EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000006153 (Gene tree)
Gene ID: 102018083
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 34016 bases
Position: chrJH721931.1:12203318-12237333
Accession: 102018083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008802	ResIII	PF04851.15	6.2e-11	1	1
ENSCLAP00000008803	ResIII	PF04851.15	6.6e-11	1	1
ENSCLAP00000008802	DEAD	PF00270.29	3.3e-06	1	1
ENSCLAP00000008803	DEAD	PF00270.29	3.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000008930	SMARCA5-201	7298	XM_013522910	ENSCLAP00000008802	993 (aa)	XP_013378364	-
ENSCLAT00000008931	SMARCA5-202	3072	-	ENSCLAP00000008803	1023 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000006153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000006153	SMARCA5	51	31.250	ENSCLAG00000010476	-	62	31.250
ENSCLAG00000006153	SMARCA5	98	84.709	ENSCLAG00000002171	SMARCA1	93	84.709
ENSCLAG00000006153	SMARCA5	61	39.748	ENSCLAG00000007137	CHD9	56	44.040
ENSCLAG00000006153	SMARCA5	50	46.800	ENSCLAG00000003938	HELLS	63	46.800
ENSCLAG00000006153	SMARCA5	57	42.683	ENSCLAG00000000880	CHD1L	62	43.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006153	SMARCA5	100	99.194	ENSG00000153147	SMARCA5	99	95.115	Homo_sapiens
ENSCLAG00000006153	SMARCA5	100	99.496	ENSAMEG00000009585	SMARCA5	96	98.121	Ailuropoda_melanoleuca
ENSCLAG00000006153	SMARCA5	97	96.612	ENSAPLG00000009206	SMARCA5	100	96.612	Anas_platyrhynchos
ENSCLAG00000006153	SMARCA5	100	96.479	ENSACAG00000003038	SMARCA5	96	96.479	Anolis_carolinensis
ENSCLAG00000006153	SMARCA5	100	99.194	ENSANAG00000019345	SMARCA5	99	99.194	Aotus_nancymaae
ENSCLAG00000006153	SMARCA5	100	99.396	ENSBTAG00000003399	SMARCA5	99	95.307	Bos_taurus
ENSCLAG00000006153	SMARCA5	100	99.295	ENSCJAG00000002735	SMARCA5	99	95.211	Callithrix_jacchus
ENSCLAG00000006153	SMARCA5	100	99.496	ENSCAFG00000007525	SMARCA5	96	98.121	Canis_familiaris
ENSCLAG00000006153	SMARCA5	98	99.486	ENSCAFG00020025641	SMARCA5	95	98.083	Canis_lupus_dingo
ENSCLAG00000006153	SMARCA5	100	97.583	ENSCHIG00000016375	-	95	97.655	Capra_hircus
ENSCLAG00000006153	SMARCA5	100	99.396	ENSCHIG00000013730	-	94	99.396	Capra_hircus
ENSCLAG00000006153	SMARCA5	100	99.295	ENSTSYG00000009954	SMARCA5	99	99.295	Carlito_syrichta
ENSCLAG00000006153	SMARCA5	97	99.483	ENSCAPG00000013747	SMARCA5	95	99.483	Cavia_aperea
ENSCLAG00000006153	SMARCA5	100	99.799	ENSCPOG00000002259	SMARCA5	99	95.781	Cavia_porcellus
ENSCLAG00000006153	SMARCA5	100	99.295	ENSCCAG00000027215	SMARCA5	99	99.295	Cebus_capucinus
ENSCLAG00000006153	SMARCA5	100	99.295	ENSCATG00000044917	SMARCA5	99	95.211	Cercocebus_atys
