EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000006093 (Gene tree)
Gene ID: 102023479
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 9016 bases
Position: chrJH721946.1:7880259-7889274
Accession: 102023479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008703	B3_4	PF03483.17	6.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008831	LRRC47-201	1960	XM_005404136	ENSCLAP00000008703	578 (aa)	XP_005404193	UPI00038EE48C

Gene Model

Click here to download ENSCLAG00000006093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006093	LRRC47	100	89.194	ENSG00000130764	LRRC47	100	88.679	Homo_sapiens
ENSCLAG00000006093	LRRC47	99	53.833	ENSAPOG00000019553	lrrc47	99	53.833	Acanthochromis_polyacanthus
ENSCLAG00000006093	LRRC47	79	75.870	ENSAMEG00000009152	LRRC47	100	75.870	Ailuropoda_melanoleuca
ENSCLAG00000006093	LRRC47	66	66.319	ENSAPLG00000003167	LRRC47	100	66.319	Anas_platyrhynchos
ENSCLAG00000006093	LRRC47	65	66.755	ENSACAG00000008267	LRRC47	99	66.667	Anolis_carolinensis
ENSCLAG00000006093	LRRC47	100	86.964	ENSANAG00000025576	LRRC47	100	86.449	Aotus_nancymaae
ENSCLAG00000006093	LRRC47	99	82.842	ENSBTAG00000004738	LRRC47	99	82.414	Bos_taurus
ENSCLAG00000006093	LRRC47	99	82.087	ENSCAFG00000019492	LRRC47	99	81.583	Canis_familiaris
ENSCLAG00000006093	LRRC47	99	82.118	ENSCAFG00020009667	LRRC47	99	82.404	Canis_lupus_dingo
ENSCLAG00000006093	LRRC47	99	83.016	ENSCHIG00000022607	LRRC47	98	82.548	Capra_hircus
ENSCLAG00000006093	LRRC47	96	87.253	ENSTSYG00000009326	LRRC47	96	86.535	Carlito_syrichta
ENSCLAG00000006093	LRRC47	65	88.830	ENSCAPG00000016517	LRRC47	100	88.830	Cavia_aperea
ENSCLAG00000006093	LRRC47	100	92.083	ENSCPOG00000014931	LRRC47	96	92.083	Cavia_porcellus
ENSCLAG00000006093	LRRC47	100	87.307	ENSCCAG00000024895	LRRC47	100	86.792	Cebus_capucinus
ENSCLAG00000006093	LRRC47	100	89.880	ENSCATG00000029337	LRRC47	100	89.365	Cercocebus_atys
ENSCLAG00000006093	LRRC47	100	90.223	ENSCSAG00000000727	LRRC47	100	89.708	Chlorocebus_sabaeus
ENSCLAG00000006093	LRRC47	99	61.356	ENSCPBG00000019404	LRRC47	98	61.186	Chrysemys_picta_bellii
ENSCLAG00000006093	LRRC47	78	86.551	ENSCANG00000030701	LRRC47	96	85.900	Colobus_angolensis_palliatus
ENSCLAG00000006093	LRRC47	99	85.889	ENSCGRG00001015159	Lrrc47	90	85.665	Cricetulus_griseus_chok1gshd
ENSCLAG00000006093	LRRC47	65	80.851	ENSCGRG00000017336	Lrrc47	100	81.117	Cricetulus_griseus_crigri
ENSCLAG00000006093	LRRC47	99	52.105	ENSCSEG00000006217	lrrc47	95	52.632	Cynoglossus_semilaevis
ENSCLAG00000006093	LRRC47	64	83.245	ENSDORG00000016594	Lrrc47	99	84.043	Dipodomys_ordii
ENSCLAG00000006093	LRRC47	100	83.533	ENSEASG00005021788	LRRC47	100	84.048	Equus_asinus_asinus
ENSCLAG00000006093	LRRC47	99	83.391	ENSECAG00000022472	LRRC47	91	84.220	Equus_caballus
ENSCLAG00000006093	LRRC47	99	50.685	ENSELUG00000017544	lrrc47	97	51.027	Esox_lucius
ENSCLAG00000006093	LRRC47	96	82.290	ENSFCAG00000011632	LRRC47	99	82.060	Felis_catus
ENSCLAG00000006093	LRRC47	78	62.667	ENSFALG00000009631	LRRC47	99	61.982	Ficedula_albicollis
ENSCLAG00000006093	LRRC47	97	52.660	ENSGMOG00000015674	lrrc47	97	52.305	Gadus_morhua
