF19973.050Oryzias_latipes_hsok
ENSCLAG00000005989YTHDF110069.756ENSOMEG00000011843YTHDF19571.259Oryzias_melastigma
ENSCLAG00000005989YTHDF19672.973ENSOMEG00000002941YTHDF19872.727Oryzias_melastigma
ENSCLAG00000005989YTHDF110093.393ENSOGAG00000000480YTHDF110093.393Otolemur_garnettii
ENSCLAG00000005989YTHDF19983.696ENSOARG00000011639YTHDF19884.058Ovis_aries
ENSCLAG00000005989YTHDF19994.746ENSPPAG00000023277YTHDF110094.746Pan_paniscus
ENSCLAG00000005989YTHDF110090.714ENSPPRG00000020805YTHDF110092.857Panthera_pardus
ENSCLAG00000005989YTHDF19981.522ENSPTIG00000017355YTHDF19981.835Panthera_tigris_altaica
ENSCLAG00000005989YTHDF110094.643ENSPTRG00000013730YTHDF110094.643Pan_troglodytes
ENSCLAG00000005989YTHDF110093.929ENSPANG00000021472YTHDF110094.464Papio_anubis
ENSCLAG00000005989YTHDF110068.586ENSPKIG00000005427ythdf110070.035Paramormyrops_kingsleyae
ENSCLAG00000005989YTHDF19971.681ENSPKIG00000005026YTHDF19771.223Paramormyrops_kingsleyae
ENSCLAG00000005989YTHDF19789.758ENSPSIG00000005529YTHDF19689.572Pelodiscus_sinensis
ENSCLAG00000005989YTHDF19570.578ENSPMGG00000015328ythdf19771.178Periophthalmus_magnuspinnatus
ENSCLAG00000005989YTHDF19873.070ENSPMGG00000009101YTHDF19973.196Periophthalmus_magnuspinnatus
ENSCLAG00000005989YTHDF19894.192ENSPEMG00000020199Ythdf110094.192Peromyscus_maniculatus_bairdii
ENSCLAG00000005989YTHDF19990.253ENSPCIG00000017170YTHDF110090.215Phascolarctos_cinereus
ENSCLAG00000005989YTHDF19970.320ENSPFOG00000005405ythdf19570.294Poecilia_formosa
ENSCLAG00000005989YTHDF19972.935ENSPLAG00000006653ythdf19872.093Poecilia_latipinna
ENSCLAG00000005989YTHDF110069.872ENSPLAG00000006298YTHDF19571.186Poecilia_latipinna
ENSCLAG00000005989YTHDF110072.396ENSPMEG00000020969-10072.743Poecilia_mexicana
ENSCLAG00000005989YTHDF19972.183ENSPMEG00000023753ythdf19871.735Poecilia_mexicana
ENSCLAG00000005989YTHDF19870.199ENSPREG00000017662YTHDF19571.256Poecilia_reticulata
ENSCLAG00000005989YTHDF19971.781ENSPREG00000002173ythdf19872.043Poecilia_reticulata
ENSCLAG00000005989YTHDF18597.015ENSPPYG00000011226YTHDF110097.015Pongo_abelii
ENSCLAG00000005989YTHDF19085.887ENSPCAG00000002452YTHDF110086.024Procavia_capensis
ENSCLAG00000005989YTHDF110094.464ENSPCOG00000025969YTHDF110095.000Propithecus_coquereli
ENSCLAG00000005989YTHDF19883.485ENSPVAG00000017568YTHDF19883.640Pteropus_vampyrus
ENSCLAG00000005989YTHDF110073.958ENSPNYG00000002266YTHDF110073.322Pundamilia_nyererei
ENSCLAG00000005989YTHDF19573.665ENSPNYG00000014007ythdf19872.954Pundamilia_nyererei
ENSCLAG00000005989YTHDF110070.588ENSPNAG00000012447ythdf110074.603Pygocentrus_nattereri
