EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000006053 (Gene tree)
Gene ID: 102004840
Gene Symbol: -
Alias: -
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 47555 bases
Position: chrJH721890.1:11992449-12040003
Accession: 102004840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008655	MMR_HSR1	PF01926.23	7.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008783	-	2127	XM_005387462	ENSCLAP00000008655	215 (aa)	XP_005387519	UPI00038ED137

Gene Model

Click here to download ENSCLAG00000006053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000006053	-	73	31.875	ENSCLAG00000009672	RAB34	61	31.875
ENSCLAG00000006053	-	80	31.111	ENSCLAG00000016519	KRAS	94	31.111
ENSCLAG00000006053	-	90	41.206	ENSCLAG00000015766	RAB24	96	42.211
ENSCLAG00000006053	-	82	31.667	ENSCLAG00000002823	HRAS	94	31.667
ENSCLAG00000006053	-	95	40.976	ENSCLAG00000008913	RAB37	93	40.976
ENSCLAG00000006053	-	75	36.585	ENSCLAG00000000113	RAB39B	77	36.585
ENSCLAG00000006053	-	81	43.678	ENSCLAG00000014030	RAB30	86	43.678
ENSCLAG00000006053	-	90	37.436	ENSCLAG00000013339	RAB35	96	37.436
ENSCLAG00000006053	-	78	34.302	ENSCLAG00000016162	RERG	84	34.302
ENSCLAG00000006053	-	84	40.984	ENSCLAG00000002400	RAB2B	95	40.984
ENSCLAG00000006053	-	82	42.135	ENSCLAG00000006603	-	88	42.135
ENSCLAG00000006053	-	74	40.881	ENSCLAG00000004324	RAB15	75	40.881
ENSCLAG00000006053	-	91	41.951	ENSCLAG00000007435	RAB11A	94	41.951
ENSCLAG00000006053	-	90	45.408	ENSCLAG00000015776	RAB1B	96	45.408
ENSCLAG00000006053	-	90	40.909	ENSCLAG00000003784	RAB25	93	40.909
ENSCLAG00000006053	-	81	33.908	ENSCLAG00000006333	RAB7A	82	33.908
ENSCLAG00000006053	-	75	41.615	ENSCLAG00000005708	RAB2A	76	41.615
ENSCLAG00000006053	-	75	41.566	ENSCLAG00000005031	RAB33A	70	41.566
ENSCLAG00000006053	-	90	32.836	ENSCLAG00000000494	RAB9A	97	32.836
ENSCLAG00000006053	-	90	46.907	ENSCLAG00000006992	RAB31	98	46.907
ENSCLAG00000006053	-	90	43.299	ENSCLAG00000014766	RAB1A	95	43.299
ENSCLAG00000006053	-	89	38.614	ENSCLAG00000009500	RAB14	94	38.614
ENSCLAG00000006053	-	83	31.720	ENSCLAG00000008212	DNAJC27	68	31.720
ENSCLAG00000006053	-	75	32.515	ENSCLAG00000005888	NRAS	85	32.515
ENSCLAG00000006053	-	90	38.308	ENSCLAG00000003133	RAB33B	86	38.308
ENSCLAG00000006053	-	100	86.111	ENSCLAG00000016650	RAB5C	100	86.111
ENSCLAG00000006053	-	71	34.641	ENSCLAG00000017218	-	67	34.641
ENSCLAG00000006053	-	95	41.546	ENSCLAG00000015536	RAB6A	98	41.546
ENSCLAG00000006053	-	74	38.125	ENSCLAG00000000797	RAB23	67	38.125
ENSCLAG00000006053	-	91	42.718	ENSCLAG00000003207	RAB11B	94	42.718

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006053	-	100	99.070	ENSG00000144566	RAB5A	100	99.070	Homo_sapiens
ENSCLAG00000006053	-	100	91.667	ENSAPOG00000021391	rab5aa	100	91.667	Acanthochromis_polyacanthus
ENSCLAG00000006053	-	100	99.070	ENSAMEG00000000954	RAB5A	100	99.070	Ailuropoda_melanoleuca
