EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000006289 (Gene tree)
Gene ID: 102014389
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 88755 bases
Position: chrJH721893.1:15938791-16027545
Accession: 102014389
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000009004	Not1	PF04054.15	8.8e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009132	CNOT1-201	7842	XM_005388446	ENSCLAP00000009004	2376 (aa)	XP_005388503	UPI00038EBC8C

Gene Model

Click here to download ENSCLAG00000006289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006289	CNOT1	100	99.663	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSCLAG00000006289	CNOT1	97	97.055	ENSAPOG00000005042	cnot1	100	97.055	Acanthochromis_polyacanthus
ENSCLAG00000006289	CNOT1	100	99.495	ENSAMEG00000017298	CNOT1	100	99.495	Ailuropoda_melanoleuca
ENSCLAG00000006289	CNOT1	90	89.935	ENSACIG00000016003	cnot1	100	90.261	Amphilophus_citrinellus
ENSCLAG00000006289	CNOT1	100	90.554	ENSAPEG00000022342	cnot1	100	90.512	Amphiprion_percula
ENSCLAG00000006289	CNOT1	97	97.195	ENSATEG00000012892	cnot1	100	97.195	Anabas_testudineus
ENSCLAG00000006289	CNOT1	100	97.689	ENSAPLG00000007162	CNOT1	100	97.689	Anas_platyrhynchos
ENSCLAG00000006289	CNOT1	91	96.197	ENSACAG00000001602	CNOT1	98	96.150	Anolis_carolinensis
ENSCLAG00000006289	CNOT1	100	96.774	ENSANAG00000038198	CNOT1	100	96.774	Aotus_nancymaae
ENSCLAG00000006289	CNOT1	97	97.195	ENSACLG00000014234	cnot1	100	97.195	Astatotilapia_calliptera
ENSCLAG00000006289	CNOT1	100	90.997	ENSAMXG00000013170	cnot1	100	91.505	Astyanax_mexicanus
ENSCLAG00000006289	CNOT1	100	99.832	ENSBTAG00000020782	CNOT1	100	99.832	Bos_taurus
ENSCLAG00000006289	CNOT1	81	40.440	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSCLAG00000006289	CNOT1	100	99.621	ENSCJAG00000011318	CNOT1	100	99.621	Callithrix_jacchus
ENSCLAG00000006289	CNOT1	100	99.412	ENSCAFG00000008426	CNOT1	100	99.412	Canis_familiaris
ENSCLAG00000006289	CNOT1	100	98.658	ENSCAFG00020010156	CNOT1	100	99.373	Canis_lupus_dingo
ENSCLAG00000006289	CNOT1	100	99.832	ENSCHIG00000010452	CNOT1	100	99.832	Capra_hircus
ENSCLAG00000006289	CNOT1	100	99.790	ENSTSYG00000006888	CNOT1	100	99.790	Carlito_syrichta
ENSCLAG00000006289	CNOT1	100	95.286	ENSCPOG00000013026	CNOT1	100	95.286	Cavia_porcellus
ENSCLAG00000006289	CNOT1	100	98.064	ENSCCAG00000026333	CNOT1	100	98.064	Cebus_capucinus
ENSCLAG00000006289	CNOT1	100	99.705	ENSCATG00000032625	CNOT1	100	99.705	Cercocebus_atys
ENSCLAG00000006289	CNOT1	100	99.705	ENSCSAG00000004731	CNOT1	100	99.705	Chlorocebus_sabaeus
ENSCLAG00000006289	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSCLAG00000006289	CNOT1	95	98.472	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSCLAG00000006289	CNOT1	100	59.119	ENSCING00000009149	-	100	58.946	Ciona_intestinalis
ENSCLAG00000006289	CNOT1	89	63.067	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSCLAG00000006289	CNOT1	100	97.576	ENSCANG00000040534	CNOT1	100	97.576	Colobus_angolensis_palliatus
ENSCLAG00000006289	CNOT1	100	99.495	ENSCGRG00001016365	Cnot1	100	99.495	Cricetulus_griseus_chok1gshd
ENSCLAG00000006289	CNOT1	100	99.495	ENSCGRG00000001714	Cnot1	100	99.495	Cricetulus_griseus_crigri
