EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000006281 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 1953 bases
Position: chrJH721881.1:2200421-2202373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000008993	Arg_tRNA_synt_N	PF03485.16	4.1e-22	1	1
ENSCLAP00000008993	tRNA-synt_1d	PF00750.19	8.3e-100	1	2
ENSCLAP00000008993	tRNA-synt_1d	PF00750.19	8.3e-100	2	2
ENSCLAP00000008993	DALR_1	PF05746.15	7.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009121	-	1728	-	ENSCLAP00000008993	575 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000006281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000006281	-	98	80.691	ENSCLAG00000013061	-	97	80.691

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006281	-	98	74.411	ENSG00000113643	RARS	97	74.411	Homo_sapiens
ENSCLAG00000006281	-	98	63.422	ENSAPOG00000005162	rars	97	63.422	Acanthochromis_polyacanthus
ENSCLAG00000006281	-	98	74.254	ENSAMEG00000007025	RARS	97	74.254	Ailuropoda_melanoleuca
ENSCLAG00000006281	-	87	63.368	ENSACIG00000019199	rars	98	63.368	Amphilophus_citrinellus
ENSCLAG00000006281	-	98	63.265	ENSAOCG00000005604	rars	97	63.265	Amphiprion_ocellaris
ENSCLAG00000006281	-	98	63.108	ENSAPEG00000006465	rars	97	63.108	Amphiprion_percula
ENSCLAG00000006281	-	98	62.480	ENSATEG00000014025	rars	97	62.480	Anabas_testudineus
ENSCLAG00000006281	-	98	66.771	ENSAPLG00000002426	RARS	97	66.771	Anas_platyrhynchos
ENSCLAG00000006281	-	97	68.289	ENSACAG00000004938	RARS	96	68.289	Anolis_carolinensis
ENSCLAG00000006281	-	98	74.097	ENSANAG00000037068	RARS	97	74.097	Aotus_nancymaae
ENSCLAG00000006281	-	98	61.442	ENSACLG00000025166	rars	97	61.442	Astatotilapia_calliptera
ENSCLAG00000006281	-	98	59.184	ENSAMXG00000017290	rars	96	59.184	Astyanax_mexicanus
ENSCLAG00000006281	-	98	73.783	ENSBTAG00000014626	RARS	97	73.783	Bos_taurus
ENSCLAG00000006281	-	85	43.158	WBGene00004679	rars-1	80	43.158	Caenorhabditis_elegans
ENSCLAG00000006281	-	98	74.568	ENSCJAG00000015491	RARS	97	74.568	Callithrix_jacchus
ENSCLAG00000006281	-	98	73.940	ENSCAFG00000017058	RARS	97	73.940	Canis_familiaris
ENSCLAG00000006281	-	53	68.000	ENSCAFG00020003506	RARS	84	68.000	Canis_lupus_dingo
ENSCLAG00000006281	-	98	74.097	ENSCHIG00000021126	RARS	97	74.097	Capra_hircus
ENSCLAG00000006281	-	98	75.824	ENSTSYG00000011635	RARS	97	75.824	Carlito_syrichta
ENSCLAG00000006281	-	79	83.077	ENSCAPG00000007597	RARS	95	83.417	Cavia_aperea
ENSCLAG00000006281	-	98	77.237	ENSCPOG00000007379	RARS	97	77.237	Cavia_porcellus
ENSCLAG00000006281	-	98	74.882	ENSCCAG00000027227	RARS	97	74.882	Cebus_capucinus
ENSCLAG00000006281	-	98	74.411	ENSCATG00000025045	RARS	88	84.211	Cercocebus_atys
ENSCLAG00000006281	-	98	74.568	ENSCSAG00000010165	RARS	97	74.568	Chlorocebus_sabaeus
ENSCLAG00000006281	-	56	92.500	ENSCHOG00000007747	-	57	92.500	Choloepus_hoffmanni
ENSCLAG00000006281	-	97	64.724	ENSCPBG00000008379	RARS	98	67.608	Chrysemys_picta_bellii
ENSCLAG00000006281	-	97	48.686	ENSCING00000007294	-	96	48.686	Ciona_intestinalis
ENSCLAG00000006281	-	86	49.301	ENSCSAVG00000008559	-	98	49.301	Ciona_savignyi
ENSCLAG00000006281	-	98	74.725	ENSCANG00000043212	RARS	88	84.211	Colobus_angolensis_palliatus