ENSCLAG00000006053	-	100	92.130	ENSACIG00000019251	rab5aa	100	92.130	Amphilophus_citrinellus
ENSCLAG00000006053	-	100	92.593	ENSAOCG00000000090	rab5aa	100	92.593	Amphiprion_ocellaris
ENSCLAG00000006053	-	100	92.593	ENSAPEG00000013376	rab5aa	100	92.593	Amphiprion_percula
ENSCLAG00000006053	-	100	92.130	ENSATEG00000014748	rab5aa	100	92.130	Anabas_testudineus
ENSCLAG00000006053	-	100	95.349	ENSACAG00000000017	RAB5A	100	95.349	Anolis_carolinensis
ENSCLAG00000006053	-	100	99.070	ENSANAG00000025120	RAB5A	100	99.070	Aotus_nancymaae
ENSCLAG00000006053	-	100	92.593	ENSACLG00000018066	rab5aa	100	92.593	Astatotilapia_calliptera
ENSCLAG00000006053	-	100	91.667	ENSAMXG00000036179	rab5aa	100	91.667	Astyanax_mexicanus
ENSCLAG00000006053	-	100	89.401	ENSAMXG00000035919	rab5ab	100	89.401	Astyanax_mexicanus
ENSCLAG00000006053	-	100	98.605	ENSBTAG00000046385	RAB5A	100	98.605	Bos_taurus
ENSCLAG00000006053	-	100	99.070	ENSCJAG00000048394	RAB5A	100	99.070	Callithrix_jacchus
ENSCLAG00000006053	-	100	99.070	ENSCAFG00000005814	RAB5A	100	99.070	Canis_familiaris
ENSCLAG00000006053	-	100	99.070	ENSCAFG00020027287	RAB5A	100	99.070	Canis_lupus_dingo
ENSCLAG00000006053	-	100	98.140	ENSCHIG00000025419	-	100	98.140	Capra_hircus
ENSCLAG00000006053	-	100	98.605	ENSTSYG00000007642	-	100	98.605	Carlito_syrichta
ENSCLAG00000006053	-	100	92.558	ENSTSYG00000030238	-	100	92.558	Carlito_syrichta
ENSCLAG00000006053	-	100	99.070	ENSCCAG00000022405	RAB5A	100	99.070	Cebus_capucinus
ENSCLAG00000006053	-	100	99.070	ENSCATG00000033588	-	100	99.070	Cercocebus_atys
ENSCLAG00000006053	-	100	99.070	ENSCSAG00000009831	RAB5A	100	99.070	Chlorocebus_sabaeus
ENSCLAG00000006053	-	100	95.349	ENSCPBG00000022559	RAB5A	100	95.349	Chrysemys_picta_bellii
ENSCLAG00000006053	-	100	99.070	ENSCANG00000043514	RAB5A	100	99.070	Colobus_angolensis_palliatus
ENSCLAG00000006053	-	100	97.209	ENSCGRG00001020018	-	100	97.209	Cricetulus_griseus_chok1gshd
ENSCLAG00000006053	-	100	97.209	ENSCGRG00000002786	-	100	97.209	Cricetulus_griseus_crigri
ENSCLAG00000006053	-	99	92.558	ENSCVAG00000008239	rab5aa	99	92.558	Cyprinodon_variegatus
ENSCLAG00000006053	-	100	92.593	ENSDARG00000018602	rab5aa	100	92.593	Danio_rerio
ENSCLAG00000006053	-	99	91.628	ENSDARG00000007257	rab5ab	99	91.628	Danio_rerio
ENSCLAG00000006053	-	100	98.605	ENSDNOG00000038467	RAB5A	100	98.605	Dasypus_novemcinctus
ENSCLAG00000006053	-	100	99.070	ENSDORG00000024958	-	100	99.070	Dipodomys_ordii
ENSCLAG00000006053	-	100	98.605	ENSEASG00005005818	RAB5A	100	98.605	Equus_asinus_asinus
ENSCLAG00000006053	-	100	99.070	ENSECAG00000019062	RAB5A	100	99.070	Equus_caballus
ENSCLAG00000006053	-	100	98.140	ENSEEUG00000009044	RAB5A	100	98.140	Erinaceus_europaeus
ENSCLAG00000006053	-	99	91.628	ENSELUG00000013436	rab5ab	99	91.628	Esox_lucius
ENSCLAG00000006053	-	100	93.056	ENSELUG00000006462	rab5aa	100	93.056	Esox_lucius