ENSCLAG00000005989YTHDF110093.929ENSRNOG00000027015Ythdf110093.929Rattus_norvegicus
ENSCLAG00000005989YTHDF110092.857ENSRBIG00000044959YTHDF110093.393Rhinopithecus_bieti
ENSCLAG00000005989YTHDF110092.679ENSRROG00000033014YTHDF110093.214Rhinopithecus_roxellana
ENSCLAG00000005989YTHDF19891.713ENSSBOG00000027278YTHDF19991.159Saimiri_boliviensis_boliviensis
ENSCLAG00000005989YTHDF19989.606ENSSHAG00000010430YTHDF18989.606Sarcophilus_harrisii
ENSCLAG00000005989YTHDF110073.649ENSSFOG00015000284ythdf110073.898Scleropages_formosus
ENSCLAG00000005989YTHDF19578.947ENSSMAG00000007635YTHDF19473.322Scophthalmus_maximus
ENSCLAG00000005989YTHDF17383.444ENSSMAG00000013715ythdf19664.933Scophthalmus_maximus
ENSCLAG00000005989YTHDF19974.472ENSSDUG00000015823YTHDF19973.944Seriola_dumerili
ENSCLAG00000005989YTHDF19574.354ENSSDUG00000000435ythdf19674.552Seriola_dumerili
ENSCLAG00000005989YTHDF110070.723ENSSLDG00000001054YTHDF110071.605Seriola_lalandi_dorsalis
ENSCLAG00000005989YTHDF19670.427ENSSLDG00000024948ythdf19671.017Seriola_lalandi_dorsalis
ENSCLAG00000005989YTHDF19288.845ENSSPUG00000015143YTHDF110086.888Sphenodon_punctatus
ENSCLAG00000005989YTHDF19670.051ENSSPAG00000014989ythdf19670.785Stegastes_partitus
ENSCLAG00000005989YTHDF110072.978ENSSPAG00000003666YTHDF110072.355Stegastes_partitus
ENSCLAG00000005989YTHDF110087.166ENSSSCG00000040086YTHDF110086.809Sus_scrofa
ENSCLAG00000005989YTHDF19990.054ENSTGUG00000007565YTHDF110090.054Taeniopygia_guttata
ENSCLAG00000005989YTHDF19670.826ENSTRUG00000005049YTHDF19870.995Takifugu_rubripes
ENSCLAG00000005989YTHDF19971.549ENSTRUG00000004288ythdf19870.890Takifugu_rubripes
ENSCLAG00000005989YTHDF110072.222ENSTNIG00000003975YTHDF110072.396Tetraodon_nigroviridis
ENSCLAG00000005989YTHDF19972.232ENSTNIG00000012490ythdf19973.077Tetraodon_nigroviridis
ENSCLAG00000005989YTHDF19985.714ENSTTRG00000001804YTHDF19887.684Tursiops_truncatus
ENSCLAG00000005989YTHDF19891.160ENSUAMG00000011021YTHDF19992.534Ursus_americanus
ENSCLAG00000005989YTHDF19290.000ENSUMAG00000022290YTHDF19992.141Ursus_maritimus
ENSCLAG00000005989YTHDF19292.534ENSVVUG00000015275YTHDF19992.927Vulpes_vulpes
ENSCLAG00000005989YTHDF19784.530ENSXETG00000027086ythdf19682.633Xenopus_tropicalis
ENSCLAG00000005989YTHDF19772.414ENSXCOG00000002490ythdf19472.072Xiphophorus_couchianus
ENSCLAG00000005989YTHDF19870.181ENSXCOG00000008115YTHDF19671.355Xiphophorus_couchianus
ENSCLAG00000005989YTHDF19772.495ENSXMAG00000008525ythdf19871.002Xiphophorus_maculatus
ENSCLAG00000005989YTHDF19874.510ENSXMAG00000015644YTHDF19974.377Xiphophorus_maculatus

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