EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000006125 (Gene tree)
Gene ID: 102005077
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 22757 bases
Position: chrJH721895.1:5018944-5041700
Accession: 102005077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008762	RTC	PF01137.21	9.4e-67	1	1
ENSCLAP00000008762	RTC_insert	PF05189.13	2.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008890	RTCA-201	1997	XM_005388796	ENSCLAP00000008762	316 (aa)	XP_005388853	-

Gene Model

Click here to download ENSCLAG00000006125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006125	RTCA	100	95.584	ENSG00000137996	RTCA	87	95.584	Homo_sapiens
ENSCLAG00000006125	RTCA	100	72.468	ENSAPOG00000001345	rtca	86	72.468	Acanthochromis_polyacanthus
ENSCLAG00000006125	RTCA	85	94.424	ENSAMEG00000008855	RTCA	100	94.424	Ailuropoda_melanoleuca
ENSCLAG00000006125	RTCA	100	72.468	ENSACIG00000019643	rtca	87	72.468	Amphilophus_citrinellus
ENSCLAG00000006125	RTCA	100	72.468	ENSAOCG00000014979	rtca	86	72.468	Amphiprion_ocellaris
ENSCLAG00000006125	RTCA	100	72.468	ENSAPEG00000006945	rtca	86	72.468	Amphiprion_percula
ENSCLAG00000006125	RTCA	100	72.152	ENSATEG00000006315	rtca	87	72.152	Anabas_testudineus
ENSCLAG00000006125	RTCA	100	81.329	ENSAPLG00000015430	RTCA	90	81.329	Anas_platyrhynchos
ENSCLAG00000006125	RTCA	100	94.953	ENSANAG00000025446	RTCA	87	94.953	Aotus_nancymaae
ENSCLAG00000006125	RTCA	100	71.835	ENSACLG00000020770	rtca	86	71.835	Astatotilapia_calliptera
ENSCLAG00000006125	RTCA	100	73.734	ENSAMXG00000043271	rtca	87	73.734	Astyanax_mexicanus
ENSCLAG00000006125	RTCA	100	94.953	ENSBTAG00000006321	RTCA	87	94.953	Bos_taurus
ENSCLAG00000006125	RTCA	100	94.953	ENSCJAG00000003398	RTCA	87	94.953	Callithrix_jacchus
ENSCLAG00000006125	RTCA	100	94.637	ENSCAFG00000020010	RTCA	59	94.637	Canis_familiaris
ENSCLAG00000006125	RTCA	100	94.637	ENSCAFG00020011528	RTCA	50	94.637	Canis_lupus_dingo
ENSCLAG00000006125	RTCA	100	94.637	ENSCHIG00000018937	RTCA	87	94.637	Capra_hircus
ENSCLAG00000006125	RTCA	100	93.691	ENSTSYG00000011305	RTCA	87	93.691	Carlito_syrichta
ENSCLAG00000006125	RTCA	100	94.953	ENSCCAG00000021844	RTCA	87	94.953	Cebus_capucinus
ENSCLAG00000006125	RTCA	100	95.899	ENSCATG00000019364	RTCA	100	95.793	Cercocebus_atys
ENSCLAG00000006125	RTCA	100	96.215	ENSCSAG00000001509	RTCA	87	96.215	Chlorocebus_sabaeus
ENSCLAG00000006125	RTCA	100	94.006	ENSCHOG00000005211	RTCA	87	94.006	Choloepus_hoffmanni
ENSCLAG00000006125	RTCA	100	83.861	ENSCPBG00000026658	RTCA	87	83.861	Chrysemys_picta_bellii
ENSCLAG00000006125	RTCA	100	54.890	ENSCING00000007875	-	86	54.890	Ciona_intestinalis