ENSCLAG00000006053	-	100	99.070	ENSFCAG00000039795	-	100	99.070	Felis_catus
ENSCLAG00000006053	-	100	95.814	ENSFALG00000009239	RAB5A	100	95.814	Ficedula_albicollis
ENSCLAG00000006053	-	100	99.070	ENSFDAG00000005631	-	100	99.070	Fukomys_damarensis
ENSCLAG00000006053	-	99	92.558	ENSFHEG00000014070	rab5aa	99	92.558	Fundulus_heteroclitus
ENSCLAG00000006053	-	84	93.370	ENSGMOG00000007127	RAB5A	99	93.370	Gadus_morhua
ENSCLAG00000006053	-	99	90.698	ENSGMOG00000002868	rab5aa	99	90.698	Gadus_morhua
ENSCLAG00000006053	-	100	95.814	ENSGALG00000011272	RAB5A	100	95.814	Gallus_gallus
ENSCLAG00000006053	-	99	92.558	ENSGAFG00000011619	rab5aa	99	92.558	Gambusia_affinis
ENSCLAG00000006053	-	100	90.741	ENSGACG00000004997	rab5aa	100	90.741	Gasterosteus_aculeatus
ENSCLAG00000006053	-	100	95.814	ENSGAGG00000005319	RAB5A	100	95.814	Gopherus_agassizii
ENSCLAG00000006053	-	100	99.070	ENSGGOG00000015981	RAB5A	100	99.070	Gorilla_gorilla
ENSCLAG00000006053	-	100	92.593	ENSHBUG00000003752	rab5aa	100	92.593	Haplochromis_burtoni
ENSCLAG00000006053	-	99	90.187	ENSHGLG00000017749	-	97	90.187	Heterocephalus_glaber_female
ENSCLAG00000006053	-	97	99.519	ENSHGLG00000006357	-	100	99.519	Heterocephalus_glaber_female
ENSCLAG00000006053	-	100	99.070	ENSHGLG00100007553	RAB5A	100	99.070	Heterocephalus_glaber_male
ENSCLAG00000006053	-	99	90.187	ENSHGLG00100008816	-	97	90.187	Heterocephalus_glaber_male
ENSCLAG00000006053	-	100	89.401	ENSIPUG00000023392	rab5a	100	89.401	Ictalurus_punctatus
ENSCLAG00000006053	-	100	98.605	ENSSTOG00000026229	RAB5A	100	98.605	Ictidomys_tridecemlineatus
ENSCLAG00000006053	-	100	96.279	ENSJJAG00000020190	Rab5a	100	96.279	Jaculus_jaculus
ENSCLAG00000006053	-	100	92.130	ENSKMAG00000005111	rab5aa	100	92.130	Kryptolebias_marmoratus
ENSCLAG00000006053	-	98	92.381	ENSLBEG00000002516	rab5aa	93	92.381	Labrus_bergylta
ENSCLAG00000006053	-	100	93.056	ENSLACG00000004663	RAB5A	100	93.056	Latimeria_chalumnae
ENSCLAG00000006053	-	100	92.593	ENSLOCG00000006591	rab5ab	100	92.593	Lepisosteus_oculatus
ENSCLAG00000006053	-	100	98.605	ENSLAFG00000008321	RAB5A	100	98.605	Loxodonta_africana
ENSCLAG00000006053	-	100	99.070	ENSMFAG00000002326	RAB5A	100	99.070	Macaca_fascicularis
ENSCLAG00000006053	-	83	98.883	ENSMMUG00000006992	RAB5A	91	98.883	Macaca_mulatta
ENSCLAG00000006053	-	69	94.631	ENSMMUG00000032398	-	87	94.631	Macaca_mulatta
ENSCLAG00000006053	-	100	99.070	ENSMNEG00000039149	-	100	99.070	Macaca_nemestrina
ENSCLAG00000006053	-	100	99.070	ENSMLEG00000028944	RAB5A	100	99.070	Mandrillus_leucophaeus
ENSCLAG00000006053	-	100	92.593	ENSMAMG00000012573	rab5aa	100	92.593	Mastacembelus_armatus
ENSCLAG00000006053	-	100	92.593	ENSMZEG00005005205	rab5aa	100	92.593	Maylandia_zebra
ENSCLAG00000006053	-	100	96.279	ENSMGAG00000010961	RAB5A	100	96.279	Meleagris_gallopavo
ENSCLAG00000006053	-	100	98.140	ENSMAUG00000011242	-	100	98.140	Mesocricetus_auratus