ENSCLAG00000006153	SMARCA5	98	99.278	ENSCSAG00000003448	SMARCA5	100	99.278	Chlorocebus_sabaeus
ENSCLAG00000006153	SMARCA5	91	100.000	ENSCHOG00000011724	SMARCA5	86	100.000	Choloepus_hoffmanni
ENSCLAG00000006153	SMARCA5	100	98.290	ENSCPBG00000027535	SMARCA5	96	98.290	Chrysemys_picta_bellii
ENSCLAG00000006153	SMARCA5	100	99.295	ENSCANG00000041629	SMARCA5	95	98.898	Colobus_angolensis_palliatus
ENSCLAG00000006153	SMARCA5	100	99.799	ENSCGRG00001012719	Smarca5	94	99.799	Cricetulus_griseus_chok1gshd
ENSCLAG00000006153	SMARCA5	100	99.799	ENSCGRG00000001417	Smarca5	99	99.698	Cricetulus_griseus_crigri
ENSCLAG00000006153	SMARCA5	100	96.576	ENSDNOG00000009158	SMARCA5	95	96.382	Dasypus_novemcinctus
ENSCLAG00000006153	SMARCA5	95	90.823	ENSDORG00000003466	Smarca5	97	90.823	Dipodomys_ordii
ENSCLAG00000006153	SMARCA5	97	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSCLAG00000006153	SMARCA5	100	99.496	ENSEASG00005001866	SMARCA5	98	99.636	Equus_asinus_asinus
ENSCLAG00000006153	SMARCA5	100	99.496	ENSECAG00000002676	SMARCA5	99	95.402	Equus_caballus
ENSCLAG00000006153	SMARCA5	100	95.166	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSCLAG00000006153	SMARCA5	97	89.175	ENSELUG00000014653	SMARCA5	99	89.175	Esox_lucius
ENSCLAG00000006153	SMARCA5	100	99.496	ENSFCAG00000004544	SMARCA5	96	98.121	Felis_catus
ENSCLAG00000006153	SMARCA5	98	97.113	ENSFALG00000004987	SMARCA5	100	97.113	Ficedula_albicollis
ENSCLAG00000006153	SMARCA5	100	99.799	ENSFDAG00000021016	SMARCA5	100	99.799	Fukomys_damarensis
ENSCLAG00000006153	SMARCA5	98	89.253	ENSGMOG00000007519	SMARCA5	94	89.253	Gadus_morhua
ENSCLAG00000006153	SMARCA5	100	97.384	ENSGALG00000009913	SMARCA5	96	97.384	Gallus_gallus
ENSCLAG00000006153	SMARCA5	98	90.583	ENSGACG00000017238	SMARCA5	95	90.583	Gasterosteus_aculeatus
ENSCLAG00000006153	SMARCA5	100	98.189	ENSGAGG00000019882	SMARCA5	96	98.189	Gopherus_agassizii
ENSCLAG00000006153	SMARCA5	100	99.194	ENSGGOG00000012595	SMARCA5	99	99.194	Gorilla_gorilla
ENSCLAG00000006153	SMARCA5	100	99.698	ENSHGLG00000000816	-	94	99.698	Heterocephalus_glaber_female
ENSCLAG00000006153	SMARCA5	100	90.030	ENSHGLG00000000317	-	95	90.030	Heterocephalus_glaber_female
ENSCLAG00000006153	SMARCA5	100	99.698	ENSHGLG00100018421	-	100	99.698	Heterocephalus_glaber_male
ENSCLAG00000006153	SMARCA5	100	99.597	ENSSTOG00000010683	SMARCA5	96	98.121	Ictidomys_tridecemlineatus
ENSCLAG00000006153	SMARCA5	100	99.496	ENSJJAG00000014965	Smarca5	95	99.496	Jaculus_jaculus
ENSCLAG00000006153	SMARCA5	99	95.358	ENSLACG00000007091	SMARCA5	97	95.358	Latimeria_chalumnae