ENSCLAG00000006289	CNOT1	97	96.494	ENSCVAG00000018930	cnot1	100	96.494	Cyprinodon_variegatus
ENSCLAG00000006289	CNOT1	100	89.941	ENSDARG00000004174	cnot1	100	89.858	Danio_rerio
ENSCLAG00000006289	CNOT1	100	97.181	ENSDNOG00000013250	CNOT1	100	97.181	Dasypus_novemcinctus
ENSCLAG00000006289	CNOT1	99	46.230	FBgn0085436	Not1	99	48.431	Drosophila_melanogaster
ENSCLAG00000006289	CNOT1	84	97.440	ENSETEG00000012806	CNOT1	84	97.440	Echinops_telfairi
ENSCLAG00000006289	CNOT1	81	76.831	ENSEBUG00000011534	cnot1	95	76.831	Eptatretus_burgeri
ENSCLAG00000006289	CNOT1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSCLAG00000006289	CNOT1	100	99.790	ENSECAG00000009889	CNOT1	100	99.790	Equus_caballus
ENSCLAG00000006289	CNOT1	90	99.373	ENSEEUG00000006015	CNOT1	90	99.373	Erinaceus_europaeus
ENSCLAG00000006289	CNOT1	100	89.818	ENSELUG00000014085	cnot1	100	89.500	Esox_lucius
ENSCLAG00000006289	CNOT1	100	99.496	ENSFCAG00000025155	CNOT1	100	99.496	Felis_catus
ENSCLAG00000006289	CNOT1	100	97.727	ENSFALG00000007285	CNOT1	100	97.727	Ficedula_albicollis
ENSCLAG00000006289	CNOT1	100	99.916	ENSFDAG00000013399	CNOT1	100	99.916	Fukomys_damarensis
ENSCLAG00000006289	CNOT1	100	90.340	ENSFHEG00000020574	cnot1	100	90.340	Fundulus_heteroclitus
ENSCLAG00000006289	CNOT1	91	89.403	ENSGMOG00000012864	cnot1	100	89.773	Gadus_morhua
ENSCLAG00000006289	CNOT1	100	97.769	ENSGALG00000002301	CNOT1	100	97.769	Gallus_gallus
ENSCLAG00000006289	CNOT1	100	89.253	ENSGAFG00000015005	cnot1	100	89.211	Gambusia_affinis
ENSCLAG00000006289	CNOT1	91	90.194	ENSGACG00000002606	cnot1	100	95.874	Gasterosteus_aculeatus
ENSCLAG00000006289	CNOT1	100	97.812	ENSGAGG00000022646	CNOT1	100	97.812	Gopherus_agassizii
ENSCLAG00000006289	CNOT1	100	99.621	ENSGGOG00000009547	CNOT1	100	99.621	Gorilla_gorilla
ENSCLAG00000006289	CNOT1	97	97.195	ENSHBUG00000001729	cnot1	100	97.195	Haplochromis_burtoni
ENSCLAG00000006289	CNOT1	100	99.832	ENSHGLG00000014322	CNOT1	100	99.832	Heterocephalus_glaber_female
ENSCLAG00000006289	CNOT1	100	89.465	ENSHCOG00000006501	cnot1	100	89.562	Hippocampus_comes
ENSCLAG00000006289	CNOT1	100	88.884	ENSIPUG00000011915	cnot1	100	89.346	Ictalurus_punctatus
ENSCLAG00000006289	CNOT1	100	99.832	ENSSTOG00000005490	CNOT1	100	99.832	Ictidomys_tridecemlineatus
ENSCLAG00000006289	CNOT1	100	99.158	ENSJJAG00000000633	Cnot1	100	99.158	Jaculus_jaculus
ENSCLAG00000006289	CNOT1	100	90.255	ENSKMAG00000006149	cnot1	100	90.134	Kryptolebias_marmoratus
ENSCLAG00000006289	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSCLAG00000006289	CNOT1	100	95.076	ENSLACG00000010869	CNOT1	100	95.076	Latimeria_chalumnae
ENSCLAG00000006289	CNOT1	100	93.037	ENSLOCG00000006324	cnot1	100	93.037	Lepisosteus_oculatus
ENSCLAG00000006289	CNOT1	100	99.537	ENSLAFG00000000098	CNOT1	100	99.537	Loxodonta_africana
ENSCLAG00000006289	CNOT1	100	99.453	ENSMFAG00000035888	CNOT1	100	99.453	Macaca_fascicularis
ENSCLAG00000006289	CNOT1	100	99.663	ENSMMUG00000014625	CNOT1	100	99.663	Macaca_mulatta
ENSCLAG00000006289	CNOT1	100	96.895	ENSMNEG00000031820	CNOT1	100	99.720	Macaca_nemestrina
ENSCLAG00000006289	CNOT1	100	98.274	ENSMLEG00000040933	CNOT1	100	98.274	Mandrillus_leucophaeus
ENSCLAG00000006289	CNOT1	100	89.257	ENSMAMG00000016524	cnot1	100	89.337	Mastacembelus_armatus