ENSCLAG00000006053	-	100	99.070	ENSMICG00000049130	RAB5A	100	99.070	Microcebus_murinus
ENSCLAG00000006053	-	100	97.674	ENSMOCG00000009706	Rab5a	100	97.674	Microtus_ochrogaster
ENSCLAG00000006053	-	100	91.204	ENSMMOG00000019135	rab5aa	100	91.204	Mola_mola
ENSCLAG00000006053	-	100	97.674	ENSMODG00000014793	RAB5A	100	97.674	Monodelphis_domestica
ENSCLAG00000006053	-	100	91.204	ENSMALG00000014929	rab5aa	100	91.204	Monopterus_albus
ENSCLAG00000006053	-	100	98.140	MGP_CAROLIEiJ_G0021741	Rab5a	100	98.140	Mus_caroli
ENSCLAG00000006053	-	100	98.140	ENSMUSG00000017831	Rab5a	100	98.140	Mus_musculus
ENSCLAG00000006053	-	87	95.699	MGP_PahariEiJ_G0020730	Rab5a	99	95.699	Mus_pahari
ENSCLAG00000006053	-	100	99.070	ENSMPUG00000013147	RAB5A	100	99.070	Mustela_putorius_furo
ENSCLAG00000006053	-	100	99.070	ENSMLUG00000011716	RAB5A	100	99.070	Myotis_lucifugus
ENSCLAG00000006053	-	100	98.140	ENSNGAG00000021245	-	100	98.140	Nannospalax_galili
ENSCLAG00000006053	-	100	92.593	ENSNBRG00000011763	rab5aa	100	92.593	Neolamprologus_brichardi
ENSCLAG00000006053	-	100	98.605	ENSNLEG00000003434	RAB5A	100	98.605	Nomascus_leucogenys
ENSCLAG00000006053	-	82	98.870	ENSOPRG00000011278	RAB5A	100	98.870	Ochotona_princeps
ENSCLAG00000006053	-	68	99.315	ENSODEG00000000290	-	99	99.315	Octodon_degus
ENSCLAG00000006053	-	87	90.000	ENSODEG00000019065	-	100	90.000	Octodon_degus
ENSCLAG00000006053	-	100	92.593	ENSONIG00000002425	rab5aa	100	92.593	Oreochromis_niloticus
ENSCLAG00000006053	-	99	96.698	ENSOANG00000004989	RAB5A	97	96.698	Ornithorhynchus_anatinus
ENSCLAG00000006053	-	100	98.605	ENSOCUG00000012200	RAB5A	100	98.605	Oryctolagus_cuniculus
ENSCLAG00000006053	-	100	91.667	ENSORLG00000012261	rab5aa	100	91.667	Oryzias_latipes
ENSCLAG00000006053	-	100	91.667	ENSORLG00020020922	rab5aa	100	91.667	Oryzias_latipes_hni
ENSCLAG00000006053	-	100	90.278	ENSORLG00015017737	rab5ab	100	90.278	Oryzias_latipes_hsok
ENSCLAG00000006053	-	100	91.667	ENSORLG00015012854	rab5aa	100	91.667	Oryzias_latipes_hsok
ENSCLAG00000006053	-	100	92.593	ENSOMEG00000010692	rab5aa	100	92.593	Oryzias_melastigma
ENSCLAG00000006053	-	100	98.140	ENSOARG00000015722	RAB5A	100	98.140	Ovis_aries
ENSCLAG00000006053	-	100	98.611	ENSPPAG00000041763	RAB5A	100	98.611	Pan_paniscus
ENSCLAG00000006053	-	100	99.070	ENSPPRG00000001655	-	100	99.070	Panthera_pardus
ENSCLAG00000006053	-	100	99.070	ENSPTIG00000021685	RAB5A	100	99.070	Panthera_tigris_altaica
ENSCLAG00000006053	-	100	98.611	ENSPTRG00000014682	RAB5A	100	98.611	Pan_troglodytes
ENSCLAG00000006053	-	100	99.070	ENSPANG00000001328	RAB5A	100	99.070	Papio_anubis
ENSCLAG00000006053	-	100	92.593	ENSPKIG00000009578	rab5ab	100	92.593	Paramormyrops_kingsleyae
ENSCLAG00000006053	-	100	88.426	ENSPKIG00000010291	RAB5A	100	88.426	Paramormyrops_kingsleyae
ENSCLAG00000006053	-	100	96.279	ENSPSIG00000007157	RAB5A	100	96.279	Pelodiscus_sinensis