ENSCLAG00000006125	RTCA	100	53.165	ENSCSAVG00000007269	-	86	53.165	Ciona_savignyi
ENSCLAG00000006125	RTCA	100	95.899	ENSCANG00000040106	RTCA	87	95.899	Colobus_angolensis_palliatus
ENSCLAG00000006125	RTCA	85	91.450	ENSCGRG00001013163	Rtca	85	91.450	Cricetulus_griseus_chok1gshd
ENSCLAG00000006125	RTCA	100	69.620	ENSCSEG00000000530	rtca	85	69.620	Cynoglossus_semilaevis
ENSCLAG00000006125	RTCA	72	75.771	ENSCVAG00000021809	rtca	66	75.771	Cyprinodon_variegatus
ENSCLAG00000006125	RTCA	100	75.000	ENSDARG00000002215	rtca	87	75.000	Danio_rerio
ENSCLAG00000006125	RTCA	100	94.322	ENSDNOG00000000456	RTCA	87	94.322	Dasypus_novemcinctus
ENSCLAG00000006125	RTCA	100	92.429	ENSDORG00000005448	Rtca	87	92.429	Dipodomys_ordii
ENSCLAG00000006125	RTCA	99	35.256	FBgn0025630	Rtca	85	35.256	Drosophila_melanogaster
ENSCLAG00000006125	RTCA	94	53.535	ENSEBUG00000008556	rtca	80	53.535	Eptatretus_burgeri
ENSCLAG00000006125	RTCA	100	94.322	ENSEASG00005015926	RTCA	87	94.322	Equus_asinus_asinus
ENSCLAG00000006125	RTCA	100	94.322	ENSECAG00000019831	RTCA	87	94.322	Equus_caballus
ENSCLAG00000006125	RTCA	90	85.563	ENSEEUG00000001165	RTCA	82	85.563	Erinaceus_europaeus
ENSCLAG00000006125	RTCA	100	71.835	ENSELUG00000003741	rtca	87	71.835	Esox_lucius
ENSCLAG00000006125	RTCA	100	94.953	ENSFCAG00000024460	RTCA	87	94.953	Felis_catus
ENSCLAG00000006125	RTCA	90	83.451	ENSFALG00000002443	RTCA	76	83.451	Ficedula_albicollis
ENSCLAG00000006125	RTCA	100	95.584	ENSFDAG00000012070	-	87	95.584	Fukomys_damarensis
ENSCLAG00000006125	RTCA	98	74.441	ENSFDAG00000016084	-	85	74.441	Fukomys_damarensis
ENSCLAG00000006125	RTCA	62	74.872	ENSFHEG00000002868	rtca	92	69.585	Fundulus_heteroclitus
ENSCLAG00000006125	RTCA	100	70.253	ENSGMOG00000013264	rtca	87	70.253	Gadus_morhua
ENSCLAG00000006125	RTCA	100	81.646	ENSGALG00000005277	RTCA	87	81.646	Gallus_gallus
ENSCLAG00000006125	RTCA	100	73.101	ENSGAFG00000011853	rtca	86	73.101	Gambusia_affinis
ENSCLAG00000006125	RTCA	100	70.253	ENSGACG00000013497	rtca	87	70.253	Gasterosteus_aculeatus
ENSCLAG00000006125	RTCA	77	84.426	ENSGAGG00000023306	RTCA	83	84.426	Gopherus_agassizii
ENSCLAG00000006125	RTCA	100	94.637	ENSGGOG00000044018	-	87	94.637	Gorilla_gorilla
ENSCLAG00000006125	RTCA	100	95.584	ENSGGOG00000009546	-	100	95.469	Gorilla_gorilla
ENSCLAG00000006125	RTCA	100	71.519	ENSHBUG00000002114	rtca	86	71.519	Haplochromis_burtoni
ENSCLAG00000006125	RTCA	100	94.953	ENSHGLG00000002617	RTCA	87	94.953	Heterocephalus_glaber_female
ENSCLAG00000006125	RTCA	100	94.953	ENSHGLG00100006056	RTCA	87	94.953	Heterocephalus_glaber_male