ENSCLAG00000006289	CNOT1	97	97.195	ENSMZEG00005016210	cnot1	100	97.195	Maylandia_zebra
ENSCLAG00000006289	CNOT1	100	97.517	ENSMGAG00000001908	CNOT1	100	97.517	Meleagris_gallopavo
ENSCLAG00000006289	CNOT1	100	99.579	ENSMICG00000007071	CNOT1	100	99.579	Microcebus_murinus
ENSCLAG00000006289	CNOT1	100	99.537	ENSMOCG00000017969	Cnot1	100	99.537	Microtus_ochrogaster
ENSCLAG00000006289	CNOT1	97	93.829	ENSMMOG00000019134	cnot1	100	93.829	Mola_mola
ENSCLAG00000006289	CNOT1	100	97.897	ENSMODG00000014199	CNOT1	100	97.897	Monodelphis_domestica
ENSCLAG00000006289	CNOT1	100	90.256	ENSMALG00000008645	cnot1	100	90.298	Monopterus_albus
ENSCLAG00000006289	CNOT1	95	99.777	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	Mus_caroli
ENSCLAG00000006289	CNOT1	100	99.579	ENSMUSG00000036550	Cnot1	100	99.579	Mus_musculus
ENSCLAG00000006289	CNOT1	100	99.621	MGP_PahariEiJ_G0023028	Cnot1	100	99.621	Mus_pahari
ENSCLAG00000006289	CNOT1	100	99.579	MGP_SPRETEiJ_G0032549	Cnot1	100	99.579	Mus_spretus
ENSCLAG00000006289	CNOT1	100	99.790	ENSMPUG00000004830	CNOT1	100	99.790	Mustela_putorius_furo
ENSCLAG00000006289	CNOT1	100	99.116	ENSMLUG00000003728	CNOT1	100	99.116	Myotis_lucifugus
ENSCLAG00000006289	CNOT1	100	99.790	ENSNGAG00000018628	Cnot1	100	99.790	Nannospalax_galili
ENSCLAG00000006289	CNOT1	94	97.195	ENSNBRG00000019358	cnot1	100	97.195	Neolamprologus_brichardi
ENSCLAG00000006289	CNOT1	100	99.579	ENSNLEG00000003566	CNOT1	100	99.579	Nomascus_leucogenys
ENSCLAG00000006289	CNOT1	86	98.434	ENSMEUG00000006145	CNOT1	87	98.434	Notamacropus_eugenii
ENSCLAG00000006289	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSCLAG00000006289	CNOT1	100	99.874	ENSODEG00000016337	CNOT1	100	99.874	Octodon_degus
ENSCLAG00000006289	CNOT1	100	90.620	ENSONIG00000007358	cnot1	100	90.213	Oreochromis_niloticus
ENSCLAG00000006289	CNOT1	91	97.954	ENSOANG00000012109	CNOT1	100	98.260	Ornithorhynchus_anatinus
ENSCLAG00000006289	CNOT1	100	99.705	ENSOCUG00000006911	CNOT1	100	99.705	Oryctolagus_cuniculus
ENSCLAG00000006289	CNOT1	100	90.356	ENSORLG00000013734	cnot1	100	90.394	Oryzias_latipes
ENSCLAG00000006289	CNOT1	100	88.870	ENSORLG00020017012	cnot1	100	88.549	Oryzias_latipes_hni
ENSCLAG00000006289	CNOT1	100	88.786	ENSORLG00015007091	cnot1	100	88.297	Oryzias_latipes_hsok
ENSCLAG00000006289	CNOT1	100	88.124	ENSOMEG00000015124	cnot1	100	88.413	Oryzias_melastigma
ENSCLAG00000006289	CNOT1	100	99.621	ENSOGAG00000000543	CNOT1	100	99.621	Otolemur_garnettii
ENSCLAG00000006289	CNOT1	100	99.832	ENSOARG00000001567	CNOT1	100	99.832	Ovis_aries
ENSCLAG00000006289	CNOT1	100	99.663	ENSPPAG00000022013	CNOT1	100	99.663	Pan_paniscus
ENSCLAG00000006289	CNOT1	100	99.790	ENSPPRG00000004867	CNOT1	100	99.790	Panthera_pardus
ENSCLAG00000006289	CNOT1	100	99.790	ENSPTIG00000012589	CNOT1	100	99.790	Panthera_tigris_altaica
ENSCLAG00000006289	CNOT1	100	99.371	ENSPTRG00000008183	CNOT1	100	99.371	Pan_troglodytes
ENSCLAG00000006289	CNOT1	100	96.228	ENSPANG00000020901	CNOT1	100	96.228	Papio_anubis
ENSCLAG00000006289	CNOT1	100	92.237	ENSPKIG00000023538	CNOT1	100	92.405	Paramormyrops_kingsleyae
ENSCLAG00000006289	CNOT1	97	93.399	ENSPKIG00000002914	CNOT1	99	93.399	Paramormyrops_kingsleyae
ENSCLAG00000006289	CNOT1	100	97.685	ENSPSIG00000005499	CNOT1	100	97.685	Pelodiscus_sinensis