ENSCLAG00000006093	LRRC47	99	62.003	ENSGALG00000050995	LRRC47	100	62.284	Gallus_gallus
ENSCLAG00000006093	LRRC47	99	53.240	ENSGACG00000005550	lrrc47	99	53.147	Gasterosteus_aculeatus
ENSCLAG00000006093	LRRC47	99	63.468	ENSGAGG00000022584	LRRC47	99	63.378	Gopherus_agassizii
ENSCLAG00000006093	LRRC47	100	89.537	ENSGGOG00000015571	LRRC47	100	89.022	Gorilla_gorilla
ENSCLAG00000006093	LRRC47	100	91.910	ENSHGLG00000018278	LRRC47	96	91.910	Heterocephalus_glaber_female
ENSCLAG00000006093	LRRC47	69	90.323	ENSHGLG00100008507	LRRC47	100	90.323	Heterocephalus_glaber_male
ENSCLAG00000006093	LRRC47	99	54.021	ENSHCOG00000006348	lrrc47	97	53.913	Hippocampus_comes
ENSCLAG00000006093	LRRC47	100	89.157	ENSSTOG00000027559	LRRC47	100	89.329	Ictidomys_tridecemlineatus
ENSCLAG00000006093	LRRC47	99	88.696	ENSJJAG00000017474	Lrrc47	97	88.468	Jaculus_jaculus
ENSCLAG00000006093	LRRC47	99	52.613	ENSKMAG00000003414	lrrc47	99	52.613	Kryptolebias_marmoratus
ENSCLAG00000006093	LRRC47	100	84.563	ENSLAFG00000011657	LRRC47	99	84.391	Loxodonta_africana
ENSCLAG00000006093	LRRC47	100	69.610	ENSMFAG00000045730	LRRC47	90	95.631	Macaca_fascicularis
ENSCLAG00000006093	LRRC47	99	90.138	ENSMNEG00000042488	LRRC47	99	89.519	Macaca_nemestrina
ENSCLAG00000006093	LRRC47	77	85.588	ENSMLEG00000043735	LRRC47	91	84.922	Mandrillus_leucophaeus
ENSCLAG00000006093	LRRC47	99	86.655	ENSMAUG00000021337	Lrrc47	98	86.828	Mesocricetus_auratus
ENSCLAG00000006093	LRRC47	100	85.739	ENSMICG00000026816	LRRC47	100	85.052	Microcebus_murinus
ENSCLAG00000006093	LRRC47	100	85.467	ENSMOCG00000021279	Lrrc47	100	87.370	Microtus_ochrogaster
ENSCLAG00000006093	LRRC47	99	53.403	ENSMMOG00000017007	lrrc47	99	53.054	Mola_mola
ENSCLAG00000006093	LRRC47	99	72.077	ENSMODG00000006554	LRRC47	99	71.799	Monodelphis_domestica
ENSCLAG00000006093	LRRC47	99	87.674	MGP_CAROLIEiJ_G0026864	Lrrc47	99	87.414	Mus_caroli
ENSCLAG00000006093	LRRC47	99	87.500	ENSMUSG00000029028	Lrrc47	99	87.241	Mus_musculus
ENSCLAG00000006093	LRRC47	99	85.739	MGP_PahariEiJ_G0029212	Lrrc47	99	87.241	Mus_pahari
ENSCLAG00000006093	LRRC47	99	87.674	MGP_SPRETEiJ_G0027857	Lrrc47	99	87.414	Mus_spretus
ENSCLAG00000006093	LRRC47	65	75.132	ENSMPUG00000007321	LRRC47	75	75.132	Mustela_putorius_furo
ENSCLAG00000006093	LRRC47	98	86.364	ENSNGAG00000022153	Lrrc47	99	86.059	Nannospalax_galili
ENSCLAG00000006093	LRRC47	100	85.420	ENSNLEG00000008131	LRRC47	100	84.906	Nomascus_leucogenys
ENSCLAG00000006093	LRRC47	84	92.843	ENSODEG00000010882	LRRC47	93	92.843	Octodon_degus
ENSCLAG00000006093	LRRC47	96	55.495	ENSORLG00000002532	lrrc47	99	55.676	Oryzias_latipes
ENSCLAG00000006093	LRRC47	99	55.497	ENSORLG00020019601	lrrc47	99	55.672	Oryzias_latipes_hni
ENSCLAG00000006093	LRRC47	99	54.974	ENSORLG00015014040	lrrc47	99	54.799	Oryzias_latipes_hsok
ENSCLAG00000006093	LRRC47	99	54.799	ENSOMEG00000008989	lrrc47	99	54.625	Oryzias_melastigma
ENSCLAG00000006093	LRRC47	100	85.763	ENSOGAG00000001553	LRRC47	100	85.249	Otolemur_garnettii
ENSCLAG00000006093	LRRC47	99	79.549	ENSOARG00000015290	LRRC47	99	79.138	Ovis_aries
ENSCLAG00000006093	LRRC47	98	86.417	ENSPPAG00000036370	-	100	85.714	Pan_paniscus