ENSCLAG00000006153	SMARCA5	99	92.081	ENSLOCG00000008966	SMARCA5	96	92.081	Lepisosteus_oculatus
ENSCLAG00000006153	SMARCA5	100	99.496	ENSLAFG00000007795	SMARCA5	99	95.498	Loxodonta_africana
ENSCLAG00000006153	SMARCA5	100	99.295	ENSMFAG00000043649	SMARCA5	99	95.211	Macaca_fascicularis
ENSCLAG00000006153	SMARCA5	100	99.295	ENSMMUG00000000829	SMARCA5	97	99.262	Macaca_mulatta
ENSCLAG00000006153	SMARCA5	100	99.295	ENSMNEG00000031916	SMARCA5	99	95.211	Macaca_nemestrina
ENSCLAG00000006153	SMARCA5	100	99.295	ENSMLEG00000042393	SMARCA5	99	95.211	Mandrillus_leucophaeus
ENSCLAG00000006153	SMARCA5	100	97.384	ENSMGAG00000003517	SMARCA5	99	97.384	Meleagris_gallopavo
ENSCLAG00000006153	SMARCA5	100	99.799	ENSMAUG00000015902	Smarca5	98	99.799	Mesocricetus_auratus
ENSCLAG00000006153	SMARCA5	100	99.295	ENSMICG00000003971	SMARCA5	99	97.798	Microcebus_murinus
ENSCLAG00000006153	SMARCA5	100	99.396	ENSMOCG00000016986	-	97	97.154	Microtus_ochrogaster
ENSCLAG00000006153	SMARCA5	100	98.892	ENSMODG00000000391	SMARCA5	95	98.892	Monodelphis_domestica
ENSCLAG00000006153	SMARCA5	100	99.496	ENSMUSG00000031715	Smarca5	96	97.830	Mus_musculus
ENSCLAG00000006153	SMARCA5	100	99.698	MGP_PahariEiJ_G0022862	Smarca5	96	98.028	Mus_pahari
ENSCLAG00000006153	SMARCA5	100	99.597	ENSMLUG00000000468	SMARCA5	96	98.121	Myotis_lucifugus
ENSCLAG00000006153	SMARCA5	100	99.698	ENSNGAG00000000441	Smarca5	97	97.453	Nannospalax_galili
ENSCLAG00000006153	SMARCA5	100	99.295	ENSNLEG00000005383	SMARCA5	99	95.211	Nomascus_leucogenys
ENSCLAG00000006153	SMARCA5	97	91.116	ENSMEUG00000001267	SMARCA5	100	91.116	Notamacropus_eugenii
ENSCLAG00000006153	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSCLAG00000006153	SMARCA5	98	98.968	ENSOANG00000013921	SMARCA5	100	98.968	Ornithorhynchus_anatinus
ENSCLAG00000006153	SMARCA5	98	99.690	ENSOCUG00000013042	SMARCA5	100	99.690	Oryctolagus_cuniculus
ENSCLAG00000006153	SMARCA5	100	99.295	ENSOGAG00000009702	SMARCA5	97	96.875	Otolemur_garnettii
ENSCLAG00000006153	SMARCA5	99	99.194	ENSOARG00000010589	SMARCA5	94	99.194	Ovis_aries
ENSCLAG00000006153	SMARCA5	100	99.094	ENSPPAG00000028523	SMARCA5	99	99.094	Pan_paniscus
ENSCLAG00000006153	SMARCA5	100	93.555	ENSPPRG00000004925	SMARCA5	94	94.461	Panthera_pardus
ENSCLAG00000006153	SMARCA5	100	99.496	ENSPTIG00000020959	SMARCA5	97	98.121	Panthera_tigris_altaica
ENSCLAG00000006153	SMARCA5	100	99.194	ENSPTRG00000016472	SMARCA5	99	99.194	Pan_troglodytes
ENSCLAG00000006153	SMARCA5	100	99.295	ENSPANG00000001175	SMARCA5	99	95.211	Papio_anubis
