EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000006298 (Gene tree)
Gene ID: 102014011
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 33789 bases
Position: chrJH721867.1:31270035-31303823
Accession: 102014011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000009016	RRM_1	PF00076.22	2.8e-09	1	1
ENSCLAP00000009017	RRM_1	PF00076.22	2.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009144	SCAF4-201	3459	XM_013504099	ENSCLAP00000009016	1148 (aa)	XP_013359553	UPI00038EC8D8
ENSCLAT00000009145	SCAF4-202	3477	-	ENSCLAP00000009017	1158 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000006298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006298's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006298	SCAF4	100	91.927	ENSG00000156304	SCAF4	99	90.712	Homo_sapiens
ENSCLAG00000006298	SCAF4	50	60.232	ENSAPOG00000019615	scaf4b	53	73.585	Acanthochromis_polyacanthus
ENSCLAG00000006298	SCAF4	72	89.725	ENSAMEG00000014987	SCAF4	96	91.517	Ailuropoda_melanoleuca
ENSCLAG00000006298	SCAF4	100	73.834	ENSAPLG00000002509	SCAF4	81	72.959	Anas_platyrhynchos
ENSCLAG00000006298	SCAF4	95	69.762	ENSACAG00000002569	SCAF4	51	84.146	Anolis_carolinensis
ENSCLAG00000006298	SCAF4	100	91.580	ENSANAG00000037494	SCAF4	99	90.625	Aotus_nancymaae
ENSCLAG00000006298	SCAF4	93	48.661	ENSAMXG00000008585	scaf4a	59	60.455	Astyanax_mexicanus
ENSCLAG00000006298	SCAF4	100	89.236	ENSBTAG00000018855	SCAF4	99	89.323	Bos_taurus
ENSCLAG00000006298	SCAF4	100	91.493	ENSCJAG00000008993	SCAF4	98	92.677	Callithrix_jacchus
ENSCLAG00000006298	SCAF4	100	90.009	ENSCAFG00000008863	SCAF4	99	90.443	Canis_familiaris
ENSCLAG00000006298	SCAF4	100	87.837	ENSCAFG00020026019	SCAF4	100	88.953	Canis_lupus_dingo
ENSCLAG00000006298	SCAF4	100	88.802	ENSCHIG00000008385	SCAF4	99	89.323	Capra_hircus
ENSCLAG00000006298	SCAF4	91	92.247	ENSTSYG00000011344	SCAF4	98	92.423	Carlito_syrichta
ENSCLAG00000006298	SCAF4	100	91.478	ENSCPOG00000012443	SCAF4	99	90.870	Cavia_porcellus
ENSCLAG00000006298	SCAF4	100	91.233	ENSCCAG00000033727	SCAF4	99	90.799	Cebus_capucinus
ENSCLAG00000006298	SCAF4	100	91.667	ENSCATG00000030379	SCAF4	100	91.493	Cercocebus_atys
ENSCLAG00000006298	SCAF4	100	91.927	ENSCSAG00000009438	SCAF4	99	91.580	Chlorocebus_sabaeus
ENSCLAG00000006298	SCAF4	100	91.840	ENSCANG00000029847	SCAF4	99	91.233	Colobus_angolensis_palliatus
ENSCLAG00000006298	SCAF4	100	79.853	ENSCGRG00001020821	Scaf4	99	80.576	Cricetulus_griseus_chok1gshd
ENSCLAG00000006298	SCAF4	100	79.625	ENSCGRG00000014360	Scaf4	100	79.735	Cricetulus_griseus_crigri
ENSCLAG00000006298	SCAF4	100	86.881	ENSDNOG00000019014	SCAF4	93	87.315	Dasypus_novemcinctus
ENSCLAG00000006298	SCAF4	96	78.539	ENSETEG00000000583	SCAF4	99	77.638	Echinops_telfairi
ENSCLAG00000006298	SCAF4	100	90.530	ENSEASG00005007756	SCAF4	99	90.964	Equus_asinus_asinus