ENSCLAG00000006281	-	98	72.884	ENSCGRG00001002920	RARS	97	72.884	Cricetulus_griseus_chok1gshd
ENSCLAG00000006281	-	98	72.144	ENSCGRG00000013308	Rars	98	72.144	Cricetulus_griseus_crigri
ENSCLAG00000006281	-	96	60.506	ENSCSEG00000020512	rars	92	60.436	Cynoglossus_semilaevis
ENSCLAG00000006281	-	98	62.480	ENSCVAG00000020217	rars	97	62.480	Cyprinodon_variegatus
ENSCLAG00000006281	-	98	63.323	ENSDARG00000054530	rars	95	66.923	Danio_rerio
ENSCLAG00000006281	-	72	30.061	ENSDARG00000032277	rars2	75	30.061	Danio_rerio
ENSCLAG00000006281	-	63	72.048	ENSDNOG00000015032	RARS	95	72.048	Dasypus_novemcinctus
ENSCLAG00000006281	-	97	59.779	ENSDORG00000010641	Rars	97	59.779	Dipodomys_ordii
ENSCLAG00000006281	-	97	47.981	FBgn0027093	ArgRS	96	47.981	Drosophila_melanogaster
ENSCLAG00000006281	-	85	79.592	ENSETEG00000015148	RARS	86	79.592	Echinops_telfairi
ENSCLAG00000006281	-	97	52.574	ENSEBUG00000011116	rars	97	53.554	Eptatretus_burgeri
ENSCLAG00000006281	-	98	75.510	ENSEASG00005012782	RARS	97	75.510	Equus_asinus_asinus
ENSCLAG00000006281	-	98	75.510	ENSECAG00000024383	RARS	97	75.510	Equus_caballus
ENSCLAG00000006281	-	85	67.361	ENSEEUG00000009388	-	87	67.361	Erinaceus_europaeus
ENSCLAG00000006281	-	97	61.950	ENSELUG00000011052	rars	96	61.950	Esox_lucius
ENSCLAG00000006281	-	98	74.725	ENSFCAG00000022422	RARS	97	74.725	Felis_catus
ENSCLAG00000006281	-	87	67.703	ENSFALG00000009700	RARS	98	67.703	Ficedula_albicollis
ENSCLAG00000006281	-	98	77.551	ENSFDAG00000004373	RARS	97	77.551	Fukomys_damarensis
ENSCLAG00000006281	-	98	61.068	ENSFHEG00000000411	rars	97	61.068	Fundulus_heteroclitus
ENSCLAG00000006281	-	98	54.945	ENSGMOG00000014779	rars	96	54.945	Gadus_morhua
ENSCLAG00000006281	-	97	67.087	ENSGALG00000001850	RARS	97	66.928	Gallus_gallus
ENSCLAG00000006281	-	97	62.421	ENSGAFG00000011519	rars	96	62.421	Gambusia_affinis
ENSCLAG00000006281	-	97	57.656	ENSGACG00000020813	rars	98	58.317	Gasterosteus_aculeatus
ENSCLAG00000006281	-	98	68.809	ENSGAGG00000013126	RARS	97	68.809	Gopherus_agassizii
ENSCLAG00000006281	-	98	74.411	ENSGGOG00000009650	RARS	97	74.411	Gorilla_gorilla
ENSCLAG00000006281	-	98	61.442	ENSHBUG00000013622	rars	97	61.442	Haplochromis_burtoni
ENSCLAG00000006281	-	98	77.865	ENSHGLG00000013073	RARS	97	77.865	Heterocephalus_glaber_female
ENSCLAG00000006281	-	98	77.865	ENSHGLG00100012450	RARS	97	77.865	Heterocephalus_glaber_male
ENSCLAG00000006281	-	94	59.935	ENSHCOG00000020064	rars	95	59.935	Hippocampus_comes
ENSCLAG00000006281	-	98	60.126	ENSIPUG00000006210	rars	97	60.126	Ictalurus_punctatus
ENSCLAG00000006281	-	90	67.668	ENSSTOG00000001441	RARS	94	67.496	Ictidomys_tridecemlineatus
ENSCLAG00000006281	-	98	73.940	ENSJJAG00000020235	Rars	97	73.940	Jaculus_jaculus
ENSCLAG00000006281	-	98	61.852	ENSKMAG00000003759	rars	97	61.852	Kryptolebias_marmoratus
ENSCLAG00000006281	-	98	62.096	ENSLBEG00000021321	rars	98	62.096	Labrus_bergylta
ENSCLAG00000006281	-	98	65.674	ENSLACG00000015877	RARS	97	65.674	Latimeria_chalumnae
ENSCLAG00000006281	-	97	64.252	ENSLOCG00000012373	rars	96	64.252	Lepisosteus_oculatus
ENSCLAG00000006281	-	98	74.254	ENSLAFG00000003877	RARS	97	74.254	Loxodonta_africana