ENSCLAG00000006153	SMARCA5	98	90.779	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSCLAG00000006153	SMARCA5	98	91.237	ENSPKIG00000015885	SMARCA5	100	91.237	Paramormyrops_kingsleyae
ENSCLAG00000006153	SMARCA5	100	95.875	ENSPSIG00000004177	SMARCA5	99	95.875	Pelodiscus_sinensis
ENSCLAG00000006153	SMARCA5	97	89.712	ENSPMGG00000012316	SMARCA5	100	89.712	Periophthalmus_magnuspinnatus
ENSCLAG00000006153	SMARCA5	100	99.799	ENSPEMG00000008060	Smarca5	98	99.799	Peromyscus_maniculatus_bairdii
ENSCLAG00000006153	SMARCA5	64	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSCLAG00000006153	SMARCA5	99	70.582	ENSPMAG00000006011	SMARCA5	81	85.600	Petromyzon_marinus
ENSCLAG00000006153	SMARCA5	100	98.892	ENSPCIG00000003926	SMARCA5	95	98.892	Phascolarctos_cinereus
ENSCLAG00000006153	SMARCA5	100	99.295	ENSPPYG00000015091	SMARCA5	99	95.211	Pongo_abelii
ENSCLAG00000006153	SMARCA5	84	95.333	ENSPCAG00000014230	SMARCA5	83	95.333	Procavia_capensis
ENSCLAG00000006153	SMARCA5	100	96.375	ENSPCOG00000026744	SMARCA5	99	95.775	Propithecus_coquereli
ENSCLAG00000006153	SMARCA5	100	99.396	ENSPVAG00000006482	SMARCA5	99	95.398	Pteropus_vampyrus
ENSCLAG00000006153	SMARCA5	99	89.909	ENSPNAG00000027824	SMARCA5	97	90.145	Pygocentrus_nattereri
ENSCLAG00000006153	SMARCA5	100	99.597	ENSRNOG00000018149	Smarca5	100	99.397	Rattus_norvegicus
ENSCLAG00000006153	SMARCA5	100	99.295	ENSRBIG00000044644	SMARCA5	94	99.295	Rhinopithecus_bieti
ENSCLAG00000006153	SMARCA5	100	99.295	ENSRROG00000029591	SMARCA5	99	99.295	Rhinopithecus_roxellana
ENSCLAG00000006153	SMARCA5	100	99.295	ENSSBOG00000036257	SMARCA5	99	95.211	Saimiri_boliviensis_boliviensis
ENSCLAG00000006153	SMARCA5	100	98.892	ENSSHAG00000008464	SMARCA5	100	98.892	Sarcophilus_harrisii
ENSCLAG00000006153	SMARCA5	99	90.578	ENSSFOG00015013252	SMARCA5	96	90.578	Scleropages_formosus
ENSCLAG00000006153	SMARCA5	99	96.364	ENSSPUG00000007604	SMARCA5	100	95.984	Sphenodon_punctatus
ENSCLAG00000006153	SMARCA5	100	99.496	ENSSSCG00000009047	SMARCA5	96	97.830	Sus_scrofa
ENSCLAG00000006153	SMARCA5	100	96.579	ENSTGUG00000002408	SMARCA5	99	96.579	Taeniopygia_guttata
ENSCLAG00000006153	SMARCA5	98	99.486	ENSUAMG00000023495	SMARCA5	93	99.486	Ursus_americanus
ENSCLAG00000006153	SMARCA5	100	99.496	ENSUMAG00000015324	SMARCA5	97	99.296	Ursus_maritimus
ENSCLAG00000006153	SMARCA5	100	99.194	ENSVPAG00000008982	SMARCA5	96	97.725	Vicugna_pacos
ENSCLAG00000006153	SMARCA5	100	99.496	ENSVVUG00000017473	SMARCA5	96	98.121	Vulpes_vulpes
ENSCLAG00000006153	SMARCA5	94	93.717	ENSXETG00000017566	smarca5	95	92.835	Xenopus_tropicalis