ENSCLAG00000006125	RTCA	100	64.873	ENSHCOG00000020628	rtca	77	64.873	Hippocampus_comes
ENSCLAG00000006125	RTCA	100	74.051	ENSIPUG00000024803	rtca	87	74.051	Ictalurus_punctatus
ENSCLAG00000006125	RTCA	100	84.810	ENSSTOG00000033099	-	86	84.810	Ictidomys_tridecemlineatus
ENSCLAG00000006125	RTCA	100	94.637	ENSSTOG00000013528	-	93	94.637	Ictidomys_tridecemlineatus
ENSCLAG00000006125	RTCA	100	63.091	ENSJJAG00000016178	Rtca	83	63.091	Jaculus_jaculus
ENSCLAG00000006125	RTCA	100	72.468	ENSKMAG00000006651	rtca	86	72.468	Kryptolebias_marmoratus
ENSCLAG00000006125	RTCA	100	69.304	ENSLBEG00000002448	-	98	69.304	Labrus_bergylta
ENSCLAG00000006125	RTCA	100	69.304	ENSLBEG00000028971	rtca	87	69.304	Labrus_bergylta
ENSCLAG00000006125	RTCA	100	78.481	ENSLACG00000013666	RTCA	87	78.481	Latimeria_chalumnae
ENSCLAG00000006125	RTCA	100	74.051	ENSLOCG00000000093	rtca	86	74.051	Lepisosteus_oculatus
ENSCLAG00000006125	RTCA	100	93.375	ENSLAFG00000001473	RTCA	87	93.375	Loxodonta_africana
ENSCLAG00000006125	RTCA	100	96.215	ENSMFAG00000034132	RTCA	87	96.215	Macaca_fascicularis
ENSCLAG00000006125	RTCA	100	95.584	ENSMMUG00000019105	RTCA	87	95.584	Macaca_mulatta
ENSCLAG00000006125	RTCA	97	96.117	ENSMNEG00000037163	RTCA	100	96.117	Macaca_nemestrina
ENSCLAG00000006125	RTCA	100	76.025	ENSMLEG00000042151	RTCA	84	76.025	Mandrillus_leucophaeus
ENSCLAG00000006125	RTCA	100	74.051	ENSMAMG00000016536	rtca	87	74.051	Mastacembelus_armatus
ENSCLAG00000006125	RTCA	100	71.835	ENSMZEG00005017945	rtca	86	71.835	Maylandia_zebra
ENSCLAG00000006125	RTCA	100	80.696	ENSMGAG00000006892	RTCA	99	80.696	Meleagris_gallopavo
ENSCLAG00000006125	RTCA	100	92.114	ENSMAUG00000008488	Rtca	87	92.114	Mesocricetus_auratus
ENSCLAG00000006125	RTCA	97	96.117	ENSMICG00000008643	RTCA	100	96.117	Microcebus_murinus
ENSCLAG00000006125	RTCA	100	92.429	ENSMOCG00000016660	Rtca	87	92.429	Microtus_ochrogaster
ENSCLAG00000006125	RTCA	97	72.727	ENSMMOG00000007750	rtca	100	72.727	Mola_mola
ENSCLAG00000006125	RTCA	100	89.274	ENSMODG00000003557	RTCA	87	89.274	Monodelphis_domestica
ENSCLAG00000006125	RTCA	100	73.734	ENSMALG00000020844	rtca	87	73.734	Monopterus_albus
ENSCLAG00000006125	RTCA	100	91.483	MGP_CAROLIEiJ_G0025565	Rtca	100	90.845	Mus_caroli
ENSCLAG00000006125	RTCA	100	90.852	ENSMUSG00000000339	Rtca	100	90.845	Mus_musculus
ENSCLAG00000006125	RTCA	100	91.167	MGP_PahariEiJ_G0027011	Rtca	100	90.141	Mus_pahari
ENSCLAG00000006125	RTCA	100	91.167	MGP_SPRETEiJ_G0026515	Rtca	100	90.141	Mus_spretus
ENSCLAG00000006125	RTCA	100	95.268	ENSMPUG00000012119	RTCA	87	95.268	Mustela_putorius_furo
ENSCLAG00000006125	RTCA	100	88.013	ENSMLUG00000009922	RTCA	87	88.013	Myotis_lucifugus