ENSCLAG00000006281	-	98	74.411	ENSMFAG00000030272	RARS	88	84.211	Macaca_fascicularis
ENSCLAG00000006281	-	98	74.411	ENSMMUG00000012516	RARS	97	74.411	Macaca_mulatta
ENSCLAG00000006281	-	65	64.103	ENSMNEG00000044708	RARS	97	64.103	Macaca_nemestrina
ENSCLAG00000006281	-	98	74.568	ENSMLEG00000035328	RARS	88	84.211	Mandrillus_leucophaeus
ENSCLAG00000006281	-	98	63.108	ENSMAMG00000021860	rars	97	63.108	Mastacembelus_armatus
ENSCLAG00000006281	-	98	61.442	ENSMZEG00005012060	rars	97	61.442	Maylandia_zebra
ENSCLAG00000006281	-	97	66.667	ENSMGAG00000002320	RARS	96	66.667	Meleagris_gallopavo
ENSCLAG00000006281	-	98	68.464	ENSMAUG00000008565	Rars	98	68.464	Mesocricetus_auratus
ENSCLAG00000006281	-	90	69.178	ENSMICG00000004771	-	96	69.178	Microcebus_murinus
ENSCLAG00000006281	-	59	58.311	ENSMICG00000034055	-	100	58.311	Microcebus_murinus
ENSCLAG00000006281	-	98	72.571	ENSMOCG00000005240	Rars	97	72.571	Microtus_ochrogaster
ENSCLAG00000006281	-	97	62.401	ENSMMOG00000016040	rars	98	62.401	Mola_mola
ENSCLAG00000006281	-	98	70.016	ENSMODG00000007321	-	98	70.433	Monodelphis_domestica
ENSCLAG00000006281	-	98	62.794	ENSMALG00000021344	rars	97	62.794	Monopterus_albus
ENSCLAG00000006281	-	98	73.940	ENSMUSG00000018848	Rars	97	73.940	Mus_musculus
ENSCLAG00000006281	-	98	74.254	MGP_PahariEiJ_G0017344	Rars	97	74.254	Mus_pahari
ENSCLAG00000006281	-	98	73.783	MGP_SPRETEiJ_G0017049	Rars	97	73.783	Mus_spretus
ENSCLAG00000006281	-	98	75.039	ENSMPUG00000013050	RARS	97	75.039	Mustela_putorius_furo
ENSCLAG00000006281	-	98	74.097	ENSMLUG00000011839	RARS	97	74.097	Myotis_lucifugus
ENSCLAG00000006281	-	98	73.783	ENSNGAG00000000816	Rars	97	73.783	Nannospalax_galili
ENSCLAG00000006281	-	98	73.626	ENSNLEG00000004848	RARS	97	73.626	Nomascus_leucogenys
ENSCLAG00000006281	-	83	73.094	ENSMEUG00000012548	RARS	78	73.094	Notamacropus_eugenii
ENSCLAG00000006281	-	98	78.336	ENSODEG00000005980	RARS	97	78.336	Octodon_degus
ENSCLAG00000006281	-	98	62.226	ENSONIG00000016429	rars	97	62.226	Oreochromis_niloticus
ENSCLAG00000006281	-	98	70.690	ENSOANG00000007814	RARS	97	70.690	Ornithorhynchus_anatinus
ENSCLAG00000006281	-	98	74.725	ENSOCUG00000015698	RARS	97	74.725	Oryctolagus_cuniculus
ENSCLAG00000006281	-	97	61.635	ENSOMEG00000023715	rars	86	61.635	Oryzias_melastigma
ENSCLAG00000006281	-	98	73.469	ENSOGAG00000006369	RARS	97	73.469	Otolemur_garnettii
ENSCLAG00000006281	-	98	69.702	ENSOARG00000014557	RARS	97	69.702	Ovis_aries
ENSCLAG00000006281	-	98	74.411	ENSPPAG00000043505	RARS	97	74.411	Pan_paniscus
ENSCLAG00000006281	-	98	74.882	ENSPPRG00000009833	RARS	97	74.882	Panthera_pardus
ENSCLAG00000006281	-	98	74.882	ENSPTIG00000015946	RARS	97	74.882	Panthera_tigris_altaica
ENSCLAG00000006281	-	98	73.376	ENSPTRG00000017507	RARS	88	81.579	Pan_troglodytes
ENSCLAG00000006281	-	98	74.254	ENSPANG00000012015	RARS	88	84.211	Papio_anubis
ENSCLAG00000006281	-	97	62.677	ENSPKIG00000009639	rars	96	62.677	Paramormyrops_kingsleyae
ENSCLAG00000006281	-	97	68.082	ENSPSIG00000014393	RARS	96	68.082	Pelodiscus_sinensis
ENSCLAG00000006281	-	87	64.410	ENSPMGG00000003437	rars	98	64.410	Periophthalmus_magnuspinnatus
ENSCLAG00000006281	-	98	72.884	ENSPEMG00000020288	Rars	97	72.884	Peromyscus_maniculatus_bairdii