ENSCLAG00000006289	CNOT1	100	81.166	ENSPMAG00000009381	cnot1	100	81.066	Petromyzon_marinus
ENSCLAG00000006289	CNOT1	100	96.871	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
ENSCLAG00000006289	CNOT1	99	89.852	ENSPFOG00000003497	cnot1	100	89.894	Poecilia_formosa
ENSCLAG00000006289	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSCLAG00000006289	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSCLAG00000006289	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSCLAG00000006289	CNOT1	100	99.621	ENSPPYG00000007410	CNOT1	100	99.621	Pongo_abelii
ENSCLAG00000006289	CNOT1	90	97.530	ENSPCAG00000003241	CNOT1	90	97.530	Procavia_capensis
ENSCLAG00000006289	CNOT1	100	99.329	ENSPCOG00000027139	CNOT1	100	99.329	Propithecus_coquereli
ENSCLAG00000006289	CNOT1	100	97.138	ENSPVAG00000004243	CNOT1	100	97.138	Pteropus_vampyrus
ENSCLAG00000006289	CNOT1	97	97.195	ENSPNYG00000012919	cnot1	100	97.195	Pundamilia_nyererei
ENSCLAG00000006289	CNOT1	100	89.903	ENSPNAG00000000246	cnot1	100	90.324	Pygocentrus_nattereri
ENSCLAG00000006289	CNOT1	100	99.579	ENSRNOG00000012271	Cnot1	100	99.579	Rattus_norvegicus
ENSCLAG00000006289	CNOT1	100	97.356	ENSRBIG00000044598	CNOT1	100	97.356	Rhinopithecus_bieti
ENSCLAG00000006289	CNOT1	100	99.705	ENSRROG00000000906	CNOT1	100	99.705	Rhinopithecus_roxellana
ENSCLAG00000006289	CNOT1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSCLAG00000006289	CNOT1	100	95.228	ENSSBOG00000029155	CNOT1	100	95.228	Saimiri_boliviensis_boliviensis
ENSCLAG00000006289	CNOT1	100	98.066	ENSSHAG00000012187	CNOT1	100	98.066	Sarcophilus_harrisii
ENSCLAG00000006289	CNOT1	100	90.566	ENSSFOG00015017614	cnot1	100	90.310	Scleropages_formosus
ENSCLAG00000006289	CNOT1	97	97.195	ENSSMAG00000013844	cnot1	100	97.195	Scophthalmus_maximus
ENSCLAG00000006289	CNOT1	97	97.055	ENSSDUG00000021491	cnot1	100	97.055	Seriola_dumerili
ENSCLAG00000006289	CNOT1	97	97.055	ENSSLDG00000014816	cnot1	100	97.055	Seriola_lalandi_dorsalis
ENSCLAG00000006289	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSCLAG00000006289	CNOT1	100	90.642	ENSSPAG00000018802	cnot1	100	90.432	Stegastes_partitus
ENSCLAG00000006289	CNOT1	100	99.621	ENSSSCG00000002799	CNOT1	100	99.621	Sus_scrofa
ENSCLAG00000006289	CNOT1	100	97.604	ENSTGUG00000005919	CNOT1	100	97.604	Taeniopygia_guttata
ENSCLAG00000006289	CNOT1	100	88.986	ENSTNIG00000018706	cnot1	100	88.833	Tetraodon_nigroviridis
ENSCLAG00000006289	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSCLAG00000006289	CNOT1	95	99.476	ENSTTRG00000008460	CNOT1	95	99.476	Tursiops_truncatus
ENSCLAG00000006289	CNOT1	100	99.790	ENSUAMG00000009251	CNOT1	100	99.790	Ursus_americanus
ENSCLAG00000006289	CNOT1	100	99.790	ENSUMAG00000021291	CNOT1	100	99.790	Ursus_maritimus
ENSCLAG00000006289	CNOT1	97	97.317	ENSVPAG00000008846	CNOT1	97	97.317	Vicugna_pacos
ENSCLAG00000006289	CNOT1	100	98.658	ENSVVUG00000024037	CNOT1	100	99.373	Vulpes_vulpes
ENSCLAG00000006289	CNOT1	100	90.344	ENSXETG00000015900	cnot1	100	90.134	Xenopus_tropicalis
ENSCLAG00000006289	CNOT1	100	89.421	ENSXCOG00000013552	cnot1	100	89.379	Xiphophorus_couchianus
ENSCLAG00000006289	CNOT1	100	89.463	ENSXMAG00000006031	cnot1	100	89.421	Xiphophorus_maculatus