ENSCLAG00000006093	LRRC47	99	83.189	ENSPPRG00000005261	LRRC47	99	82.960	Panthera_pardus
ENSCLAG00000006093	LRRC47	100	89.365	ENSPTRG00000000068	LRRC47	100	88.851	Pan_troglodytes
ENSCLAG00000006093	LRRC47	100	89.880	ENSPANG00000012437	LRRC47	100	89.365	Papio_anubis
ENSCLAG00000006093	LRRC47	65	66.402	ENSPSIG00000004196	LRRC47	100	65.608	Pelodiscus_sinensis
ENSCLAG00000006093	LRRC47	65	83.511	ENSPEMG00000021068	Lrrc47	100	83.777	Peromyscus_maniculatus_bairdii
ENSCLAG00000006093	LRRC47	98	73.030	ENSPCIG00000003638	LRRC47	100	75.043	Phascolarctos_cinereus
ENSCLAG00000006093	LRRC47	93	55.000	ENSPFOG00000000992	lrrc47	94	55.000	Poecilia_formosa
ENSCLAG00000006093	LRRC47	99	54.912	ENSPLAG00000008077	lrrc47	99	54.912	Poecilia_latipinna
ENSCLAG00000006093	LRRC47	99	54.912	ENSPMEG00000007367	lrrc47	99	54.912	Poecilia_mexicana
ENSCLAG00000006093	LRRC47	100	89.194	ENSPPYG00000001960	LRRC47	100	88.679	Pongo_abelii
ENSCLAG00000006093	LRRC47	99	87.175	ENSPCOG00000019161	LRRC47	99	86.575	Propithecus_coquereli
ENSCLAG00000006093	LRRC47	100	81.207	ENSPVAG00000009839	LRRC47	100	81.552	Pteropus_vampyrus
ENSCLAG00000006093	LRRC47	100	53.265	ENSPNAG00000017982	lrrc47	100	53.265	Pygocentrus_nattereri
ENSCLAG00000006093	LRRC47	99	85.690	ENSRNOG00000024796	Lrrc47	99	87.414	Rattus_norvegicus
ENSCLAG00000006093	LRRC47	100	89.880	ENSRBIG00000019437	LRRC47	100	89.365	Rhinopithecus_bieti
ENSCLAG00000006093	LRRC47	100	89.880	ENSRROG00000043182	LRRC47	100	89.365	Rhinopithecus_roxellana
ENSCLAG00000006093	LRRC47	81	82.563	ENSSBOG00000026334	LRRC47	97	82.105	Saimiri_boliviensis_boliviensis
ENSCLAG00000006093	LRRC47	98	59.138	ENSSHAG00000007360	LRRC47	99	60.951	Sarcophilus_harrisii
ENSCLAG00000006093	LRRC47	99	54.545	ENSSMAG00000009344	lrrc47	99	54.895	Scophthalmus_maximus
ENSCLAG00000006093	LRRC47	97	54.174	ENSSDUG00000014618	lrrc47	97	54.529	Seriola_dumerili
ENSCLAG00000006093	LRRC47	97	54.885	ENSSLDG00000018908	lrrc47	97	54.885	Seriola_lalandi_dorsalis
ENSCLAG00000006093	LRRC47	99	61.329	ENSSPUG00000010277	LRRC47	99	60.708	Sphenodon_punctatus
ENSCLAG00000006093	LRRC47	99	55.401	ENSSPAG00000005188	lrrc47	99	55.401	Stegastes_partitus
ENSCLAG00000006093	LRRC47	99	80.895	ENSSSCG00000039516	LRRC47	99	82.272	Sus_scrofa
ENSCLAG00000006093	LRRC47	70	65.679	ENSTGUG00000002737	LRRC47	99	64.356	Taeniopygia_guttata
ENSCLAG00000006093	LRRC47	99	51.839	ENSTRUG00000017696	lrrc47	99	52.189	Takifugu_rubripes
ENSCLAG00000006093	LRRC47	99	52.014	ENSTNIG00000010923	lrrc47	99	51.664	Tetraodon_nigroviridis
ENSCLAG00000006093	LRRC47	100	81.132	ENSTTRG00000011751	LRRC47	100	82.161	Tursiops_truncatus
ENSCLAG00000006093	LRRC47	88	80.507	ENSUAMG00000012080	LRRC47	97	80.702	Ursus_americanus
ENSCLAG00000006093	LRRC47	65	75.066	ENSUMAG00000010781	LRRC47	81	75.328	Ursus_maritimus
ENSCLAG00000006093	LRRC47	99	73.639	ENSVVUG00000027118	LRRC47	99	72.089	Vulpes_vulpes
ENSCLAG00000006093	LRRC47	99	60.377	ENSXETG00000006029	lrrc47	99	60.549	Xenopus_tropicalis
ENSCLAG00000006093	LRRC47	98	54.657	ENSXCOG00000002813	lrrc47	98	54.482	Xiphophorus_couchianus
ENSCLAG00000006093	LRRC47	99	54.211	ENSXMAG00000019386	lrrc47	99	54.386	Xiphophorus_maculatus