ENSCLAG00000006125	RTCA	100	91.798	ENSNGAG00000011540	Rtca	92	91.798	Nannospalax_galili
ENSCLAG00000006125	RTCA	100	71.835	ENSNBRG00000003062	rtca	86	71.835	Neolamprologus_brichardi
ENSCLAG00000006125	RTCA	100	95.584	ENSNLEG00000031426	RTCA	87	95.584	Nomascus_leucogenys
ENSCLAG00000006125	RTCA	51	95.122	ENSMEUG00000010030	-	61	72.727	Notamacropus_eugenii
ENSCLAG00000006125	RTCA	85	88.848	ENSOPRG00000012092	RTCA	71	88.848	Ochotona_princeps
ENSCLAG00000006125	RTCA	100	95.899	ENSODEG00000006990	RTCA	87	95.899	Octodon_degus
ENSCLAG00000006125	RTCA	100	71.835	ENSONIG00000007753	rtca	86	71.835	Oreochromis_niloticus
ENSCLAG00000006125	RTCA	100	86.751	ENSOANG00000012055	RTCA	98	86.751	Ornithorhynchus_anatinus
ENSCLAG00000006125	RTCA	100	95.899	ENSOCUG00000014247	RTCA	87	95.899	Oryctolagus_cuniculus
ENSCLAG00000006125	RTCA	100	72.152	ENSORLG00000013605	rtca	87	72.152	Oryzias_latipes
ENSCLAG00000006125	RTCA	100	72.152	ENSORLG00020001904	rtca	87	72.152	Oryzias_latipes_hni
ENSCLAG00000006125	RTCA	100	72.152	ENSORLG00015021064	rtca	87	72.152	Oryzias_latipes_hsok
ENSCLAG00000006125	RTCA	100	73.418	ENSOMEG00000000756	rtca	87	73.418	Oryzias_melastigma
ENSCLAG00000006125	RTCA	98	85.852	ENSOGAG00000005627	RTCA	85	85.852	Otolemur_garnettii
ENSCLAG00000006125	RTCA	100	94.006	ENSOARG00000018122	RTCA	99	94.006	Ovis_aries
ENSCLAG00000006125	RTCA	100	95.268	ENSPPAG00000035119	RTCA	100	95.146	Pan_paniscus
ENSCLAG00000006125	RTCA	100	94.637	ENSPPRG00000000350	RTCA	87	94.637	Panthera_pardus
ENSCLAG00000006125	RTCA	100	94.637	ENSPTIG00000012816	RTCA	87	94.637	Panthera_tigris_altaica
ENSCLAG00000006125	RTCA	100	95.268	ENSPTRG00000001004	RTCA	100	95.146	Pan_troglodytes
ENSCLAG00000006125	RTCA	100	95.584	ENSPANG00000000346	RTCA	87	95.584	Papio_anubis
ENSCLAG00000006125	RTCA	100	75.316	ENSPKIG00000001653	rtca	87	75.316	Paramormyrops_kingsleyae
ENSCLAG00000006125	RTCA	100	83.861	ENSPSIG00000011408	RTCA	87	83.861	Pelodiscus_sinensis
ENSCLAG00000006125	RTCA	100	91.798	ENSPEMG00000018582	Rtca	87	91.798	Peromyscus_maniculatus_bairdii
ENSCLAG00000006125	RTCA	100	57.729	ENSPMAG00000009110	rtca	87	57.729	Petromyzon_marinus
ENSCLAG00000006125	RTCA	100	88.959	ENSPCIG00000007684	RTCA	87	88.959	Phascolarctos_cinereus
ENSCLAG00000006125	RTCA	100	73.734	ENSPFOG00000004824	rtca	86	73.734	Poecilia_formosa
ENSCLAG00000006125	RTCA	100	73.734	ENSPLAG00000011753	rtca	86	73.734	Poecilia_latipinna
ENSCLAG00000006125	RTCA	100	73.734	ENSPMEG00000020469	rtca	86	73.734	Poecilia_mexicana
ENSCLAG00000006125	RTCA	100	74.684	ENSPREG00000001365	rtca	86	74.684	Poecilia_reticulata