ENSCLAG00000006281	-	98	70.690	ENSPCIG00000029479	RARS	97	70.690	Phascolarctos_cinereus
ENSCLAG00000006281	-	97	62.128	ENSPFOG00000010658	rars	96	62.128	Poecilia_formosa
ENSCLAG00000006281	-	95	61.958	ENSPLAG00000022374	rars	98	63.826	Poecilia_latipinna
ENSCLAG00000006281	-	97	62.421	ENSPMEG00000023877	rars	90	62.421	Poecilia_mexicana
ENSCLAG00000006281	-	97	62.107	ENSPREG00000013003	rars	86	62.107	Poecilia_reticulata
ENSCLAG00000006281	-	98	73.940	ENSPPYG00000016023	RARS	97	73.940	Pongo_abelii
ENSCLAG00000006281	-	93	73.892	ENSPCAG00000009628	RARS	100	73.892	Procavia_capensis
ENSCLAG00000006281	-	98	73.783	ENSPCOG00000017183	RARS	97	73.783	Propithecus_coquereli
ENSCLAG00000006281	-	90	83.270	ENSPVAG00000005760	RARS	85	83.270	Pteropus_vampyrus
ENSCLAG00000006281	-	98	63.009	ENSPNAG00000018183	rars	97	63.009	Pygocentrus_nattereri
ENSCLAG00000006281	-	98	75.039	ENSRNOG00000007739	Rars	97	75.039	Rattus_norvegicus
ENSCLAG00000006281	-	98	74.843	ENSRBIG00000029571	RARS	88	84.211	Rhinopithecus_bieti
ENSCLAG00000006281	-	98	74.725	ENSRROG00000045496	RARS	88	84.211	Rhinopithecus_roxellana
ENSCLAG00000006281	-	98	74.882	ENSSBOG00000020783	RARS	97	74.882	Saimiri_boliviensis_boliviensis
ENSCLAG00000006281	-	98	71.003	ENSSHAG00000015413	RARS	97	71.003	Sarcophilus_harrisii
ENSCLAG00000006281	-	97	62.162	ENSSFOG00015010622	rars	96	62.162	Scleropages_formosus
ENSCLAG00000006281	-	98	62.637	ENSSMAG00000013772	rars	97	62.637	Scophthalmus_maximus
ENSCLAG00000006281	-	98	64.207	ENSSDUG00000022397	rars	97	64.207	Seriola_dumerili
ENSCLAG00000006281	-	98	63.736	ENSSLDG00000025124	rars	97	63.665	Seriola_lalandi_dorsalis
ENSCLAG00000006281	-	74	82.787	ENSSARG00000003809	RARS	83	82.787	Sorex_araneus
ENSCLAG00000006281	-	99	66.358	ENSSPUG00000007371	RARS	98	66.358	Sphenodon_punctatus
ENSCLAG00000006281	-	98	63.265	ENSSPAG00000011834	rars	97	63.265	Stegastes_partitus
ENSCLAG00000006281	-	98	74.254	ENSSSCG00000017015	RARS	97	74.254	Sus_scrofa
ENSCLAG00000006281	-	93	67.537	ENSTGUG00000001499	RARS	100	67.537	Taeniopygia_guttata
ENSCLAG00000006281	-	97	60.849	ENSTRUG00000000601	rars	96	60.849	Takifugu_rubripes
ENSCLAG00000006281	-	97	61.478	ENSTNIG00000007619	rars	96	61.478	Tetraodon_nigroviridis
ENSCLAG00000006281	-	74	70.342	ENSTBEG00000016043	RARS	69	70.342	Tupaia_belangeri
ENSCLAG00000006281	-	98	73.940	ENSTTRG00000016151	RARS	97	73.940	Tursiops_truncatus
ENSCLAG00000006281	-	50	30.548	ENSUAMG00000028068	RARS2	74	30.548	Ursus_americanus
ENSCLAG00000006281	-	98	74.097	ENSUAMG00000023307	RARS	97	74.097	Ursus_americanus
ENSCLAG00000006281	-	98	74.254	ENSUMAG00000024723	RARS	97	74.254	Ursus_maritimus
ENSCLAG00000006281	-	73	82.510	ENSVPAG00000006496	RARS	67	82.510	Vicugna_pacos
ENSCLAG00000006281	-	98	73.783	ENSVVUG00000003095	RARS	97	73.855	Vulpes_vulpes
ENSCLAG00000006281	-	53	30.278	ENSVVUG00000009876	RARS2	74	30.278	Vulpes_vulpes
ENSCLAG00000006281	-	98	64.050	ENSXETG00000025551	rars	97	64.050	Xenopus_tropicalis
ENSCLAG00000006281	-	87	63.304	ENSXCOG00000018823	rars	98	63.304	Xiphophorus_couchianus
ENSCLAG00000006281	-	97	62.107	ENSXMAG00000015595	rars	96	62.107	Xiphophorus_maculatus