ENSCLAG00000006053	-	100	91.667	ENSPMGG00000001915	rab5aa	100	91.667	Periophthalmus_magnuspinnatus
ENSCLAG00000006053	-	100	98.605	ENSPCIG00000018321	RAB5A	100	98.605	Phascolarctos_cinereus
ENSCLAG00000006053	-	99	93.023	ENSPFOG00000011263	rab5aa	99	93.023	Poecilia_formosa
ENSCLAG00000006053	-	99	93.023	ENSPLAG00000017838	rab5aa	99	93.023	Poecilia_latipinna
ENSCLAG00000006053	-	99	93.023	ENSPMEG00000007238	rab5aa	99	93.023	Poecilia_mexicana
ENSCLAG00000006053	-	100	98.605	ENSPPYG00000014074	RAB5A	100	98.605	Pongo_abelii
ENSCLAG00000006053	-	100	99.070	ENSPCOG00000013289	RAB5A	100	99.070	Propithecus_coquereli
ENSCLAG00000006053	-	100	98.605	ENSPVAG00000006730	RAB5A	100	98.605	Pteropus_vampyrus
ENSCLAG00000006053	-	100	92.593	ENSPNYG00000010612	rab5aa	100	92.593	Pundamilia_nyererei
ENSCLAG00000006053	-	100	89.401	ENSPNAG00000009496	rab5ab	100	89.401	Pygocentrus_nattereri
ENSCLAG00000006053	-	100	91.667	ENSPNAG00000023223	rab5aa	100	91.667	Pygocentrus_nattereri
ENSCLAG00000006053	-	100	99.070	ENSRBIG00000036122	RAB5A	100	99.070	Rhinopithecus_bieti
ENSCLAG00000006053	-	100	99.070	ENSRROG00000037687	RAB5A	100	99.070	Rhinopithecus_roxellana
ENSCLAG00000006053	-	100	98.148	ENSSHAG00000006787	RAB5A	100	98.148	Sarcophilus_harrisii
ENSCLAG00000006053	-	100	92.593	ENSSFOG00015014517	rab5a	100	92.593	Scleropages_formosus
ENSCLAG00000006053	-	98	91.469	ENSSFOG00015021115	-	98	91.469	Scleropages_formosus
ENSCLAG00000006053	-	100	92.130	ENSSMAG00000009229	rab5aa	100	92.130	Scophthalmus_maximus
ENSCLAG00000006053	-	100	92.593	ENSSDUG00000009835	rab5aa	100	92.593	Seriola_dumerili
ENSCLAG00000006053	-	100	92.593	ENSSLDG00000011069	rab5aa	100	92.593	Seriola_lalandi_dorsalis
ENSCLAG00000006053	-	87	97.861	ENSSPUG00000001173	RAB5A	96	97.861	Sphenodon_punctatus
ENSCLAG00000006053	-	100	91.667	ENSSPAG00000015678	rab5aa	100	91.667	Stegastes_partitus
ENSCLAG00000006053	-	100	97.674	ENSSSCG00000037653	RAB5A	100	97.674	Sus_scrofa
ENSCLAG00000006053	-	100	95.814	ENSTGUG00000003236	RAB5A	100	95.814	Taeniopygia_guttata
ENSCLAG00000006053	-	99	90.698	ENSTRUG00000024368	rab5aa	99	90.698	Takifugu_rubripes
ENSCLAG00000006053	-	100	90.741	ENSTNIG00000009196	rab5aa	100	90.741	Tetraodon_nigroviridis
ENSCLAG00000006053	-	100	99.070	ENSTTRG00000001374	RAB5A	100	99.070	Tursiops_truncatus
ENSCLAG00000006053	-	100	93.013	ENSUAMG00000027471	RAB5A	99	97.268	Ursus_americanus
ENSCLAG00000006053	-	100	99.070	ENSUMAG00000018295	RAB5A	100	99.070	Ursus_maritimus
ENSCLAG00000006053	-	100	99.070	ENSVVUG00000000489	RAB5A	100	99.070	Vulpes_vulpes
ENSCLAG00000006053	-	100	92.593	ENSXETG00000002305	rab5a	100	92.593	Xenopus_tropicalis
ENSCLAG00000006053	-	99	92.558	ENSXCOG00000020121	rab5aa	99	92.558	Xiphophorus_couchianus
ENSCLAG00000006053	-	99	93.023	ENSXMAG00000028889	rab5aa	99	93.023	Xiphophorus_maculatus