ENSCLAG00000006298	SCAF4	100	90.356	ENSECAG00000014248	SCAF4	99	91.051	Equus_caballus
ENSCLAG00000006298	SCAF4	57	51.930	ENSELUG00000002779	SCAF8	59	68.841	Esox_lucius
ENSCLAG00000006298	SCAF4	100	90.182	ENSFCAG00000002228	SCAF4	99	90.704	Felis_catus
ENSCLAG00000006298	SCAF4	100	90.034	ENSFDAG00000017780	SCAF4	100	90.034	Fukomys_damarensis
ENSCLAG00000006298	SCAF4	100	74.525	ENSGALG00000033965	SCAF4	99	71.175	Gallus_gallus
ENSCLAG00000006298	SCAF4	91	89.655	ENSGGOG00000015557	SCAF4	99	91.145	Gorilla_gorilla
ENSCLAG00000006298	SCAF4	100	92.354	ENSHGLG00000010582	SCAF4	99	92.963	Heterocephalus_glaber_female
ENSCLAG00000006298	SCAF4	100	92.354	ENSHGLG00100009441	SCAF4	100	92.963	Heterocephalus_glaber_male
ENSCLAG00000006298	SCAF4	69	56.218	ENSIPUG00000011285	scaf4	61	62.195	Ictalurus_punctatus
ENSCLAG00000006298	SCAF4	100	84.970	ENSSTOG00000004450	SCAF4	100	84.796	Ictidomys_tridecemlineatus
ENSCLAG00000006298	SCAF4	100	88.870	ENSJJAG00000019447	Scaf4	99	89.391	Jaculus_jaculus
ENSCLAG00000006298	SCAF4	95	59.211	ENSLOCG00000009162	scaf4a	58	65.476	Lepisosteus_oculatus
ENSCLAG00000006298	SCAF4	100	90.027	ENSLAFG00000010710	SCAF4	99	89.835	Loxodonta_africana
ENSCLAG00000006298	SCAF4	100	91.594	ENSMFAG00000037668	SCAF4	99	91.681	Macaca_fascicularis
ENSCLAG00000006298	SCAF4	100	91.508	ENSMMUG00000001712	SCAF4	99	91.594	Macaca_mulatta
ENSCLAG00000006298	SCAF4	100	91.515	ENSMNEG00000032966	SCAF4	99	91.688	Macaca_nemestrina
ENSCLAG00000006298	SCAF4	100	91.753	ENSMLEG00000039674	SCAF4	99	91.667	Mandrillus_leucophaeus
ENSCLAG00000006298	SCAF4	100	74.029	ENSMGAG00000014515	SCAF4	99	71.006	Meleagris_gallopavo
ENSCLAG00000006298	SCAF4	100	87.142	ENSMAUG00000013307	Scaf4	100	86.174	Mesocricetus_auratus
ENSCLAG00000006298	SCAF4	100	90.964	ENSMICG00000005256	SCAF4	99	90.877	Microcebus_murinus
ENSCLAG00000006298	SCAF4	100	84.622	ENSMOCG00000012087	Scaf4	94	91.120	Microtus_ochrogaster
ENSCLAG00000006298	SCAF4	100	81.858	ENSMODG00000021040	SCAF4	99	81.337	Monodelphis_domestica
ENSCLAG00000006298	SCAF4	100	82.733	MGP_CAROLIEiJ_G0020944	Scaf4	94	89.642	Mus_caroli
ENSCLAG00000006298	SCAF4	100	82.324	ENSMUSG00000022983	Scaf4	94	89.130	Mus_musculus
ENSCLAG00000006298	SCAF4	100	81.826	MGP_PahariEiJ_G0016649	Scaf4	99	84.316	Mus_pahari
ENSCLAG00000006298	SCAF4	100	83.073	MGP_SPRETEiJ_G0021850	Scaf4	99	81.219	Mus_spretus
ENSCLAG00000006298	SCAF4	100	89.533	ENSMPUG00000001078	SCAF4	99	89.187	Mustela_putorius_furo
ENSCLAG00000006298	SCAF4	99	74.234	ENSMLUG00000011472	SCAF4	77	81.502	Myotis_lucifugus
ENSCLAG00000006298	SCAF4	100	90.113	ENSNGAG00000005214	Scaf4	99	90.286	Nannospalax_galili
ENSCLAG00000006298	SCAF4	100	91.840	ENSNLEG00000003569	SCAF4	99	90.972	Nomascus_leucogenys
ENSCLAG00000006298	SCAF4	79	90.761	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSCLAG00000006298	SCAF4	100	92.586	ENSODEG00000002718	SCAF4	99	92.414	Octodon_degus