ENSCLAG00000006125	RTCA	100	95.584	ENSPPYG00000001115	RTCA	87	95.584	Pongo_abelii
ENSCLAG00000006125	RTCA	100	90.221	ENSPCAG00000005076	RTCA	87	90.221	Procavia_capensis
ENSCLAG00000006125	RTCA	100	96.530	ENSPCOG00000005603	RTCA	87	96.530	Propithecus_coquereli
ENSCLAG00000006125	RTCA	100	93.375	ENSPVAG00000009478	RTCA	84	93.375	Pteropus_vampyrus
ENSCLAG00000006125	RTCA	100	71.835	ENSPNYG00000004722	rtca	86	71.835	Pundamilia_nyererei
ENSCLAG00000006125	RTCA	100	74.051	ENSPNAG00000022270	rtca	87	74.051	Pygocentrus_nattereri
ENSCLAG00000006125	RTCA	100	91.483	ENSRNOG00000014575	Rtca	87	91.483	Rattus_norvegicus
ENSCLAG00000006125	RTCA	100	95.268	ENSRBIG00000041180	RTCA	100	95.146	Rhinopithecus_bieti
ENSCLAG00000006125	RTCA	100	95.268	ENSRROG00000024929	RTCA	87	95.268	Rhinopithecus_roxellana
ENSCLAG00000006125	RTCA	100	94.637	ENSSBOG00000028626	RTCA	87	94.637	Saimiri_boliviensis_boliviensis
ENSCLAG00000006125	RTCA	100	89.590	ENSSHAG00000001758	RTCA	87	89.590	Sarcophilus_harrisii
ENSCLAG00000006125	RTCA	100	70.570	ENSSMAG00000014680	rtca	85	70.570	Scophthalmus_maximus
ENSCLAG00000006125	RTCA	100	72.785	ENSSDUG00000015585	rtca	85	72.785	Seriola_dumerili
ENSCLAG00000006125	RTCA	100	72.468	ENSSLDG00000018985	rtca	86	72.468	Seriola_lalandi_dorsalis
ENSCLAG00000006125	RTCA	100	85.489	ENSSARG00000013993	RTCA	100	85.489	Sorex_araneus
ENSCLAG00000006125	RTCA	100	71.835	ENSSPAG00000011938	rtca	86	71.835	Stegastes_partitus
ENSCLAG00000006125	RTCA	100	94.006	ENSSSCG00000006865	RTCA	87	94.006	Sus_scrofa
ENSCLAG00000006125	RTCA	100	82.595	ENSTGUG00000005154	RTCA	87	82.595	Taeniopygia_guttata
ENSCLAG00000006125	RTCA	100	72.785	ENSTRUG00000008799	rtca	87	72.785	Takifugu_rubripes
ENSCLAG00000006125	RTCA	100	72.785	ENSTNIG00000004725	rtca	87	72.785	Tetraodon_nigroviridis
ENSCLAG00000006125	RTCA	53	95.833	ENSTBEG00000000943	RTCA	65	66.387	Tupaia_belangeri
ENSCLAG00000006125	RTCA	100	94.006	ENSTTRG00000015327	RTCA	84	94.006	Tursiops_truncatus
ENSCLAG00000006125	RTCA	93	92.177	ENSUAMG00000017265	RTCA	83	92.177	Ursus_americanus
ENSCLAG00000006125	RTCA	100	94.322	ENSUMAG00000007881	RTCA	87	94.322	Ursus_maritimus
ENSCLAG00000006125	RTCA	100	84.227	ENSVPAG00000001039	RTCA	84	84.227	Vicugna_pacos
ENSCLAG00000006125	RTCA	100	94.322	ENSVVUG00000022041	RTCA	58	94.322	Vulpes_vulpes
ENSCLAG00000006125	RTCA	99	63.636	ENSXETG00000031661	RTCA	89	61.076	Xenopus_tropicalis
ENSCLAG00000006125	RTCA	100	62.658	ENSXCOG00000008002	rtca	86	62.658	Xiphophorus_couchianus
ENSCLAG00000006125	RTCA	100	73.418	ENSXMAG00000005482	rtca	86	73.418	Xiphophorus_maculatus