ENSCLAG00000006298	SCAF4	100	87.500	ENSOCUG00000008336	SCAF4	99	86.806	Oryctolagus_cuniculus
ENSCLAG00000006298	SCAF4	100	91.615	ENSOGAG00000014653	SCAF4	93	91.990	Otolemur_garnettii
ENSCLAG00000006298	SCAF4	100	88.745	ENSOARG00000013894	SCAF4	98	89.004	Ovis_aries
ENSCLAG00000006298	SCAF4	100	91.927	ENSPPAG00000028535	SCAF4	99	90.712	Pan_paniscus
ENSCLAG00000006298	SCAF4	100	89.922	ENSPPRG00000000635	SCAF4	99	90.356	Panthera_pardus
ENSCLAG00000006298	SCAF4	100	87.489	ENSPTIG00000021578	SCAF4	99	86.061	Panthera_tigris_altaica
ENSCLAG00000006298	SCAF4	100	91.927	ENSPTRG00000013848	SCAF4	99	90.712	Pan_troglodytes
ENSCLAG00000006298	SCAF4	100	91.334	ENSPANG00000017332	SCAF4	99	91.421	Papio_anubis
ENSCLAG00000006298	SCAF4	64	62.252	ENSPKIG00000022408	scaf4a	88	64.414	Paramormyrops_kingsleyae
ENSCLAG00000006298	SCAF4	100	74.394	ENSPSIG00000014242	SCAF4	89	82.569	Pelodiscus_sinensis
ENSCLAG00000006298	SCAF4	61	83.807	ENSPCIG00000028183	SCAF4	91	79.443	Phascolarctos_cinereus
ENSCLAG00000006298	SCAF4	100	92.101	ENSPPYG00000011355	SCAF4	100	90.885	Pongo_abelii
ENSCLAG00000006298	SCAF4	92	93.609	ENSPCAG00000009998	SCAF4	87	93.284	Procavia_capensis
ENSCLAG00000006298	SCAF4	100	92.094	ENSPCOG00000018710	SCAF4	99	91.138	Propithecus_coquereli
ENSCLAG00000006298	SCAF4	100	88.532	ENSPVAG00000005220	SCAF4	99	89.140	Pteropus_vampyrus
ENSCLAG00000006298	SCAF4	76	54.749	ENSPNAG00000016892	scaf4a	58	61.261	Pygocentrus_nattereri
ENSCLAG00000006298	SCAF4	98	84.896	ENSRNOG00000002104	Scaf4	97	84.000	Rattus_norvegicus
ENSCLAG00000006298	SCAF4	100	89.323	ENSRBIG00000040007	SCAF4	58	92.496	Rhinopithecus_bieti
ENSCLAG00000006298	SCAF4	100	91.927	ENSRROG00000029488	SCAF4	99	91.580	Rhinopithecus_roxellana
ENSCLAG00000006298	SCAF4	100	81.826	ENSSHAG00000001581	SCAF4	99	81.130	Sarcophilus_harrisii
ENSCLAG00000006298	SCAF4	67	52.179	ENSSFOG00015006338	scaf4a	54	55.635	Scleropages_formosus
ENSCLAG00000006298	SCAF4	64	58.621	ENSSMAG00000003738	scaf4b	52	72.050	Scophthalmus_maximus
ENSCLAG00000006298	SCAF4	63	57.194	ENSSDUG00000012380	scaf4b	52	71.519	Seriola_dumerili
ENSCLAG00000006298	SCAF4	100	87.251	ENSSARG00000009994	SCAF4	99	86.730	Sorex_araneus
ENSCLAG00000006298	SCAF4	100	89.295	ENSSSCG00000021023	SCAF4	99	89.034	Sus_scrofa
ENSCLAG00000006298	SCAF4	75	78.978	ENSTGUG00000013464	SCAF4	87	86.194	Taeniopygia_guttata
ENSCLAG00000006298	SCAF4	100	88.966	ENSTTRG00000010963	SCAF4	99	89.140	Tursiops_truncatus
ENSCLAG00000006298	SCAF4	100	87.576	ENSUAMG00000008860	SCAF4	99	88.097	Ursus_americanus
ENSCLAG00000006298	SCAF4	100	83.160	ENSUMAG00000016962	SCAF4	100	88.271	Ursus_maritimus
ENSCLAG00000006298	SCAF4	100	90.009	ENSVVUG00000002953	SCAF4	100	90.443	Vulpes_vulpes
ENSCLAG00000006298	SCAF4	99	54.174	ENSXETG00000007351	scaf4	61	60.714	Xenopus_tropicalis